RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 CORTO00230 105 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 HSPE1P61604 102 aaKnown RBP9.83□□□□□ -0.84
SYNE1-204ENST00000367248 UNC119Q13432 240 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 SLC35E4Q6ICL7 350 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 HSD17B13Q7Z5P4 300 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-204ENST00000367248 OR4X2Q8NGF9 303 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 C2CD4CQ8TF44 421 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 ZNF586Q9NXT0 402 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 C11orf94C9JXX5 98 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 TFF1P04155 84 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 TCL1AP56279 114 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 ACP7Q6ZNF0 438 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 NPVFQ9HCQ7 196 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 MANBALQ9NQG1 85 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 TMEM140Q9NV12 185 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 HSBP1O75506 76 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 CSN3P07498 182 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 C9orf62Q8N4C0 152 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 GBGT1Q8N5D6 347 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 NEUROG3Q9Y4Z2 214 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 COL4A6Q14031 1691 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 IGKV3OR2-268A0A0C4DH90 116 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 C12orf77C9JDV5 145 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 HYPMO75409 117 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 CD74P04233 296 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 POC1AQ8NBT0 407 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 PRSS33Q8NF86 280 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 GPR146Q96CH1 333 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 CBLN4Q9NTU7 201 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 C17orf100A8MU93 164 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 ZNF345Q14585 488 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 BSXQ3C1V8 233 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 SSC4DQ8WTU2 575 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 FAM216AQ8WUB2 273 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 CCDC88CQ9P219 2028 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 RHBDL1O75783 438 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 IGKV1D-33P01593 117 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 IGKV1-33P01594 117 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 ITLN2Q8WWU7 325 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-204ENST00000367248 H3BTX0 84 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 MMP9P14780 707 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 AMTP48728 403 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 SELENOTP62341 195 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 OR52M1Q8NGK5 317 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 OR4C13Q8NGP0 309 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 FCGR2BP31994 310 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-204ENST00000367248 FA2HQ7L5A8 372 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 TRAV40A0A0B4J280 105 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 FABP4P15090 132 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 C1QTNF12Q5T7M4 302 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 CADP27708 2225 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 MARCH11A6NNE9 402 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 Q1RN00 199 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 ZNF385CQ66K41 422 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-204ENST00000367248 WFIKKN1Q96NZ8 548 aa9.82□□□□□ -0.84
SYNE1-204ENST00000367248 FAM157CP0CG43 387 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 Q0VFX4 171 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 WBP1Q96G27 269 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 HIGD1AQ9Y241 93 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 MED12Q93074 2177 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 CEACAM18A8MTB9 384 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 DNM1P46Q6ZS02 220 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 SLC35E3Q7Z769 313 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 ZIC4Q8N9L1 334 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 NAT8BQ9UHF3 227 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 LINC00527Q9UJ94 153 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 IQCF6A8MYZ5 107 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 FAM90A26D6RGX4 464 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 OR2A4O95047 310 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 THBDP07204 575 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 UCP3P55916 312 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 ASPHD2Q6ICH7 369 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 OR2A7Q96R45 310 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 PAGE4O60829 102 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 ZP3P21754 424 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 USF1P22415 310 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-204ENST00000367248 RND2P52198 227 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 PRNTQ86SH4 94 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 LY6HO94772 140 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 RUNX1Q01196 453 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 DRAM1Q8N682 238 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 LURAP1Q96LR2 239 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 PI4KAP42356 2102 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 RGS13O14921 159 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 SIGLECL1Q8N7X8 197 aa9.81□□□□□ -0.84
SYNE1-204ENST00000367248 MRPL37Q9BZE1 423 aaKnown RBP9.81□□□□□ -0.84
SYNE1-204ENST00000367248 PDCD11Q14690 1871 aaKnown RBP9.8□□□□□ -0.84
SYNE1-204ENST00000367248 SCO1O75880 301 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 NHLH2Q02577 135 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 ARTNQ5T4W7 220 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 COLCA1Q6ZS62 124 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 TOLLIPQ9H0E2 274 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 PROB1E7EW31 1015 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 MPDU1O75352 247 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 PNRC1Q12796 327 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-204ENST00000367248 FBXL15Q9H469 300 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 NAT8Q9UHE5 227 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 MTCL1Q9Y4B5 1905 aaKnown RBP9.8□□□□□ -0.84
SYNE1-204ENST00000367248 HIST1H1EP10412 219 aaKnown RBP9.8□□□□□ -0.84
SYNE1-204ENST00000367248 TIMP3P35625 211 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms