RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 SMIM10L1P0DMW3 83 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 MEF2CQ06413 473 aaPredicted RBP5.71□□□□□ -1.49
CHD6-203ENST00000373233 ZNF816Q0VGE8 651 aaPredicted RBP5.71□□□□□ -1.49
CHD6-203ENST00000373233 OR1L4Q8NGR5 311 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 LSM10Q969L4 123 aaKnown RBP5.71□□□□□ -1.49
CHD6-203ENST00000373233 SMIM10Q96HG1 83 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 LOXL4Q96JB6 756 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 SLC7A10Q9NS82 523 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 COA3Q9Y2R0 106 aaPredicted RBP5.71□□□□□ -1.49
CHD6-203ENST00000373233 SELEP16581 610 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 MAS1LP35410 378 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 SRSF3P84103 164 aaKnown RBP5.71□□□□□ -1.49
CHD6-203ENST00000373233 TBC1D26Q86UD7 250 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 APCDD1LQ8NCL9 501 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 OR2V2Q96R30 315 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 MMP25Q9NPA2 562 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 DTX4Q9Y2E6 619 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 A0A1W2PP11 408 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 CLDN17P56750 224 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 ADAMTSL5Q6ZMM2 481 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 SLC25A26Q70HW3 274 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 SMIM20Q8N5G0 67 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 OR10D3Q8NH80 312 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 ZNF721Q8TF20 911 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 TIMD4Q96H15 378 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 GNB4Q9HAV0 340 aa5.71□□□□□ -1.49
CHD6-203ENST00000373233 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.71□□□□□ -1.49
CHD6-203ENST00000373233 A0A087WUJ7 227 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 TMEM8BA6NDV4 472 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 PDPNQ86YL7 162 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 ARIH2OSQ8N7S6 290 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 OR4X1Q8NH49 305 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 CT55Q8WUE5 264 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 TMEM170AQ8WVE7 144 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 SSMEM1Q8WWF3 244 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 ST20Q9HBF5 79 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 MBNL3Q9NUK0 354 aaKnown RBP5.71□□□□□ -1.5
CHD6-203ENST00000373233 SIGLEC7Q9Y286 467 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 ALG1L2C9J202 215 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 CD1AP06126 327 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 LINC00869P0C866 280 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 RPS27P42677 84 aaKnown RBP5.71□□□□□ -1.5
CHD6-203ENST00000373233 CLDN18P56856 261 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 TWIST1Q15672 202 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 ANKRD55Q3KP44 614 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 SIGLEC11Q96RL6 698 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 COMMD5Q9GZQ3 224 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 TRAV8-7A0A075B6U6 113 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 K7ESF4 209 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 CDC14BO60729 498 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 LSM11P83369 360 aaKnown RBP eCLIP5.71□□□□□ -1.5
CHD6-203ENST00000373233 Q8NFD4 153 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 NDUFB4O95168 129 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 C9orf40Q8IXQ3 194 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 TMEM74BQ9NUR3 256 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 LOC389332A0A1B0GUA5 103 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 VAX1Q5SQQ9 334 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 TMEM91Q6ZNR0 172 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 LHFPL2Q6ZUX7 228 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.71□□□□□ -1.5
CHD6-203ENST00000373233 MGST2Q99735 147 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 PCNX3Q9H6A9 2034 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 MPZL1O95297 269 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 TGFAP01135 160 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 SP9P0CG40 484 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 AZU1P20160 251 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 ZAR1Q86SH2 424 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 LRRC29Q8WV35 223 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 FER1L6-AS2Q96M78 137 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 MAP1LC3AQ9H492 121 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 SELENOKQ9Y6D0 94 aa5.71□□□□□ -1.5
CHD6-203ENST00000373233 SPINK9Q5DT21 86 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 OR1K1Q8NGR3 316 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 TXNDC17Q9BRA2 123 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 EFSO43281 561 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 TSPOP30536 169 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 OR1F12Q8NHA8 337 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 ZNF501Q96CX3 271 aaPredicted RBP5.7□□□□□ -1.5
CHD6-203ENST00000373233 TMEM167BQ9NRX6 74 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 NEUROG3Q9Y4Z2 214 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 TMEM250H0YL14 139 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 HKR1P10072 659 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 HDHD3Q9BSH5 251 aaPredicted RBP5.7□□□□□ -1.5
CHD6-203ENST00000373233 RBFOX2O43251 390 aaKnown RBP eCLIP5.7□□□□□ -1.56e-7■■□□□ 14.1
CHD6-203ENST00000373233 EIF3IQ13347 325 aaKnown RBP5.7□□□□□ -1.5
CHD6-203ENST00000373233 OR4P4Q8NGL7 312 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 OR52N5Q8NH56 324 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 PTX4Q96A99 478 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 NAA38Q9BRA0 125 aaKnown RBP5.7□□□□□ -1.5
CHD6-203ENST00000373233 DUSP13Q9UII6 198 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 HDGFL3Q9Y3E1 203 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 IGKV1D-16P01601 117 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 SERF2P84101 59 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 WDR38Q5JTN6 314 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 ZNF324BQ6AW86 544 aaPredicted RBP5.7□□□□□ -1.5
CHD6-203ENST00000373233 OR4C3Q8NH37 302 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 ZNF205O95201 554 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 IFI6P09912 130 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 C4orf45Q96LM5 186 aa5.7□□□□□ -1.5
CHD6-203ENST00000373233 NEU1Q99519 415 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms