RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 XKRY2A2RUG3 117 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 RNF212BA8MTL3 300 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.91□□□□□ -1.3
UBR4-202ENST00000375224 GLI4P10075 376 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 SLC25A6P12236 298 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 CCKARP32238 428 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 OCIAD2Q56VL3 154 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 RPL7L1Q6DKI1 246 aaKnown RBP6.91□□□□□ -1.3
UBR4-202ENST00000375224 ACP7Q6ZNF0 438 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 COMMD1Q8N668 190 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 OR52M1Q8NGK5 317 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 CIB3Q96Q77 187 aaPredicted RBP6.91□□□□□ -1.3
UBR4-202ENST00000375224 RCL1Q9Y2P8 373 aaKnown RBP6.91□□□□□ -1.3
UBR4-202ENST00000375224 NKX2-6A6NCS4 301 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 C9JQL5 133 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 CRYAAP02489 173 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 OR5G3P0C626 314 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 NBEAP1P0C6P0 100 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 SPINK2P20155 84 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 MAS1LP35410 378 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 PMS2P11Q13670 270 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 C11orf53Q8IXP5 236 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 ZBTB34Q8NCN2 500 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 MIEN1Q9BRT3 115 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 FAM215AQ9Y5M1 114 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 OOEPA6NGQ2 149 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 C1QTNF9BB2RNN3 333 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 SERPINE2P07093 398 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 SNCAP37840 140 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 RIPPLY3P57055 190 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 TRAT1Q6PIZ9 186 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 WDR82Q6UXN9 313 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 SLC35B3Q9H1N7 401 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 PLEKHF2Q9H8W4 249 aa6.91□□□□□ -1.3
UBR4-202ENST00000375224 ZNF727A8MUV8 499 aa6.9□□□□□ -1.3
UBR4-202ENST00000375224 PRH1P02810 166 aa6.9□□□□□ -1.3
UBR4-202ENST00000375224 FAM157CP0CG43 387 aa6.9□□□□□ -1.3
UBR4-202ENST00000375224 GLRXP35754 106 aa6.9□□□□□ -1.3
UBR4-202ENST00000375224 LPAR6P43657 344 aa6.9□□□□□ -1.3
UBR4-202ENST00000375224 SULT1A2P50226 295 aa6.9□□□□□ -1.3
UBR4-202ENST00000375224 IGFBP7Q16270 282 aa6.9□□□□□ -1.3
UBR4-202ENST00000375224 ZNF474Q6S9Z5 364 aaPredicted RBP6.9□□□□□ -1.3
UBR4-202ENST00000375224 SLC35E3Q7Z769 313 aa6.9□□□□□ -1.3
UBR4-202ENST00000375224 FAM90A1Q86YD7 464 aa6.9□□□□□ -1.3
UBR4-202ENST00000375224 Q8WTZ3 238 aa6.9□□□□□ -1.3
UBR4-202ENST00000375224 GALMQ96C23 342 aa6.9□□□□□ -1.3
UBR4-202ENST00000375224 LIN7CQ9NUP9 197 aaKnown RBP6.9□□□□□ -1.3
UBR4-202ENST00000375224 HSPB7Q9UBY9 170 aa6.9□□□□□ -1.3
UBR4-202ENST00000375224 TGIF2-C20orf24A0A0A6YYL0 155 aa6.9□□□□□ -1.31
UBR4-202ENST00000375224 M0R1B8 84 aa6.9□□□□□ -1.31
UBR4-202ENST00000375224 ADAM20O43506 726 aa6.9□□□□□ -1.31
UBR4-202ENST00000375224 ZNF83P51522 516 aa6.9□□□□□ -1.31
UBR4-202ENST00000375224 MST1LQ2TV78 715 aa6.9□□□□□ -1.31
UBR4-202ENST00000375224 NMSQ5H8A3 153 aa6.9□□□□□ -1.31
UBR4-202ENST00000375224 ZNF343Q6P1L6 599 aa6.9□□□□□ -1.31
UBR4-202ENST00000375224 Q6ZR03 302 aa6.9□□□□□ -1.31
UBR4-202ENST00000375224 OR1P1Q8NH06 330 aa6.9□□□□□ -1.31
UBR4-202ENST00000375224 PPP1R35Q8TAP8 253 aa6.9□□□□□ -1.31
UBR4-202ENST00000375224 WFDC12Q8WWY7 111 aa6.9□□□□□ -1.31
UBR4-202ENST00000375224 RNF150Q9ULK6 438 aa6.9□□□□□ -1.31
UBR4-202ENST00000375224 A0A1B0GU03 582 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 PPP5D1E7EU14 171 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 PRRG2O14669 202 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 IGHV3-13P01766 116 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 CLEC3BP05452 202 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 SEC11BP0C7V7 166 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 MSMO1Q15800 293 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 FBLN7Q53RD9 439 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 SSX8Q7RTT4 187 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 OR2C3Q8N628 320 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 NINJ1Q92982 152 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 LSM10Q969L4 123 aaKnown RBP6.89□□□□□ -1.31
UBR4-202ENST00000375224 PARP11Q9NR21 331 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 OR1A1Q9P1Q5 309 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 VAX2Q9UIW0 290 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 FREM2Q5SZK8 3169 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 OR8U9P0C7N5 309 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 ID3Q02535 119 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 TESK1Q15569 626 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 SAMD13Q5VXD3 122 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 PRAMEF6Q5VXH4 476 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 ZNF826PQ6ZT77 177 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 FAM219AQ8IW50 185 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 CST9LQ9H4G1 147 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 HEATR1Q9H583 2144 aaKnown RBP6.89□□□□□ -1.31
UBR4-202ENST00000375224 NAGKQ9UJ70 344 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 CHD3Q12873 2000 aaKnown RBP6.89□□□□□ -1.31
UBR4-202ENST00000375224 MAP1BP46821 2468 aaKnown RBP6.89□□□□□ -1.31
UBR4-202ENST00000375224 TNFSF12O43508 249 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 CXCL1P09341 107 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 GZMHP20718 246 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 CFHR2P36980 270 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 ZNF266Q14584 549 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 ELOBQ15370 118 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 TMEM183BQ1AE95 376 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 OR2Z1Q8NG97 314 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 TBX15Q96SF7 602 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 GINS3Q9BRX5 216 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 SMIM3Q9BZL3 60 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 LYRM2Q9NU23 88 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms