RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 UBE2KP61086 200 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 HAGHQ16775 308 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 KHDC3LQ587J8 217 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 SLC35E4Q6ICL7 350 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 C5orf24Q7Z6I8 188 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 H1FOOQ8IZA3 346 aaPredicted RBP10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 NANPQ8TBE9 248 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 SCGB1C1Q8TD33 95 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 CABLES2Q9BTV7 478 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 CBLN4Q9NTU7 201 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 METRNQ9UJH8 293 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 OOEPA6NGQ2 149 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 IGHV2-5P01817 119 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 S100PP25815 95 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 TAGLN2P37802 199 aaKnown RBP10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 PPOXP50336 477 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 PAX9P55771 341 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 HEPN1Q6WQI6 88 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 ZNF429Q86V71 674 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 CCL17Q92583 94 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 LSM10Q969L4 123 aaKnown RBP10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 GPR146Q96CH1 333 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 TVP23CQ96ET8 276 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 SNX22Q96L94 193 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 NIPSNAP3BQ9BS92 247 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 SIRT7Q9NRC8 400 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 GSN-AS1Q9NRJ2 163 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 KCNIP1Q9NZI2 227 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 RNF150Q9ULK6 438 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 WSB1Q9Y6I7 421 aa10.93□□□□□ -0.66
SQSTM1-201ENST00000360718 CRYBG3Q68DQ2 2970 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 DOCK11Q5JSL3 2073 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 TRAV1-1A0A0B4J248 108 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 TRAV38-1A0A0B4J264 116 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 CXorf65A6NEN9 183 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 TXNL1O43396 289 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 OR3A1P47881 315 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 OR2B8PP59922 312 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 SP5Q6BEB4 398 aaPredicted RBP10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 C20orf204Q6ZNR8 217 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 ODF3L1Q8IXM7 274 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 DEFB108BQ8NET1 73 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 OR10V1Q8NGI7 309 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 RAB39BQ96DA2 213 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 GPHA2Q96T91 129 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 RAB1BQ9H0U4 201 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 OR51M1Q9H341 326 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 TMEM106BQ9NUM4 274 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 RFNGQ9Y644 331 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 AKAP6Q13023 2319 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 IGHV1-69-2A0A0G2JMI3 117 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 A0A1W2PPE3 182 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 NPIPB11E5RHQ5 1161 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 FOSL1P15407 271 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 EPHA1P21709 976 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 AESQ08117 197 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 ICAM4Q14773 271 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 OR10G4Q8NGN3 311 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 ZNF665Q9H7R5 613 aa10.92□□□□□ -0.66
SQSTM1-201ENST00000360718 ARID1AO14497 2285 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 PPIAL4EA0A075B759 164 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 LINC00587B1AMM8 73 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 B4DEV8 164 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 PPIAL4DF5H284 164 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 TMEM178BH3BS89 294 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 MGST3O14880 152 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 NXPH3O95157 252 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 SOD3P08294 240 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 PPIAL4FP0DN26 164 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 NQO2P16083 231 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 CEBPGP53567 150 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 RUNX1Q01196 453 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 TEX36Q5VZQ5 186 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 STUMQ69YW2 141 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 SLC35E3Q7Z769 313 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 THNSL2Q86YJ6 484 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 OR51H1Q8NH63 302 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 CLDND2Q8NHS1 167 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 PPIAL4AQ9Y536 164 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 NKX6-3A6NJ46 265 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 A6NNC1 897 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 ZNF737O75373 536 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 GOSR1O95249 250 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 RPS10P46783 165 aaKnown RBP10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 RBMS3Q6XE24 437 aaKnown RBP10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 SDSLQ96GA7 329 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 YPEL4Q96NS1 127 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 TMPRSS5Q9H3S3 457 aa10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 MBNL3Q9NUK0 354 aaKnown RBP10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 RBM7Q9Y580 266 aaKnown RBP10.91□□□□□ -0.66
SQSTM1-201ENST00000360718 YLPM1P49750 1951 aaKnown RBP10.9□□□□□ -0.66
SQSTM1-201ENST00000360718 SYNGR2O43760 224 aa10.9□□□□□ -0.66
SQSTM1-201ENST00000360718 GYPAP02724 150 aa10.9□□□□□ -0.66
SQSTM1-201ENST00000360718 HBG1P69891 147 aa10.9□□□□□ -0.66
SQSTM1-201ENST00000360718 HBG2P69892 147 aa10.9□□□□□ -0.66
SQSTM1-201ENST00000360718 DLK1P80370 383 aa10.9□□□□□ -0.66
SQSTM1-201ENST00000360718 PAX5Q02548 391 aa10.9□□□□□ -0.66
SQSTM1-201ENST00000360718 EDDM3AQ14507 147 aa10.9□□□□□ -0.66
SQSTM1-201ENST00000360718 TRAT1Q6PIZ9 186 aa10.9□□□□□ -0.66
SQSTM1-201ENST00000360718 SLC16A13Q7RTY0 426 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms