RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 MC5RP33032 325 aa17.07■□□□□ 0.32
CBWD3-202ENST00000377342 SGPP2Q8IWX5 399 aa17.07■□□□□ 0.32
CBWD3-202ENST00000377342 RITA1Q96K30 269 aa17.07■□□□□ 0.32
CBWD3-202ENST00000377342 A0A0B4J293 547 aa17.06■□□□□ 0.32
CBWD3-202ENST00000377342 INMT-MINDY4F8WBC2 141 aa17.06■□□□□ 0.32
CBWD3-202ENST00000377342 H7C2Y5 167 aa17.06■□□□□ 0.32
CBWD3-202ENST00000377342 RBFOX2O43251 390 aaKnown RBP eCLIP17.06■□□□□ 0.32
CBWD3-202ENST00000377342 CRLF1O75462 422 aa17.06■□□□□ 0.32
CBWD3-202ENST00000377342 CRYZL1O95825 349 aa17.06■□□□□ 0.32
CBWD3-202ENST00000377342 IGHV4-59P01825 116 aa17.06■□□□□ 0.32
CBWD3-202ENST00000377342 KIR2DS2P43631 304 aa17.06■□□□□ 0.32
CBWD3-202ENST00000377342 IER3P46695 156 aa17.06■□□□□ 0.32
CBWD3-202ENST00000377342 TAGLNQ01995 201 aaKnown RBP17.06■□□□□ 0.32
CBWD3-202ENST00000377342 DHRS2Q13268 280 aa17.06■□□□□ 0.32
CBWD3-202ENST00000377342 EBI3Q14213 229 aa17.06■□□□□ 0.32
CBWD3-202ENST00000377342 RTL8BQ17RB0 113 aa17.06■□□□□ 0.32
CBWD3-202ENST00000377342 Q8N6K4 173 aa17.06■□□□□ 0.32
CBWD3-202ENST00000377342 VAMP1P23763 118 aa17.05■□□□□ 0.32
CBWD3-202ENST00000377342 UCP1P25874 307 aa17.05■□□□□ 0.32
CBWD3-202ENST00000377342 RAG2P55895 527 aa17.05■□□□□ 0.32
CBWD3-202ENST00000377342 TRIM16LQ309B1 348 aa17.05■□□□□ 0.32
CBWD3-202ENST00000377342 TCTEX1D1Q8N7M0 179 aa17.05■□□□□ 0.32
CBWD3-202ENST00000377342 OR52B4Q8NGK2 314 aa17.05■□□□□ 0.32
CBWD3-202ENST00000377342 OR4S2Q8NH73 311 aa17.05■□□□□ 0.32
CBWD3-202ENST00000377342 GLYATL2Q8WU03 294 aa17.05■□□□□ 0.32
CBWD3-202ENST00000377342 ZDHHC16Q969W1 377 aa17.05■□□□□ 0.32
CBWD3-202ENST00000377342 EAF1Q96JC9 268 aaPredicted RBP17.05■□□□□ 0.32
CBWD3-202ENST00000377342 SEC22CQ9BRL7 303 aa17.05■□□□□ 0.32
CBWD3-202ENST00000377342 TMEM222Q9H0R3 208 aa17.05■□□□□ 0.32
CBWD3-202ENST00000377342 C9orf170A2RU37 121 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 S1PR2O95136 353 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 SFT2D2O95562 160 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 IGKV1-39P01597 117 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 HLA-AP01891 365 aaKnown RBP17.04■□□□□ 0.32
CBWD3-202ENST00000377342 IGKV1D-39P04432 117 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 TMEM187Q14656 261 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 SLC9A3R2Q15599 337 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 TMEM177Q53S58 311 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 DHRS7BQ6IAN0 325 aaPredicted RBP17.04■□□□□ 0.32
CBWD3-202ENST00000377342 THNSL2Q86YJ6 484 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 LHFPL5Q8TAF8 219 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 FAM212BQ9NTI7 297 aaPredicted RBP17.04■□□□□ 0.32
CBWD3-202ENST00000377342 TCF19Q9Y242 345 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 HOXA3O43365 443 aaPredicted RBP17.04■□□□□ 0.32
CBWD3-202ENST00000377342 FAM157CP0CG43 387 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 RRASP10301 218 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 SCGB2A2Q13296 93 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 C4orf46Q504U0 113 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 LYG2Q86SG7 212 aa17.04■□□□□ 0.32
CBWD3-202ENST00000377342 NIPBLQ6KC79 2804 aaeCLIP17.03■□□□□ 0.32
CBWD3-202ENST00000377342 MOSP00540 346 aa17.03■□□□□ 0.32
CBWD3-202ENST00000377342 IFNA2P01563 188 aa17.03■□□□□ 0.32
CBWD3-202ENST00000377342 CNTFRP26992 372 aa17.03■□□□□ 0.32
CBWD3-202ENST00000377342 LPAR6P43657 344 aa17.03■□□□□ 0.32
CBWD3-202ENST00000377342 HES1Q14469 280 aa17.03■□□□□ 0.32
CBWD3-202ENST00000377342 ANKRD55Q3KP44 614 aa17.03■□□□□ 0.32
CBWD3-202ENST00000377342 OR4C13Q8NGP0 309 aa17.03■□□□□ 0.32
CBWD3-202ENST00000377342 OR2T10Q8NGZ9 312 aa17.03■□□□□ 0.32
CBWD3-202ENST00000377342 CD300LFQ8TDQ1 290 aa17.03■□□□□ 0.32
CBWD3-202ENST00000377342 A6NDX4 124 aa17.02■□□□□ 0.32
CBWD3-202ENST00000377342 SRRM4A7MD48 611 aaKnown RBP17.02■□□□□ 0.32
CBWD3-202ENST00000377342 B3GALNT1O75752 331 aa17.02■□□□□ 0.32
CBWD3-202ENST00000377342 IL5P05113 134 aa17.02■□□□□ 0.32
CBWD3-202ENST00000377342 FAM106CPP0CH98 169 aa17.02■□□□□ 0.32
CBWD3-202ENST00000377342 HNF4GQ14541 408 aa17.02■□□□□ 0.32
CBWD3-202ENST00000377342 LY6EQ16553 131 aa17.02■□□□□ 0.32
CBWD3-202ENST00000377342 MINDY2Q8NBR6 621 aa17.02■□□□□ 0.32
CBWD3-202ENST00000377342 CASTOR1Q8WTX7 329 aa17.02■□□□□ 0.32
CBWD3-202ENST00000377342 SSMEM1Q8WWF3 244 aa17.02■□□□□ 0.32
CBWD3-202ENST00000377342 FLYWCH2Q96CP2 140 aaKnown RBP17.02■□□□□ 0.32
CBWD3-202ENST00000377342 HARBI1Q96MB7 349 aa17.02■□□□□ 0.32
CBWD3-202ENST00000377342 PLEKHA2Q9HB19 425 aa17.02■□□□□ 0.32
CBWD3-202ENST00000377342 CDS2O95674 445 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 HPRT1P00492 218 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 IGLV2-23P01705 113 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 TMEM11P17152 192 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 LIAT1Q6ZQX7 453 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 TMEM219Q86XT9 240 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 OSR1Q8TAX0 266 aaPredicted RBP17.01■□□□□ 0.31
CBWD3-202ENST00000377342 ESM1Q9NQ30 184 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 COMMD9Q9P000 198 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 TNCP24821 2201 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 CHST1O43916 411 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 SERPINE2P07093 398 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 CBX3Q13185 183 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 OR5R1Q8NH85 324 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 TMEM56Q96MV1 263 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 PLSCR3Q9NRY6 295 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 VPREB3Q9UKI3 123 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 KCNIP3Q9Y2W7 256 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 TMEM56-RWDD3S4R434 201 aa17.01■□□□□ 0.31
CBWD3-202ENST00000377342 DNAJC9-AS1A6NH13 148 aa17■□□□□ 0.31
CBWD3-202ENST00000377342 SHOXO15266 292 aa17■□□□□ 0.31
CBWD3-202ENST00000377342 DUS4LO95620 317 aaKnown RBP17■□□□□ 0.31
CBWD3-202ENST00000377342 F2RL1P55085 397 aa17■□□□□ 0.31
CBWD3-202ENST00000377342 TATDN3Q17R31 274 aa17■□□□□ 0.31
CBWD3-202ENST00000377342 VKORC1L1Q8N0U8 176 aa17■□□□□ 0.31
CBWD3-202ENST00000377342 DUX5Q96PT3 197 aa17■□□□□ 0.31
CBWD3-202ENST00000377342 NF1P21359 2839 aa17■□□□□ 0.31
CBWD3-202ENST00000377342 PLXNB1O43157 2135 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms