RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 TMEM222Q9H0R3 208 aa5.48□□□□□ -1.53
RNU1-55P-201ENST00000365510 FAM212BQ9NTI7 297 aaPredicted RBP5.48□□□□□ -1.53
RNU1-55P-201ENST00000365510 MGAM2Q2M2H8 2515 aa5.48□□□□□ -1.53
RNU1-55P-201ENST00000365510 hCG_2014768A0A024R1R8 64 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 IGHV3OR16-10A0A075B7F0 116 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 IGHV1-3A0A0C4DH29 117 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 LINC00473A8K010 186 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 H0YJW9 148 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 LY6LH3BQJ8 138 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 RBFOX2O43251 390 aaKnown RBP eCLIP5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 TCF21O43680 179 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 FCGR3BO75015 233 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 ATG12O94817 140 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 CT45A6P0DMU7 189 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 CT45A5P0DMU8 189 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 CT45A7P0DMV0 189 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 IGHV4-38-2P0DP08 117 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 RPA2P15927 270 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 UCP1P25874 307 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 ERVK-16P61578 105 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 RPL30P62888 115 aaKnown RBP5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 TMEM187Q14656 261 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 SSX2Q16385 188 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 BRD3OSQ6XYD6 125 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 LIAT1Q6ZQX7 453 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 LHFPL4Q7Z7J7 247 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 MOB3BQ86TA1 216 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 PDPNQ86YL7 162 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 ZNF695Q8IW36 515 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 SPAG16Q8N0X2 631 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 LGI3Q8N145 548 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 ZNF383Q8NA42 475 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 OR5AN1Q8NGI8 311 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 RNASE11Q8TAA1 199 aaKnown RBP5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 MITD1Q8WV92 249 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 DDB2Q92466 427 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 IL22RA2Q969J5 263 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 ST6GALNAC6Q969X2 333 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 MALSU1Q96EH3 234 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 TP53RKQ96S44 253 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 NABP2Q9BQ15 211 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 MED28Q9H204 178 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 OR51J1Q9H342 316 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 SLC35D1Q9NTN3 355 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 COMMD9Q9P000 198 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 WASHC3Q9Y3C0 194 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 FAM96BQ9Y3D0 163 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 HILPDAQ9Y5L2 63 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 SOX21Q9Y651 276 aaPredicted RBP5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 PKD1L1Q8TDX9 2849 aa5.47□□□□□ -1.53
RNU1-55P-201ENST00000365510 A0A0B4J2A0 478 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 DUXBA0A1W2PPF3 345 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 A0A1W2PPI3 338 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 H7C2Y5 167 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 TIMM23O14925 209 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 RAMP3O60896 148 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 PROP1O75360 226 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 CRYZL1O95825 349 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 HPRT1P00492 218 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 IFNA21P01568 189 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 FBP1P09467 338 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 BRS3P32247 399 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 MC5RP33032 325 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 AKR1C2P52895 323 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 SCGB2A2Q13296 93 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 DIAPH2-AS1Q14236 149 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 ANKRD55Q3KP44 614 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 SP6Q3SY56 376 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 TMEM268Q5VZI3 342 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 RUSC1-AS1Q66K80 236 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 LIN54Q6MZP7 749 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 PIP4P2Q8N4L2 257 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 C12orf45Q8N5I9 185 aaPredicted RBP5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 LRTM2Q8N967 370 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 UXS1Q8NBZ7 420 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 OR4C13Q8NGP0 309 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 GLYATL2Q8WU03 294 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 C22orf15Q8WYQ4 148 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 RBPMSQ93062 196 aaKnown RBP5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 TMEM56Q96MV1 263 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 DUX5Q96PT3 197 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 MS4A7Q9GZW8 240 aaPredicted RBP5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 PLEKHA2Q9HB19 425 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 PRR13Q9NZ81 148 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 SHPKQ9UHJ6 478 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 NUP50Q9UKX7 468 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 TMEM56-RWDD3S4R434 201 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 MEGF8Q7Z7M0 2845 aa5.46□□□□□ -1.54
RNU1-55P-201ENST00000365510 IGHV3-72A0A0B4J1Y9 119 aa5.45□□□□□ -1.54
RNU1-55P-201ENST00000365510 A0A0U1RQK1 487 aa5.45□□□□□ -1.54
RNU1-55P-201ENST00000365510 MARCH11A6NNE9 402 aa5.45□□□□□ -1.54
RNU1-55P-201ENST00000365510 VGLL3A8MV65 326 aa5.45□□□□□ -1.54
RNU1-55P-201ENST00000365510 GOSR2O14653 212 aa5.45□□□□□ -1.54
RNU1-55P-201ENST00000365510 SHOXO15266 292 aa5.45□□□□□ -1.54
RNU1-55P-201ENST00000365510 S1PR2O95136 353 aa5.45□□□□□ -1.54
RNU1-55P-201ENST00000365510 CDS2O95674 445 aa5.45□□□□□ -1.54
RNU1-55P-201ENST00000365510 HRASP01112 189 aa5.45□□□□□ -1.54
RNU1-55P-201ENST00000365510 FSHBP01225 129 aa5.45□□□□□ -1.54
RNU1-55P-201ENST00000365510 IGKV1-16P04430 117 aa5.45□□□□□ -1.54
RNU1-55P-201ENST00000365510 TRAPPC2P0DI81 140 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms