RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 LAMTOR1Q6IAA8 161 aa12.81□□□□□ -0.36
PFDN4-201ENST00000371419 DHRS11Q6UWP2 260 aa12.81□□□□□ -0.36
PFDN4-201ENST00000371419 ODF3L1Q8IXM7 274 aa12.81□□□□□ -0.36
PFDN4-201ENST00000371419 ADAD2Q8NCV1 583 aaKnown RBP12.81□□□□□ -0.36
PFDN4-201ENST00000371419 RTN4IP1Q8WWV3 396 aaPredicted RBP12.81□□□□□ -0.36
PFDN4-201ENST00000371419 AGMATQ9BSE5 352 aa12.81□□□□□ -0.36
PFDN4-201ENST00000371419 C5orf66Q9H5L9 145 aa12.81□□□□□ -0.36
PFDN4-201ENST00000371419 PLSCR3Q9NRY6 295 aa12.81□□□□□ -0.36
PFDN4-201ENST00000371419 COL6A5A8TX70 2615 aa12.81□□□□□ -0.36
PFDN4-201ENST00000371419 OR5H14A6NHG9 310 aa12.8□□□□□ -0.36
PFDN4-201ENST00000371419 GPR137BO60478 399 aa12.8□□□□□ -0.36
PFDN4-201ENST00000371419 PGAM2P15259 253 aa12.8□□□□□ -0.36
PFDN4-201ENST00000371419 TGIF2LXQ8IUE1 241 aa12.8□□□□□ -0.36
PFDN4-201ENST00000371419 H1FOOQ8IZA3 346 aaPredicted RBP12.8□□□□□ -0.36
PFDN4-201ENST00000371419 OR5M8Q8NGP6 311 aa12.8□□□□□ -0.36
PFDN4-201ENST00000371419 ZNF2Q9BSG1 426 aaPredicted RBP12.8□□□□□ -0.36
PFDN4-201ENST00000371419 PITPNC1Q9UKF7 332 aa12.8□□□□□ -0.36
PFDN4-201ENST00000371419 TCF19Q9Y242 345 aa12.8□□□□□ -0.36
PFDN4-201ENST00000371419 SAA2-SAA4A0A096LPE2 208 aa12.79□□□□□ -0.36
PFDN4-201ENST00000371419 IGHV1-3A0A0C4DH29 117 aa12.79□□□□□ -0.36
PFDN4-201ENST00000371419 FAM181BA6NEQ2 426 aa12.79□□□□□ -0.36
PFDN4-201ENST00000371419 TIMM23O14925 209 aa12.79□□□□□ -0.36
PFDN4-201ENST00000371419 RAB29O14966 203 aa12.79□□□□□ -0.36
PFDN4-201ENST00000371419 SFT2D2O95562 160 aa12.79□□□□□ -0.36
PFDN4-201ENST00000371419 CTSDP07339 412 aaPredicted RBP12.79□□□□□ -0.36
PFDN4-201ENST00000371419 SAA2P0DJI9 122 aaPredicted RBP12.79□□□□□ -0.36
PFDN4-201ENST00000371419 H2BFSP57053 126 aa12.79□□□□□ -0.36
PFDN4-201ENST00000371419 FGL1Q08830 312 aa12.79□□□□□ -0.36
PFDN4-201ENST00000371419 NDUFA5Q16718 116 aa12.79□□□□□ -0.36
PFDN4-201ENST00000371419 ZNF660Q6AZW8 331 aaPredicted RBP12.79□□□□□ -0.36
PFDN4-201ENST00000371419 LIAT1Q6ZQX7 453 aa12.79□□□□□ -0.36
PFDN4-201ENST00000371419 MOB3BQ86TA1 216 aa12.79□□□□□ -0.36
PFDN4-201ENST00000371419 DRAM1Q8N682 238 aa12.79□□□□□ -0.36
PFDN4-201ENST00000371419 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.79□□□□□ -0.36
PFDN4-201ENST00000371419 OR11H4Q8NGC9 324 aa12.79□□□□□ -0.36
PFDN4-201ENST00000371419 ABHD14BQ96IU4 210 aa12.79□□□□□ -0.36
PFDN4-201ENST00000371419 RTBDNQ9BSG5 229 aaPredicted RBP12.79□□□□□ -0.36
PFDN4-201ENST00000371419 A6NDX4 124 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 RNF212BA8MTL3 300 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 G3V3Q6 166 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 CRYBA1P05813 215 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 OR8U9P0C7N5 309 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 CD24P25063 80 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 RPL15P61313 204 aaKnown RBP12.78□□□□□ -0.36
PFDN4-201ENST00000371419 C2orf68Q2NKX9 166 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 FAM71F2Q6NXP2 309 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 ZNF833PQ6ZTB9 187 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 OR8U1Q8NH10 309 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 COQ8AQ8NI60 647 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 GRPEL2Q8TAA5 225 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 CFHR4Q92496 578 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 S1PR3Q99500 378 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 RAB18Q9NP72 206 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 RNF150Q9ULK6 438 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 FAM90A9PA6NNJ1 464 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 HMSDA8MTL9 139 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 SIX6O95475 246 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 FAM106CPP0CH98 169 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 NFYAP23511 347 aaPredicted RBP12.78□□□□□ -0.36
PFDN4-201ENST00000371419 GPR12P47775 334 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 UCP3P55916 312 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 HABP2Q14520 560 aaPredicted RBP12.78□□□□□ -0.36
PFDN4-201ENST00000371419 Q5BKY6 102 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 THNSL2Q86YJ6 484 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 CASTOR1Q8WTX7 329 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 TMEM230Q96A57 120 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 C19orf24Q9BVV8 132 aa12.78□□□□□ -0.36
PFDN4-201ENST00000371419 RBM7Q9Y580 266 aaKnown RBP12.78□□□□□ -0.36
PFDN4-201ENST00000371419 LGALSLQ3ZCW2 172 aaPredicted RBP12.77□□□□□ -0.37
PFDN4-201ENST00000371419 RPL39P5Q59GN2 51 aa12.77□□□□□ -0.37
PFDN4-201ENST00000371419 DHRS7BQ6IAN0 325 aaPredicted RBP12.77□□□□□ -0.37
PFDN4-201ENST00000371419 TMEM219Q86XT9 240 aa12.77□□□□□ -0.37
PFDN4-201ENST00000371419 SGPP2Q8IWX5 399 aa12.77□□□□□ -0.37
PFDN4-201ENST00000371419 ZNF251Q9BRH9 671 aa12.77□□□□□ -0.37
PFDN4-201ENST00000371419 PDCD10Q9BUL8 212 aa12.77□□□□□ -0.37
PFDN4-201ENST00000371419 COMMD9Q9P000 198 aa12.77□□□□□ -0.37
PFDN4-201ENST00000371419 OR2W1Q9Y3N9 320 aa12.77□□□□□ -0.37
PFDN4-201ENST00000371419 IGHV3-72A0A0B4J1Y9 119 aa12.76□□□□□ -0.37
PFDN4-201ENST00000371419 DBX1A6NMT0 343 aa12.76□□□□□ -0.37
PFDN4-201ENST00000371419 CHST1O43916 411 aa12.76□□□□□ -0.37
PFDN4-201ENST00000371419 TUSC2O75896 110 aa12.76□□□□□ -0.37
PFDN4-201ENST00000371419 SNRNP70P08621 437 aaKnown RBP12.76□□□□□ -0.37
PFDN4-201ENST00000371419 CD1BP29016 333 aa12.76□□□□□ -0.37
PFDN4-201ENST00000371419 FCGR2CP31995 323 aa12.76□□□□□ -0.37
PFDN4-201ENST00000371419 HERV-K104P61576 105 aa12.76□□□□□ -0.37
PFDN4-201ENST00000371419 CYCSP99999 105 aaKnown RBP12.76□□□□□ -0.37
PFDN4-201ENST00000371419 ZNF767PQ75MW2 155 aa12.76□□□□□ -0.37
PFDN4-201ENST00000371419 KCTD9Q7L273 389 aa12.76□□□□□ -0.37
PFDN4-201ENST00000371419 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.76□□□□□ -0.37
PFDN4-201ENST00000371419 MOB3AQ96BX8 217 aa12.76□□□□□ -0.37
PFDN4-201ENST00000371419 MRPL20Q9BYC9 149 aaKnown RBP12.76□□□□□ -0.37
PFDN4-201ENST00000371419 OR2D2Q9H210 308 aa12.76□□□□□ -0.37
PFDN4-201ENST00000371419 GAB2Q9UQC2 676 aa12.76□□□□□ -0.37
PFDN4-201ENST00000371419 KCNIP3Q9Y2W7 256 aa12.76□□□□□ -0.37
PFDN4-201ENST00000371419 IGKV1D-33P01593 117 aa12.75□□□□□ -0.37
PFDN4-201ENST00000371419 IGKV1-33P01594 117 aa12.75□□□□□ -0.37
PFDN4-201ENST00000371419 HKR1P10072 659 aa12.75□□□□□ -0.37
PFDN4-201ENST00000371419 LUMP51884 338 aaPredicted RBP12.75□□□□□ -0.37
PFDN4-201ENST00000371419 HES1Q14469 280 aa12.75□□□□□ -0.37
PFDN4-201ENST00000371419 ABCA11PQ4W5N1 156 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms