RNA–Protein interactions for RNA: ENST00000362025.9

RAB3IP-202, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-202ENST00000362025 ZNF580Q9UK33 172 aa13.2□□□□□ -0.3
RAB3IP-202ENST00000362025 TRAV6A0A075B6T7 132 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 OR5H8P0DN80 308 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 HIST1H1DP16402 221 aaKnown RBP13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 BLVRBP30043 206 aaPredicted RBP13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 C6orf201Q7Z4U5 140 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 FAM89BQ8N5H3 189 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 KLK15Q9H2R5 256 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 SAA2-SAA4A0A096LPE2 208 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 A0A0B4J293 547 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 SEC14L6B5MCN3 397 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 RAMP3O60896 148 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 RGS11O94810 467 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 CD3DP04234 171 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 SAA2P0DJI9 122 aaPredicted RBP13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 HMGN3Q15651 99 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 TATDN3Q17R31 274 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 C9orf66Q5T8R8 295 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 ZNF833PQ6ZTB9 187 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 OR2AK2Q8NG84 335 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 OR4D10Q8NGI6 311 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 IL1F10Q8WWZ1 152 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 PRR25Q96S07 402 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 MARVELD1Q9BSK0 173 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 TM2D1Q9BX74 207 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 OR51J1Q9H342 316 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 PARP11Q9NR21 331 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 KCNK7Q9Y2U2 307 aa13.19□□□□□ -0.3
RAB3IP-202ENST00000362025 ATP6V0E1O15342 81 aa13.18□□□□□ -0.3
RAB3IP-202ENST00000362025 NBR2O15453 112 aa13.18□□□□□ -0.3
RAB3IP-202ENST00000362025 TCRBP04435 133 aa13.18□□□□□ -0.3
RAB3IP-202ENST00000362025 PPIFP30405 207 aaKnown RBP13.18□□□□□ -0.3
RAB3IP-202ENST00000362025 GNG2P59768 71 aa13.18□□□□□ -0.3
RAB3IP-202ENST00000362025 SSBP1Q04837 148 aaKnown RBP13.18□□□□□ -0.3
RAB3IP-202ENST00000362025 FHL3Q13643 280 aa13.18□□□□□ -0.3
RAB3IP-202ENST00000362025 GVQW1Q8N7I0 195 aa13.18□□□□□ -0.3
RAB3IP-202ENST00000362025 OR11H1Q8NG94 326 aa13.18□□□□□ -0.3
RAB3IP-202ENST00000362025 OR4C16Q8NGL9 310 aa13.18□□□□□ -0.3
RAB3IP-202ENST00000362025 MYOZ3Q8TDC0 251 aa13.18□□□□□ -0.3
RAB3IP-202ENST00000362025 IFI27L2Q9H2X8 130 aa13.18□□□□□ -0.3
RAB3IP-202ENST00000362025 COL7A1Q02388 2944 aa13.18□□□□□ -0.3
RAB3IP-202ENST00000362025 IGHV7-81A0A0B4J1V7 117 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 INMT-MINDY4F8WBC2 141 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 HLA-DRB1P01911 266 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 GSTP1P09211 210 aaKnown RBP13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 HLA-DMAP28067 261 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 FAUP35544 74 aaKnown RBP13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 ECI1P42126 302 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 LY6G6FQ5SQ64 297 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 TMEM65Q6PI78 240 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 OR5B12Q96R08 314 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 NEURL2Q9BR09 285 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 GNB4Q9HAV0 340 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 CHMP1AQ9HD42 196 aaPredicted RBP13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■■□ 24.6
RAB3IP-202ENST00000362025 COPZ2Q9P299 210 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 DNAH9Q9NYC9 4486 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 NAP1L6A6NFF2 107 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 MFNGO00587 321 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 ST8SIA5O15466 376 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 AKAIN1P0CW23 69 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 RCVRNP35243 200 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 TAS2R19P59542 299 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 CD300CQ08708 224 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 ARFRP1Q13795 201 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 KIAA0141Q14154 515 aaPredicted RBP13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 C5orf64Q2M2E5 130 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 STEAP1BQ6NZ63 245 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 IFT46Q9NQC8 304 aa13.17□□□□□ -0.3
RAB3IP-202ENST00000362025 TRAV41A0A0B4J266 112 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 FOXI3A8MTJ6 420 aaPredicted RBP13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 HNRNPCP07910 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 LIN54Q6MZP7 749 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 ZNF491Q8N8L2 437 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 UBE2E2Q96LR5 201 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 PECRQ9BY49 303 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 PLEKHJ1Q9NW61 149 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 NUBP2Q9Y5Y2 271 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 M0QYG6 137 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 SSX5O60225 188 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 NAPSAO96009 420 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 IGLV1-40P01703 118 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 RPL39P5Q59GN2 51 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 NPBQ8NG41 125 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 OR1N2Q8NGR9 330 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 PARP12Q9H0J9 701 aaKnown RBP13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 C20orf85Q9H1P6 137 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 VSIG4Q9Y279 399 aa13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 LSM4Q9Y4Z0 139 aaKnown RBP13.16□□□□□ -0.3
RAB3IP-202ENST00000362025 ASPHD1Q5U4P2 390 aa13.15□□□□□ -0.3
RAB3IP-202ENST00000362025 DEDD2Q8WXF8 326 aa13.15□□□□□ -0.3
RAB3IP-202ENST00000362025 WWC2-AS2Q96NR7 200 aa13.15□□□□□ -0.3
RAB3IP-202ENST00000362025 KIAA1456Q9P272 454 aa13.15□□□□□ -0.3
RAB3IP-202ENST00000362025 ALG5Q9Y673 324 aa13.15□□□□□ -0.3
RAB3IP-202ENST00000362025 I3L521 148 aa13.14□□□□□ -0.31
RAB3IP-202ENST00000362025 RAB3DO95716 219 aa13.14□□□□□ -0.31
RAB3IP-202ENST00000362025 GNB1P62873 340 aa13.14□□□□□ -0.31
RAB3IP-202ENST00000362025 NDPQ00604 133 aa13.14□□□□□ -0.31
RAB3IP-202ENST00000362025 ZNF880Q6PDB4 577 aa13.14□□□□□ -0.31
RAB3IP-202ENST00000362025 GLDNQ6ZMI3 551 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms