RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 hCG_38984A0A1B0GV85 526 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 A0A1W2PPB8 328 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 A0A1W2PRS3 328 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 KIR3DP1A8MWS1 328 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 C2CD4DB7Z1M9 353 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 RAB29O14966 203 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 SRP14P37108 136 aaKnown RBP8.82□□□□□ -1
PRPF38B-201ENST00000370021 GNB1P62873 340 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 RPL31P62899 125 aaKnown RBP8.82□□□□□ -1
PRPF38B-201ENST00000370021 RAC1P63000 192 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 VHLLQ6RSH7 139 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 Q6ZWC4 215 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 SLC25A45Q8N413 288 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 MBD3L1Q8WWY6 194 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 OIT3Q8WWZ8 545 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 GALMQ96C23 342 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 SLC35E1Q96K37 410 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 LRFN3Q9BTN0 628 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 RNF115Q9Y4L5 304 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 FREM2Q5SZK8 3169 aa8.82□□□□□ -1
PRPF38B-201ENST00000370021 PTPRZ1P23471 2315 aaPredicted RBP8.81□□□□□ -1
PRPF38B-201ENST00000370021 TMEM250H0YL14 139 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 BRS3P32247 399 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 ERVK-16P61578 105 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 OR8B8Q15620 311 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 TIGITQ495A1 244 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 SPINK14Q6IE38 97 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 LINC01551Q86U37 167 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 ZNF573Q86YE8 665 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 TGIF2LYQ8IUE0 185 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 ODF3L1Q8IXM7 274 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 SLC24A4Q8NFF2 622 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 NPCDR1Q9BY65 106 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 HIPK2Q9H2X6 1198 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 WASHC3Q9Y3C0 194 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 ODAMA1E959 279 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 NPIPB13A6NJU9 1138 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 NPIPB4C9JG80 1138 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 CCL4P13236 92 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 NTF4P34130 210 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 ARG2P78540 354 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 ACTL10Q5JWF8 245 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 KMT5CQ86Y97 462 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 ZIC4Q8N9L1 334 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 AP1S3Q96PC3 154 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 PARD6GQ9BYG4 376 aaPredicted RBP8.81□□□□□ -1
PRPF38B-201ENST00000370021 BET1LQ9NYM9 111 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 SPTA1P02549 2419 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 RNF212BA8MTL3 300 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 IGHV3-48P01763 117 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 LIFP15018 202 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 CD1BP29016 333 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 FABP6P51161 128 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 SOX8P57073 446 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 RAC3P60763 192 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 RELBQ01201 579 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 PSG5Q15238 335 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 DCAF10Q5QP82 559 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 LEMD1Q68G75 181 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 TRAT1Q6PIZ9 186 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 RNASEH2CQ8TDP1 164 aaKnown RBP8.81□□□□□ -1
PRPF38B-201ENST00000370021 FAM216AQ8WUB2 273 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 C10orf35Q96D05 121 aa8.81□□□□□ -1
PRPF38B-201ENST00000370021 QTRT1Q9BXR0 403 aaKnown RBP8.81□□□□□ -1
PRPF38B-201ENST00000370021 RNASE7Q9H1E1 156 aaKnown RBP8.81□□□□□ -1
PRPF38B-201ENST00000370021 C17orf98A8MV24 154 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 RBFOX2O43251 390 aaKnown RBP eCLIP8.8□□□□□ -1
PRPF38B-201ENST00000370021 CSN3P07498 182 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 GNG4P50150 75 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 GNG3P63215 75 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 RPEL1Q2QD12 228 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 MAJINQ3KP22 176 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 PQLC2Q6ZP29 291 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 NFAM1Q8NET5 270 aaPredicted RBP8.8□□□□□ -1
PRPF38B-201ENST00000370021 PSMG3Q9BT73 122 aaPredicted RBP8.8□□□□□ -1
PRPF38B-201ENST00000370021 TPPP3Q9BW30 176 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 CFHR5Q9BXR6 569 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 TNCP24821 2201 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 EML6Q6ZMW3 1958 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 RAB31Q13636 194 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 RABEPKQ7Z6M1 372 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 MMD2Q8IY49 270 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 DCTN5Q9BTE1 182 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 MCRIP2Q9BUT9 160 aaKnown RBP8.8□□□□□ -1
PRPF38B-201ENST00000370021 CHCHD2Q9Y6H1 151 aaPredicted RBP8.8□□□□□ -1
PRPF38B-201ENST00000370021 TRANK1O15050 2925 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 M0R1X1 148 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 IGKV1-39P01597 117 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 IGKV1D-39P04432 117 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 BTF3P20290 206 aaKnown RBP8.8□□□□□ -1
PRPF38B-201ENST00000370021 GATA2P23769 480 aaPredicted RBP8.8□□□□□ -1
PRPF38B-201ENST00000370021 CRYBB3P26998 211 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 GPR6P46095 362 aaPredicted RBP8.8□□□□□ -1
PRPF38B-201ENST00000370021 KRTCAP3Q53RY4 240 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 STPG4Q8N801 248 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 C22orf15Q8WYQ4 148 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 HSD17B10Q99714 261 aaKnown RBP8.8□□□□□ -1
PRPF38B-201ENST00000370021 NRN1Q9NPD7 142 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 LAMTOR2Q9Y2Q5 125 aa8.8□□□□□ -1
PRPF38B-201ENST00000370021 NUP210LQ5VU65 1888 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms