RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 KIR2DS2P43631 304 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 LPAR6P43657 344 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 SRSF4Q08170 494 aaKnown RBP8.48□□□□□ -1.05
PDPN-203ENST00000376061 ZNF816Q0VGE8 651 aaPredicted RBP8.48□□□□□ -1.05
PDPN-203ENST00000376061 NMSQ5H8A3 153 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 GSG1LQ6UXU4 331 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 TGIF2LXQ8IUE1 241 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 PDZD9Q8IXQ8 264 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 LINC01356Q8N9X3 169 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 WFDC11Q8NEX6 87 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 OR10C1Q96KK4 312 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 NABP2Q9BQ15 211 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 PRELID3BQ9Y3B1 194 aa8.48□□□□□ -1.05
PDPN-203ENST00000376061 A0A0G2JRQ6 117 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 C13orf42A0A1B0GVH6 325 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 A0A1W2PRD5 423 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 A0A1W2PRF3 423 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 A0A1W2PRM7 423 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 C5orf51A6NDU8 294 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 G3V3Q6 166 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 H0YJW9 148 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 SMLR1H3BR10 107 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 IFNA21P01568 189 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 IGKV1-5P01602 117 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 IGHV4-31P0DP07 118 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 RPA2P15927 270 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 HTR1DP28221 377 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 RAP2BP61225 183 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 TMEM249Q2WGJ8 235 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 TPTE2P1Q5T6R2 138 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 OR5AN1Q8NGI8 311 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 OR4S2Q8NH73 311 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 CD300LFQ8TDQ1 290 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 ASB13Q8WXK3 278 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 LHX4Q969G2 390 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 SEC22AQ96IW7 307 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 PDCD10Q9BUL8 212 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 HIF1ANQ9NWT6 349 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 TMED3Q9Y3Q3 217 aa8.47□□□□□ -1.05
PDPN-203ENST00000376061 FLNAP21333 2647 aaKnown RBP8.46□□□□□ -1.05
PDPN-203ENST00000376061 PIGBOS1A0A0B4J2F0 54 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 A0A1W2PPI3 338 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 LEUTXA8MZ59 168 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 TXNL1O43396 289 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 CRYZL1O95825 349 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 APOA2P02652 100 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 HNRNPCP07910 306 aaKnown RBP eCLIP8.46□□□□□ -1.06
PDPN-203ENST00000376061 VDAC1P21796 283 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 GATA3P23771 443 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 UBE2E1P51965 193 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 AKR1C2P52895 323 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 RTL8BQ17RB0 113 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 IAH1Q2TAA2 248 aaPredicted RBP8.46□□□□□ -1.06
PDPN-203ENST00000376061 DHRS7BQ6IAN0 325 aaPredicted RBP8.46□□□□□ -1.06
PDPN-203ENST00000376061 LHFPL4Q7Z7J7 247 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 OR2T35Q8NGX2 323 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 RPEQ96AT9 228 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 PPP1R14BQ96C90 147 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 RBMXL1Q96E39 390 aaKnown RBP8.46□□□□□ -1.06
PDPN-203ENST00000376061 C2orf50Q96LR7 162 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 PLEKHA2Q9HB19 425 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 SLC35D1Q9NTN3 355 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 COMMD9Q9P000 198 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 DPM3Q9P2X0 92 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 AUP1Q9Y679 476 aa8.46□□□□□ -1.06
PDPN-203ENST00000376061 TRAV40A0A0B4J280 105 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 IGHV1-3A0A0C4DH29 117 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 CENPVL3A0A0U1RRI6 287 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 NPFFO15130 113 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 GAPDHP04406 335 aaKnown RBP8.45□□□□□ -1.06
PDPN-203ENST00000376061 IGKV1-16P04430 117 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 P0C879 139 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 EPHA1P21709 976 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 G6PCP35575 357 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 CEACAM3P40198 252 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 GZMKP49863 264 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 IZUMO4Q1ZYL8 232 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 ZFP69Q49AA0 526 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 Q5BKY6 102 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 MINOS1Q5TGZ0 78 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 ZBTB8BQ8NAP8 495 aaPredicted RBP8.45□□□□□ -1.06
PDPN-203ENST00000376061 RNASE11Q8TAA1 199 aaKnown RBP8.45□□□□□ -1.06
PDPN-203ENST00000376061 LSM10Q969L4 123 aaKnown RBP8.45□□□□□ -1.06
PDPN-203ENST00000376061 R3HDM4Q96D70 268 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 SPIN2AQ99865 258 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 SPIN2BQ9BPZ2 258 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 NMES1Q9C002 83 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 C7orf69Q9H7B7 122 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 WASHC3Q9Y3C0 194 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 TBL2Q9Y4P3 447 aaKnown RBP8.45□□□□□ -1.06
PDPN-203ENST00000376061 MMP24Q9Y5R2 645 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 MINOS1-NBL1R4GNA1 71 aa8.45□□□□□ -1.06
PDPN-203ENST00000376061 CELSR1Q9NYQ6 3014 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 TRAV14DV4A0A0A6YYC5 116 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 IGHV3-72A0A0B4J1Y9 119 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 IGHV1-69DA0A0B4J2H0 117 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 MARCH11A6NNE9 402 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 H7C2Y5 167 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 J3QLI3 93 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 HPRT1P00492 218 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms