RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 STRCQ7RTU9 1775 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 HOXA5P20719 270 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 DRD3P35462 400 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 CYB5R2Q6BCY4 276 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 OR4D11Q8NGI4 311 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 OR2K2Q8NGT1 345 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 PARLQ9H300 379 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 TMEM129A0AVI4 362 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 LILRA5A6NI73 299 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 MOSPD3O75425 235 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 BIVMQ86UB2 503 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 RNF133Q8WVZ7 376 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 LOXL4Q96JB6 756 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 SFXN3Q9BWM7 321 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 PXMP4Q9Y6I8 212 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 A0A087X0M5 115 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 A0A1B0GX30 115 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 A0A1W2PQM1 296 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 IBA57Q5T440 356 aaKnown RBP8.43□□□□□ -1.06
CHD3-202ENST00000358181 RCC2Q9P258 522 aaKnown RBP8.43□□□□□ -1.06
CHD3-202ENST00000358181 ANAPC10Q9UM13 185 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 TNFSF18Q9UNG2 199 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 DCAF10Q5QP82 559 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 PQLC2Q6ZP29 291 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 CXorf65A6NEN9 183 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 STAG3L3P0CL85 134 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 DLX4Q92988 240 aaPredicted RBP8.43□□□□□ -1.06
CHD3-202ENST00000358181 IGKV1D-33P01593 117 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 IGKV1-33P01594 117 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 LRTM2Q8N967 370 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 MS4A3Q96HJ5 214 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 SDF2L1Q9HCN8 221 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 ZNF107Q9UII5 783 aaPredicted RBP8.43□□□□□ -1.06
CHD3-202ENST00000358181 A0A087WX48 190 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 H7C1H1 209 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 OGG1O15527 345 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 HBDP02042 147 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 GPR183P32249 361 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 NKG7Q16617 165 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 ZNF818PQ6ZRF7 136 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 FAM110DQ8TAY7 271 aaPredicted RBP8.43□□□□□ -1.06
CHD3-202ENST00000358181 SCGB3A1Q96QR1 104 aa8.43□□□□□ -1.06
CHD3-202ENST00000358181 KBTBD11-OT1A0A1B0GTJ5 212 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 TGIF1Q15583 401 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 ZNF562Q6V9R5 426 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 GOLT1AQ6ZVE7 132 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 ANGPTL4Q9BY76 406 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 TRAV24A0A0B4J272 114 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 NKX2-6A6NCS4 301 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 C21orf140B9A014 251 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 PRB2P02812 416 aaPredicted RBP8.42□□□□□ -1.06
CHD3-202ENST00000358181 ZNFX1Q9P2E3 1918 aaKnown RBP8.42□□□□□ -1.06
CHD3-202ENST00000358181 RPS11P62280 158 aaKnown RBP eCLIP8.42□□□□□ -1.06
CHD3-202ENST00000358181 LINC01555Q8NAE3 123 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 ZNF707Q96C28 371 aaPredicted RBP8.42□□□□□ -1.06
CHD3-202ENST00000358181 ANKRD31Q8N7Z5 1873 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 NAPSAO96009 420 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 ACSF3Q4G176 576 aaPredicted RBP8.42□□□□□ -1.06
CHD3-202ENST00000358181 INO80CQ6PI98 192 aaPredicted RBP8.42□□□□□ -1.06
CHD3-202ENST00000358181 NFAM1Q8NET5 270 aaPredicted RBP8.42□□□□□ -1.06
CHD3-202ENST00000358181 SLC25A2Q9BXI2 301 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 TMEM126AQ9H061 195 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 OR5AC2Q9NZP5 309 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 A0A0A6YYD5 115 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 HBZP02008 142 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 P2RY4P51582 365 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 RAE1P78406 368 aaKnown RBP8.42□□□□□ -1.06
CHD3-202ENST00000358181 OR2Y1Q8NGV0 311 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 NT5CQ8TCD5 201 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 FAM60AQ9NP50 221 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 TRAV2A0A0B4J234 112 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 SOCS1O15524 211 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 TOMM40O96008 361 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 CELA2AP08217 269 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 KLK2P20151 261 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 TMEM50BP56557 158 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 ZP4Q12836 540 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 WDR82Q6UXN9 313 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 ZNF600Q6ZNG1 722 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 CYSLTR1Q9Y271 337 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 TDRD6O60522 2096 aaKnown RBP8.42□□□□□ -1.06
CHD3-202ENST00000358181 ZNF831Q5JPB2 1677 aa8.42□□□□□ -1.06
CHD3-202ENST00000358181 NPIPB11E5RHQ5 1161 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 SCN7AQ01118 1682 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 CBLN1P23435 193 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 BTG1P62324 171 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 IDI2-AS1Q9NZ38 188 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 SMIM13P0DJ93 91 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 UCP2P55851 309 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 FBXW9Q5XUX1 488 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 TMEM167AQ8TBQ9 72 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 RASL10BQ96S79 203 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 FOXA2Q9Y261 457 aaPredicted RBP8.41□□□□□ -1.06
CHD3-202ENST00000358181 CASP8AP2Q9UKL3 1982 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 CT62P0C5K7 136 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 UQCC3Q6UW78 93 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 C1QL2Q7Z5L3 287 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 HS3ST3B1Q9Y662 390 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 ZNF98A6NK75 572 aa8.41□□□□□ -1.06
CHD3-202ENST00000358181 MAJINQ3KP22 176 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms