RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 SNAPC3Q92966 411 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 UBE2E2Q96LR5 201 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 HARBI1Q96MB7 349 aa11.95□□□□□ -0.5
RAB4B-202ENST00000378307 NAA50Q9GZZ1 169 aaKnown RBP11.95□□□□□ -0.5
RAB4B-202ENST00000378307 ALX4Q9H161 411 aaPredicted RBP11.95□□□□□ -0.5
RAB4B-202ENST00000378307 A0A0A6YYH2 397 aa11.94□□□□□ -0.5
RAB4B-202ENST00000378307 A6NJ64 397 aa11.94□□□□□ -0.5
RAB4B-202ENST00000378307 RAB25P57735 213 aa11.94□□□□□ -0.5
RAB4B-202ENST00000378307 BRWD1-AS2P59051 145 aa11.94□□□□□ -0.5
RAB4B-202ENST00000378307 EIF4EBP1Q13541 118 aaPredicted RBP11.94□□□□□ -0.5
RAB4B-202ENST00000378307 FHL3Q13643 280 aa11.94□□□□□ -0.5
RAB4B-202ENST00000378307 FXYD3Q14802 87 aa11.94□□□□□ -0.5
RAB4B-202ENST00000378307 AKIRIN2Q53H80 203 aa11.94□□□□□ -0.5
RAB4B-202ENST00000378307 TMEM65Q6PI78 240 aa11.94□□□□□ -0.5
RAB4B-202ENST00000378307 UNQ5815/PRO19632Q6UWF5 114 aa11.94□□□□□ -0.5
RAB4B-202ENST00000378307 OR11H1Q8NG94 326 aa11.94□□□□□ -0.5
RAB4B-202ENST00000378307 SLC25A46Q96AG3 418 aa11.94□□□□□ -0.5
RAB4B-202ENST00000378307 GPHA2Q96T91 129 aa11.94□□□□□ -0.5
RAB4B-202ENST00000378307 DIABLOQ9NR28 239 aa11.94□□□□□ -0.5
RAB4B-202ENST00000378307 FOXA2Q9Y261 457 aaPredicted RBP11.94□□□□□ -0.5
RAB4B-202ENST00000378307 SHOXO15266 292 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 XRCC3O43542 346 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 TMEM127O75204 238 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 DUS4LO95620 317 aaKnown RBP11.93□□□□□ -0.5
RAB4B-202ENST00000378307 CRYZL1O95825 349 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 AADACP22760 399 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 LGALS7P47929 136 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 EGFEM1PQ0D2K5 195 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 UBE2NLQ5JXB2 153 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 IDO2Q6ZQW0 420 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 CROCCP3Q8IVE0 287 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 SAMD12Q8N8I0 201 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 GRPEL2Q8TAA5 225 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 MRAPQ8TCY5 172 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 ARPC1AQ92747 370 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 MS4A10Q96PG2 267 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 VSIG4Q9Y279 399 aa11.93□□□□□ -0.5
RAB4B-202ENST00000378307 RBMX2Q9Y388 322 aaKnown RBP11.93□□□□□ -0.5
RAB4B-202ENST00000378307 WI2-2373I1.2A0A1W2PRP0 233 aa11.92□□□□□ -0.5
RAB4B-202ENST00000378307 K7EIL1 84 aa11.92□□□□□ -0.5
RAB4B-202ENST00000378307 EIF4EP06730 217 aaKnown RBP11.92□□□□□ -0.5
RAB4B-202ENST00000378307 FCGR2CP31995 323 aa11.92□□□□□ -0.5
RAB4B-202ENST00000378307 RUNX1Q01196 453 aa11.92□□□□□ -0.5
RAB4B-202ENST00000378307 TAGLNQ01995 201 aaKnown RBP11.92□□□□□ -0.5
RAB4B-202ENST00000378307 TMEM267Q0VDI3 215 aaPredicted RBP11.92□□□□□ -0.5
RAB4B-202ENST00000378307 RTL8BQ17RB0 113 aa11.92□□□□□ -0.5
RAB4B-202ENST00000378307 ACTBL2Q562R1 376 aa11.92□□□□□ -0.5
RAB4B-202ENST00000378307 OR2B11Q5JQS5 317 aa11.92□□□□□ -0.5
RAB4B-202ENST00000378307 REC114Q7Z4M0 266 aa11.92□□□□□ -0.5
RAB4B-202ENST00000378307 S100A16Q96FQ6 103 aaKnown RBP11.92□□□□□ -0.5
RAB4B-202ENST00000378307 ADTRPQ96IZ2 230 aa11.92□□□□□ -0.5
RAB4B-202ENST00000378307 CCL28Q9NRJ3 127 aa11.92□□□□□ -0.5
RAB4B-202ENST00000378307 FCGR3BO75015 233 aa11.91□□□□□ -0.5
RAB4B-202ENST00000378307 RRASP10301 218 aa11.91□□□□□ -0.5
RAB4B-202ENST00000378307 TAS2R20P59543 309 aa11.91□□□□□ -0.5
RAB4B-202ENST00000378307 ARPC4P59998 168 aa11.91□□□□□ -0.5
RAB4B-202ENST00000378307 TCTEX1D1Q8N7M0 179 aa11.91□□□□□ -0.5
RAB4B-202ENST00000378307 OR5T1Q8NG75 326 aa11.91□□□□□ -0.5
RAB4B-202ENST00000378307 OR1N2Q8NGR9 330 aa11.91□□□□□ -0.5
RAB4B-202ENST00000378307 COMMD3Q9UBI1 195 aa11.91□□□□□ -0.5
RAB4B-202ENST00000378307 CNIH1O95406 144 aa11.9□□□□□ -0.5
RAB4B-202ENST00000378307 APELAP0DMC3 54 aa11.9□□□□□ -0.5
RAB4B-202ENST00000378307 UBE2KP61086 200 aa11.9□□□□□ -0.5
RAB4B-202ENST00000378307 CTF1Q16619 201 aa11.9□□□□□ -0.5
RAB4B-202ENST00000378307 KCTD9Q7L273 389 aa11.9□□□□□ -0.5
RAB4B-202ENST00000378307 OVCH2Q7RTZ1 564 aa11.9□□□□□ -0.5
RAB4B-202ENST00000378307 VKORC1L1Q8N0U8 176 aa11.9□□□□□ -0.5
RAB4B-202ENST00000378307 OR5M8Q8NGP6 311 aa11.9□□□□□ -0.5
RAB4B-202ENST00000378307 SECTM1Q8WVN6 248 aa11.9□□□□□ -0.5
RAB4B-202ENST00000378307 MCRIP2Q9BUT9 160 aaKnown RBP11.9□□□□□ -0.5
RAB4B-202ENST00000378307 TAS2R8Q9NYW2 309 aa11.9□□□□□ -0.5
RAB4B-202ENST00000378307 SCOCQ9UIL1 159 aa11.9□□□□□ -0.5
RAB4B-202ENST00000378307 ANAPC10Q9UM13 185 aa11.9□□□□□ -0.5
RAB4B-202ENST00000378307 IGHV4OR15-8A0A075B7B6 117 aa11.89□□□□□ -0.51
RAB4B-202ENST00000378307 A0A087WW49 117 aa11.89□□□□□ -0.51
RAB4B-202ENST00000378307 TNFSF12O43508 249 aa11.89□□□□□ -0.51
RAB4B-202ENST00000378307 PPYP01298 95 aa11.89□□□□□ -0.51
RAB4B-202ENST00000378307 IGHV3-11P01762 117 aa11.89□□□□□ -0.51
RAB4B-202ENST00000378307 SAA1P0DJI8 122 aaPredicted RBP11.89□□□□□ -0.51
RAB4B-202ENST00000378307 DEFA5Q01523 94 aa11.89□□□□□ -0.51
RAB4B-202ENST00000378307 ZNF616Q08AN1 781 aa11.89□□□□□ -0.51
RAB4B-202ENST00000378307 PRSS8Q16651 343 aa11.89□□□□□ -0.51
RAB4B-202ENST00000378307 TMEM69Q5SWH9 247 aa11.89□□□□□ -0.51
RAB4B-202ENST00000378307 ANKRD13BQ86YJ7 626 aa11.89□□□□□ -0.51
RAB4B-202ENST00000378307 MFSD4AQ8N468 514 aa11.89□□□□□ -0.51
RAB4B-202ENST00000378307 TEX45Q8NA69 505 aa11.89□□□□□ -0.51
RAB4B-202ENST00000378307 OR5AP2Q8NGF4 316 aa11.89□□□□□ -0.51
RAB4B-202ENST00000378307 OSR1Q8TAX0 266 aaPredicted RBP11.89□□□□□ -0.51
RAB4B-202ENST00000378307 ZNF430Q9H8G1 570 aaPredicted RBP11.89□□□□□ -0.51
RAB4B-202ENST00000378307 MSGN1A6NI15 193 aa11.88□□□□□ -0.51
RAB4B-202ENST00000378307 RBMXL2O75526 392 aaKnown RBP11.88□□□□□ -0.51
RAB4B-202ENST00000378307 SLC22A5O76082 557 aa11.88□□□□□ -0.51
RAB4B-202ENST00000378307 GABARAPO95166 117 aa11.88□□□□□ -0.51
RAB4B-202ENST00000378307 CBX5P45973 191 aa11.88□□□□□ -0.51
RAB4B-202ENST00000378307 RFX2P48378 723 aa11.88□□□□□ -0.51
RAB4B-202ENST00000378307 SLURP1P55000 103 aa11.88□□□□□ -0.51
RAB4B-202ENST00000378307 TPPP2P59282 170 aa11.88□□□□□ -0.51
RAB4B-202ENST00000378307 FXYD4P59646 89 aa11.88□□□□□ -0.51
RAB4B-202ENST00000378307 CBX3Q13185 183 aa11.88□□□□□ -0.51
RAB4B-202ENST00000378307 VMA21Q3ZAQ7 101 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms