RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ZNF665Q9H7R5 613 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 SMG1Q96Q15 3661 aaKnown RBP16.73■□□□□ 0.27
VSX1-202ENST00000376709 HCFC1P51610 2035 aa16.73■□□□□ 0.27
VSX1-202ENST00000376709 C7orf77A4D0Y5 90 aa16.73■□□□□ 0.27
VSX1-202ENST00000376709 COLCA2A8K830 154 aa16.73■□□□□ 0.27
VSX1-202ENST00000376709 CRYBA1P05813 215 aa16.73■□□□□ 0.27
VSX1-202ENST00000376709 RAB7AP51149 207 aa16.73■□□□□ 0.27
VSX1-202ENST00000376709 ADIPOQQ15848 244 aa16.73■□□□□ 0.27
VSX1-202ENST00000376709 SSX9Q7RTT3 188 aa16.73■□□□□ 0.27
VSX1-202ENST00000376709 SAV1Q9H4B6 383 aaPredicted RBP16.73■□□□□ 0.27
VSX1-202ENST00000376709 SLC31A2O15432 143 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 CD55P08174 381 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 CGB3P0DN86 165 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 CGB7P0DN87 165 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 TNFRSF1AP19438 455 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 CEBPGP53567 150 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 OR2B8PP59922 312 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 SP5Q6BEB4 398 aaPredicted RBP16.72■□□□□ 0.27
VSX1-202ENST00000376709 TGIF2LYQ8IUE0 185 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 FAM216BQ8N7L0 139 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 OR10P1Q8NGE3 313 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 S1PR3Q99500 378 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 UNKLQ9H9P5 680 aaKnown RBP16.72■□□□□ 0.27
VSX1-202ENST00000376709 JKAMPQ9P055 326 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 IFNA17P01571 189 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 THBDP07204 575 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 DAOP14920 347 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 ELLP55199 621 aaPredicted RBP16.72■□□□□ 0.27
VSX1-202ENST00000376709 ERVK-16P61578 105 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 PRAMEF5Q5TYX0 476 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 KDF1Q8NAX2 398 aaPredicted RBP16.72■□□□□ 0.27
VSX1-202ENST00000376709 CLDND2Q8NHS1 167 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 PINX1Q96BK5 328 aaKnown RBP16.72■□□□□ 0.27
VSX1-202ENST00000376709 QTRT1Q9BXR0 403 aaKnown RBP16.72■□□□□ 0.27
VSX1-202ENST00000376709 GFOD1Q9NXC2 390 aa16.72■□□□□ 0.27
VSX1-202ENST00000376709 TRAV1-1A0A0B4J248 108 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 A0A1W2PPE3 182 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 SCAF4O95104 1147 aaKnown RBP16.71■□□□□ 0.27
VSX1-202ENST00000376709 OR9G9P0C7N8 305 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 HNF4GQ14541 408 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 ATP6V1FQ16864 119 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 AVPI1Q5T686 147 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 ADAM5Q6NVV9 412 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 ZNF788Q6ZQV5 615 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 DCAF16Q9NXF7 216 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 C17orf100A8MU93 164 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 RBFOX2O43251 390 aaKnown RBP eCLIP16.71■□□□□ 0.27
VSX1-202ENST00000376709 RPS16P62249 146 aaKnown RBP16.71■□□□□ 0.27
VSX1-202ENST00000376709 RBPJQ06330 500 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 ICAM4Q14773 271 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 TMEM41BQ5BJD5 291 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 ZNF506Q5JVG8 444 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 UTF1Q5T230 341 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 LCN15Q6UWW0 184 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 DIRC2Q96SL1 478 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 TMEM147Q9BVK8 224 aa16.71■□□□□ 0.27
VSX1-202ENST00000376709 PUS1Q9Y606 427 aaKnown RBP eCLIP16.71■□□□□ 0.27
VSX1-202ENST00000376709 ZNF787Q6DD87 383 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 SSX8Q7RTT4 187 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 VKORC1L1Q8N0U8 176 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 ZCCHC24Q8N2G6 241 aaKnown RBP16.7■□□□□ 0.26
VSX1-202ENST00000376709 OR4A16Q8NH70 328 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 GNG13Q9P2W3 67 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 ROS1P08922 2347 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 ITGB1BP1O14713 200 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 TMPRSS2O15393 492 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 HSPB1P04792 205 aaKnown RBP16.7■□□□□ 0.26
VSX1-202ENST00000376709 KIR2DS2P43631 304 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 UCNP55089 124 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 RHEBQ15382 184 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 CT45A1Q5HYN5 189 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 TEX36Q5VZQ5 186 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 ZFP82Q8N141 532 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 C15orf54Q8N8G6 183 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 CT45A3Q8NHU0 189 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 ISOC2Q96AB3 205 aa16.7■□□□□ 0.26
VSX1-202ENST00000376709 RCC1LQ96I51 464 aaKnown RBP16.7■□□□□ 0.26
VSX1-202ENST00000376709 SAA2-SAA4A0A096LPE2 208 aa16.69■□□□□ 0.26
VSX1-202ENST00000376709 FAM90A9PA6NNJ1 464 aa16.69■□□□□ 0.26
VSX1-202ENST00000376709 SRP19P09132 144 aaKnown RBP16.69■□□□□ 0.26
VSX1-202ENST00000376709 SAA2P0DJI9 122 aaPredicted RBP16.69■□□□□ 0.26
VSX1-202ENST00000376709 NQO2P16083 231 aa16.69■□□□□ 0.26
VSX1-202ENST00000376709 RAB13P51153 203 aa16.69■□□□□ 0.26
VSX1-202ENST00000376709 ZNF726P1Q15940 193 aa16.69■□□□□ 0.26
VSX1-202ENST00000376709 C2CD4CQ8TF44 421 aa16.69■□□□□ 0.26
VSX1-202ENST00000376709 RND1Q92730 232 aa16.69■□□□□ 0.26
VSX1-202ENST00000376709 TIMM9Q9Y5J7 89 aa16.69■□□□□ 0.26
VSX1-202ENST00000376709 PMS2P5A8MQ11 134 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 PAX6P26367 422 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 FGF8P55075 233 aaPredicted RBP16.68■□□□□ 0.26
VSX1-202ENST00000376709 KHDC3LQ587J8 217 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 TCF23Q7RTU1 214 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 CYB561D1Q8N8Q1 229 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 OR4S2Q8NH73 311 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 YLPM1P49750 1951 aaKnown RBP16.68■□□□□ 0.26
VSX1-202ENST00000376709 NKX6-3A6NJ46 265 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 ZFP92A6NM28 416 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 ZNF729A6NN14 1252 aaPredicted RBP16.68■□□□□ 0.26
VSX1-202ENST00000376709 FBP1P09467 338 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 NDUFB7P17568 137 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms