RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 EFNB2P52799 333 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 SLC25A1P53007 311 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 FOXG1P55316 489 aaPredicted RBP4.26□□□□□ -1.73
UBE3D-202ENST00000369746 ADAM8P78325 824 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 TDRG1Q3Y452 100 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 MIDNQ504T8 468 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 SPANXN4Q5MJ08 99 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 STUMQ69YW2 141 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 UNQ5815/PRO19632Q6UWF5 114 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 ADAMTSL5Q6ZMM2 481 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 Q6ZSR6 202 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 ZNF429Q86V71 674 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 UMODL1-AS1Q8N2C9 162 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 MFSD8Q8NHS3 518 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 IL36AQ9UHA7 158 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 CSAG2Q9Y5P2 127 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 APC2O95996 2303 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 A0A0G2JMM0 328 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 A0A1W2PPB8 328 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 A0A1W2PRD5 423 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 OR51F1A6NGY5 319 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 KIR3DP1A8MWS1 328 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 KIR2DS3K7RE56 304 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 TAX1BP3O14907 124 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 TMPRSS11DO60235 418 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 RAMP1O60894 148 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 NUDT3O95989 172 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 GASTP01350 101 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 HLA-DRB1P01911 266 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 CATP04040 527 aaKnown RBP4.26□□□□□ -1.73
UBE3D-202ENST00000369746 USF1P22415 310 aaPredicted RBP4.26□□□□□ -1.73
UBE3D-202ENST00000369746 IGFBP6P24592 240 aaPredicted RBP4.26□□□□□ -1.73
UBE3D-202ENST00000369746 SRP14P37108 136 aaKnown RBP4.26□□□□□ -1.73
UBE3D-202ENST00000369746 TAS2R30P59541 319 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 KIR2DS3Q14952 304 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 PMCHL1Q16048 86 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 DUSP5Q16690 384 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 SLC25A52Q3SY17 297 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 DCST2Q5T1A1 773 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.26□□□□□ -1.73
UBE3D-202ENST00000369746 LEG1Q6P5S2 330 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 Q6ZN92 141 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 SLC22A18ASQ8N1D0 253 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 NFAM1Q8NET5 270 aaPredicted RBP4.26□□□□□ -1.73
UBE3D-202ENST00000369746 OR5AN1Q8NGI8 311 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 SLC25A40Q8TBP6 338 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 ZNF681Q96N22 645 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 AGMATQ9BSE5 352 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 CABLES2Q9BTV7 478 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 LRRC61Q9BV99 259 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 MS4A6AQ9H2W1 248 aa4.26□□□□□ -1.73
UBE3D-202ENST00000369746 FLNBO75369 2602 aaKnown RBP4.26□□□□□ -1.73
UBE3D-202ENST00000369746 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 BORCS7-ASMTA0A0B4J1R7 106 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 KIR2DS5A0A0G2JLQ3 304 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 A0A0G2JNG1 304 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 IGHV5-10-1A0A0J9YXX1 117 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 RBFOX3A6NFN3 312 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 ERI3O43414 337 aaKnown RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 EML2O95834 649 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 TBX6O95947 436 aaPredicted RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 HBE1P02100 147 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 IGF1P05019 195 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 RPL7P18124 248 aaKnown RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 HRH1P35367 487 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 YPEL3P61236 119 aaPredicted RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 GNG5P63218 68 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 KIR2DS5Q14953 304 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 OR8B8Q15620 311 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 ACSF3Q4G176 576 aaPredicted RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 PHLDA2Q53GA4 152 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 TMEM78Q5T7P6 136 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 Q71RC1 249 aaPredicted RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 FA2HQ7L5A8 372 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 SFTPA1Q8IWL2 248 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 TMEM130Q8N3G9 435 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 ZADH2Q8N4Q0 377 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 RBMXL3Q8N7X1 1067 aaKnown RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 C11orf45Q8TAV5 145 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 C18orf12Q96KH6 178 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 FOXB1Q99853 325 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 POLR2J3Q9H1A7 115 aaKnown RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 BPIFA1Q9NP55 256 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 NUDT4Q9NZJ9 180 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 CNOT1A5YKK6 2376 aaKnown RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 ARHGEF17Q96PE2 2063 aaPredicted RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 ABCA2Q9BZC7 2435 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 TRAV9-1A0A075B6T8 112 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 SAA2-SAA4A0A096LPE2 208 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 NSG1A0A0A6YYJ2 146 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 TRAV1-1A0A0B4J248 108 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 CDC14CA4D256 554 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 FAM231BA6NCW3 169 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 SPRY3O43610 288 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 NSG1P42857 185 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 CRYBA2P53672 197 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 LCN6P62502 163 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 RPL24P83731 157 aaKnown RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 LTBQ06643 244 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 TMEM267Q0VDI3 215 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms