RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 MMP9P14780 707 aa17.29■□□□□ 0.36
HLA-C-201ENST00000376228 CCL3L1P16619 93 aa17.29■□□□□ 0.36
HLA-C-201ENST00000376228 KIR2DS2P43631 304 aa17.29■□□□□ 0.36
HLA-C-201ENST00000376228 NKX2-1P43699 371 aaPredicted RBP17.29■□□□□ 0.36
HLA-C-201ENST00000376228 UTF1Q5T230 341 aa17.29■□□□□ 0.36
HLA-C-201ENST00000376228 BTNL3Q6UXE8 466 aa17.29■□□□□ 0.36
HLA-C-201ENST00000376228 SPAG16Q8N0X2 631 aa17.29■□□□□ 0.36
HLA-C-201ENST00000376228 ADTRPQ96IZ2 230 aa17.29■□□□□ 0.36
HLA-C-201ENST00000376228 C11orf1Q9H5F2 150 aa17.29■□□□□ 0.36
HLA-C-201ENST00000376228 MMP24Q9Y5R2 645 aa17.29■□□□□ 0.36
HLA-C-201ENST00000376228 A0A0G2JRQ6 117 aa17.28■□□□□ 0.36
HLA-C-201ENST00000376228 KANTRA0A1W2PQU2 76 aa17.28■□□□□ 0.36
HLA-C-201ENST00000376228 F5H0A9 414 aaPredicted RBP17.28■□□□□ 0.36
HLA-C-201ENST00000376228 CD5LO43866 347 aa17.28■□□□□ 0.36
HLA-C-201ENST00000376228 IFNA7P01567 189 aa17.28■□□□□ 0.36
HLA-C-201ENST00000376228 P0C879 139 aa17.28■□□□□ 0.36
HLA-C-201ENST00000376228 NDUFA5Q16718 116 aa17.28■□□□□ 0.36
HLA-C-201ENST00000376228 AVPI1Q5T686 147 aa17.28■□□□□ 0.36
HLA-C-201ENST00000376228 WDR25Q64LD2 544 aaPredicted RBP17.28■□□□□ 0.36
HLA-C-201ENST00000376228 PATZ1Q9HBE1 687 aaKnown RBP17.28■□□□□ 0.36
HLA-C-201ENST00000376228 LSM5Q9Y4Y9 91 aaKnown RBP17.28■□□□□ 0.36
HLA-C-201ENST00000376228 HIVEP2P31629 2446 aa17.28■□□□□ 0.36
HLA-C-201ENST00000376228 SVEP1Q4LDE5 3571 aa17.27■□□□□ 0.36
HLA-C-201ENST00000376228 A0A1W2PPH5 198 aa17.27■□□□□ 0.36
HLA-C-201ENST00000376228 NCR3LG1Q68D85 454 aa17.27■□□□□ 0.36
HLA-C-201ENST00000376228 C11orf42Q8N5U0 333 aa17.27■□□□□ 0.36
HLA-C-201ENST00000376228 DDB2Q92466 427 aa17.27■□□□□ 0.36
HLA-C-201ENST00000376228 YAE1D1Q9NRH1 226 aa17.27■□□□□ 0.36
HLA-C-201ENST00000376228 PRELID3BQ9Y3B1 194 aa17.27■□□□□ 0.36
HLA-C-201ENST00000376228 M0R1X1 148 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 RAMP3O60896 148 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 SCGB1D2O95969 90 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 IGHV4-31P0DP07 118 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 P2RY1P47900 373 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 THBS3P49746 956 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 AKR1C2P52895 323 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 AP2S1P53680 142 aaPredicted RBP17.26■□□□□ 0.35
HLA-C-201ENST00000376228 LY6G5BQ8NDX9 201 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 DMBX1Q8NFW5 382 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 LEAP2Q969E1 77 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 ARPC5LQ9BPX5 153 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 NARFLQ9H6Q4 476 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 RCL1Q9Y2P8 373 aaKnown RBP17.26■□□□□ 0.35
HLA-C-201ENST00000376228 ABCA2Q9BZC7 2435 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 SAA2-SAA4A0A096LPE2 208 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 KIAA1324LA8MWY0 1029 aaPredicted RBP17.26■□□□□ 0.35
HLA-C-201ENST00000376228 SAA2P0DJI9 122 aaPredicted RBP17.26■□□□□ 0.35
HLA-C-201ENST00000376228 HKR1P10072 659 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 ARHGDIBP52566 201 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 RPL39P5Q59GN2 51 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 GPR157Q5UAW9 335 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 FAM71F2Q6NXP2 309 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 RNASE11Q8TAA1 199 aaKnown RBP17.26■□□□□ 0.35
HLA-C-201ENST00000376228 S1PR3Q99500 378 aa17.26■□□□□ 0.35
HLA-C-201ENST00000376228 MSGN1A6NI15 193 aa17.25■□□□□ 0.35
HLA-C-201ENST00000376228 FAM90A26D6RGX4 464 aa17.25■□□□□ 0.35
HLA-C-201ENST00000376228 HPRT1P00492 218 aa17.25■□□□□ 0.35
HLA-C-201ENST00000376228 IGHV3-7P01780 117 aa17.25■□□□□ 0.35
HLA-C-201ENST00000376228 IGHV1-8P0DP01 117 aa17.25■□□□□ 0.35
HLA-C-201ENST00000376228 RPL12P30050 165 aaKnown RBP17.25■□□□□ 0.35
HLA-C-201ENST00000376228 GPR6P46095 362 aaPredicted RBP17.25■□□□□ 0.35
HLA-C-201ENST00000376228 UBA52P62987 128 aaKnown RBP17.25■□□□□ 0.35
HLA-C-201ENST00000376228 Q6ZRM9 215 aa17.25■□□□□ 0.35
HLA-C-201ENST00000376228 C1orf229Q6ZS94 237 aaPredicted RBP17.25■□□□□ 0.35
HLA-C-201ENST00000376228 FOXRED2Q8IWF2 684 aa17.25■□□□□ 0.35
HLA-C-201ENST00000376228 LYG1Q8N1E2 194 aa17.25■□□□□ 0.35
HLA-C-201ENST00000376228 SESN1Q9Y6P5 492 aa17.25■□□□□ 0.35
HLA-C-201ENST00000376228 SONP18583 2426 aaKnown RBP17.24■□□□□ 0.35
HLA-C-201ENST00000376228 FAM90A9PA6NNJ1 464 aa17.24■□□□□ 0.35
HLA-C-201ENST00000376228 TAAR5O14804 337 aa17.24■□□□□ 0.35
HLA-C-201ENST00000376228 S1PR2O95136 353 aa17.24■□□□□ 0.35
HLA-C-201ENST00000376228 CFDP00746 253 aaPredicted RBP17.24■□□□□ 0.35
HLA-C-201ENST00000376228 PVALBP20472 110 aaPredicted RBP17.24■□□□□ 0.35
HLA-C-201ENST00000376228 EXOSC2Q13868 293 aaKnown RBP17.24■□□□□ 0.35
HLA-C-201ENST00000376228 CXorf66Q5JRM2 361 aaPredicted RBP17.24■□□□□ 0.35
HLA-C-201ENST00000376228 ZNF833PQ6ZTB9 187 aa17.24■□□□□ 0.35
HLA-C-201ENST00000376228 TNFRSF14Q92956 283 aa17.24■□□□□ 0.35
HLA-C-201ENST00000376228 CACNG5Q9UF02 275 aa17.24■□□□□ 0.35
HLA-C-201ENST00000376228 CUBNO60494 3623 aa17.23■□□□□ 0.35
HLA-C-201ENST00000376228 A0A1W2PPE3 182 aa17.23■□□□□ 0.35
HLA-C-201ENST00000376228 GNG10P50151 68 aa17.23■□□□□ 0.35
HLA-C-201ENST00000376228 ZNF137PP52743 207 aa17.23■□□□□ 0.35
HLA-C-201ENST00000376228 ZNF816Q0VGE8 651 aaPredicted RBP17.23■□□□□ 0.35
HLA-C-201ENST00000376228 OR9G1Q8NH87 305 aa17.23■□□□□ 0.35
HLA-C-201ENST00000376228 UBQLN2Q9UHD9 624 aa17.23■□□□□ 0.35
HLA-C-201ENST00000376228 PPIAL4CA0A0B4J2A2 164 aa17.22■□□□□ 0.35
HLA-C-201ENST00000376228 J3QR06 171 aa17.22■□□□□ 0.35
HLA-C-201ENST00000376228 PPIAL4GP0DN37 164 aa17.22■□□□□ 0.35
HLA-C-201ENST00000376228 MIDNQ504T8 468 aa17.22■□□□□ 0.35
HLA-C-201ENST00000376228 CYB5R2Q6BCY4 276 aa17.22■□□□□ 0.35
HLA-C-201ENST00000376228 STOML3Q8TAV4 291 aa17.22■□□□□ 0.35
HLA-C-201ENST00000376228 TMEM133Q9H2Q1 129 aa17.22■□□□□ 0.35
HLA-C-201ENST00000376228 TOR1AO14656 332 aa17.21■□□□□ 0.35
HLA-C-201ENST00000376228 KCNAB3O43448 404 aa17.21■□□□□ 0.35
HLA-C-201ENST00000376228 GPR137BO60478 399 aa17.21■□□□□ 0.35
HLA-C-201ENST00000376228 FCGR3BO75015 233 aa17.21■□□□□ 0.35
HLA-C-201ENST00000376228 EPHA1P21709 976 aa17.21■□□□□ 0.35
HLA-C-201ENST00000376228 LINC00205P59089 165 aa17.21■□□□□ 0.35
HLA-C-201ENST00000376228 ERVFRD-1P60508 538 aa17.21■□□□□ 0.35
HLA-C-201ENST00000376228 POLR2GP62487 172 aaKnown RBP eCLIP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms