RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ZFPL1O95159 310 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 RAB9AP51151 201 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 SAMD5Q5TGI4 173 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 MRPL24Q96A35 216 aaKnown RBP12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 TUBD1Q9UJT1 453 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 SCN10AQ9Y5Y9 1956 aa12.18□□□□□ -0.46
RAPGEF1-202ENST00000372190 C17orf51A8MQB3 221 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 WNT5AP41221 380 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 POU2AF1Q16633 256 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 SPANXDQ9BXN6 97 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 QTRT1Q9BXR0 403 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 FOXS1O43638 330 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 KISS1Q15726 138 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 TMEM170BQ5T4T1 132 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 ZNF660Q6AZW8 331 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 PGLYRP3Q96LB9 341 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 TRAV12-3A0A0B4J271 114 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 A6NNC1 897 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 PRSS23O95084 383 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 CCL2P13500 99 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 TNFRSF19Q9NS68 423 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 DOCK3Q8IZD9 2030 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 PDCD6O75340 191 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 EIF4EBP2Q13542 120 aaPredicted RBP12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 KIAA1644Q3SXP7 199 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 DMRTC1Q5HYR2 192 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 C4orf45Q96LM5 186 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 SF3B5Q9BWJ5 86 aaKnown RBP12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 hADV38S2A0JD32 116 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 PLPP3O14495 311 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 ATP5LO75964 103 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 C1QAP02745 245 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 GNG3P63215 75 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 CBLN3Q6UW01 205 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 C17orf47Q8NEP4 570 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 ZNF479Q96JC4 524 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 SLC25A15Q9Y619 301 aa12.17□□□□□ -0.46
RAPGEF1-202ENST00000372190 HTN1P15515 57 aa12.16□□□□□ -0.46
RAPGEF1-202ENST00000372190 OR10J3Q5JRS4 329 aa12.16□□□□□ -0.46
RAPGEF1-202ENST00000372190 H0Y980 276 aa12.16□□□□□ -0.46
RAPGEF1-202ENST00000372190 VSTM2LQ96N03 204 aa12.16□□□□□ -0.46
RAPGEF1-202ENST00000372190 SEPSECSQ9HD40 501 aaKnown RBP12.16□□□□□ -0.46
RAPGEF1-202ENST00000372190 HRKO00198 91 aa12.16□□□□□ -0.46
RAPGEF1-202ENST00000372190 LGALS1P09382 135 aaKnown RBP12.16□□□□□ -0.46
RAPGEF1-202ENST00000372190 C9orf40Q8IXQ3 194 aa12.16□□□□□ -0.46
RAPGEF1-202ENST00000372190 TSPAN32Q96QS1 320 aa12.16□□□□□ -0.46
RAPGEF1-202ENST00000372190 PRR13Q9NZ81 148 aa12.16□□□□□ -0.46
RAPGEF1-202ENST00000372190 C7orf66A4D0T2 115 aa12.16□□□□□ -0.46
RAPGEF1-202ENST00000372190 PRTN3P24158 256 aa12.16□□□□□ -0.46
RAPGEF1-202ENST00000372190 A0A1W2PR77 199 aa12.15□□□□□ -0.46
RAPGEF1-202ENST00000372190 SLC25A20O43772 301 aa12.15□□□□□ -0.46
RAPGEF1-202ENST00000372190 ASAH2BP0C7U1 165 aa12.15□□□□□ -0.46
RAPGEF1-202ENST00000372190 FOXL2P58012 376 aa12.15□□□□□ -0.46
RAPGEF1-202ENST00000372190 AMMECR1Q9Y4X0 333 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF1-202ENST00000372190 KLF9Q13886 244 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF1-202ENST00000372190 RTP5Q14D33 572 aa12.15□□□□□ -0.46
RAPGEF1-202ENST00000372190 ZNF721Q8TF20 911 aa12.15□□□□□ -0.46
RAPGEF1-202ENST00000372190 LCN2P80188 198 aa12.15□□□□□ -0.46
RAPGEF1-202ENST00000372190 GVQW1Q8N7I0 195 aa12.15□□□□□ -0.46
RAPGEF1-202ENST00000372190 OR6X1Q8NH79 312 aa12.15□□□□□ -0.46
RAPGEF1-202ENST00000372190 KIR2DL4Q99706 377 aa12.15□□□□□ -0.46
RAPGEF1-202ENST00000372190 ID1P41134 155 aa12.15□□□□□ -0.46
RAPGEF1-202ENST00000372190 HIGD1AQ9Y241 93 aa12.15□□□□□ -0.46
RAPGEF1-202ENST00000372190 SUMO2P61956 95 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 MMD2Q8IY49 270 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 SLC25A2Q9BXI2 301 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 DEFB108AA8MXU0 73 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 GFRA1P56159 465 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 HSPE1P61604 102 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 TNXAQ16473 311 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 ATP1A1-AS1Q5TC04 95 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 FAM222BQ8WU58 562 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 CXXC4Q9H2H0 198 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 KLK15Q9H2R5 256 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 CA10Q9NS85 328 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 CELA2AP08217 269 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 TMEM258P61165 79 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 C10orf111Q8N326 155 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 G6PC2Q9NQR9 355 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 PRNDQ9UKY0 176 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 PQLC2Q6ZP29 291 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 KIF13BQ9NQT8 1826 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 NKX2-6A6NCS4 301 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 EPPINO95925 133 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 PSG6Q00889 435 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 SLC25A30Q5SVS4 291 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 C8orf82Q6P1X6 216 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 DNM1P46Q6ZS02 220 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 KIR3DL3Q8N743 410 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 WDYHV1Q96HA8 205 aa12.14□□□□□ -0.47
RAPGEF1-202ENST00000372190 PLA2G10O15496 165 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 TMEM177Q53S58 311 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 BOD1L2Q8IYS8 172 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 BRCA1P38398 1863 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 DMKNQ6E0U4 476 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 WNT2BQ93097 391 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 SCNM1Q9BWG6 230 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 TRAV30A0A087WSZ9 112 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 TRAV38-1A0A0B4J264 116 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 GGTLC3B5MD39 225 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms