RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 SIRPDQ9H106 197 aa13.86□□□□□ -0.19
TPM1-205ENST00000357980 MARCH11A6NNE9 402 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 K7EPK0 472 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 ATG12O94817 140 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 SMCO1Q147U7 214 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 CLEC12BQ2HXU8 276 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 FAM71E2Q8N5Q1 922 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 CACNG5Q9UF02 275 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 NAV2Q8IVL1 2488 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 RNF222A6NCQ9 220 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 BUB1B-PAK6H3BSN5 160 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 SNAPC5O75971 98 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 SCGB1D2O95969 90 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 MMP9P14780 707 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 IL3RAP26951 378 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 REG1BP48304 166 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 CXorf66Q5JRM2 361 aaPredicted RBP13.85□□□□□ -0.19
TPM1-205ENST00000357980 VMO1Q7Z5L0 202 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 FOXRED2Q8IWF2 684 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 OR5AN1Q8NGI8 311 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 R3HDM4Q96D70 268 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 NABP2Q9BQ15 211 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 COA4Q9NYJ1 87 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 RCL1Q9Y2P8 373 aaKnown RBP13.85□□□□□ -0.19
TPM1-205ENST00000357980 POMT1Q9Y6A1 747 aa13.85□□□□□ -0.19
TPM1-205ENST00000357980 ODF3BA8MYP8 253 aa13.84□□□□□ -0.19
TPM1-205ENST00000357980 H0YJW9 148 aa13.84□□□□□ -0.19
TPM1-205ENST00000357980 ST8SIA3O43173 380 aa13.84□□□□□ -0.19
TPM1-205ENST00000357980 CRYZL1O95825 349 aa13.84□□□□□ -0.19
TPM1-205ENST00000357980 NKX2-1P43699 371 aaPredicted RBP13.84□□□□□ -0.19
TPM1-205ENST00000357980 ID3Q02535 119 aa13.84□□□□□ -0.19
TPM1-205ENST00000357980 DEFB113Q30KQ7 82 aa13.84□□□□□ -0.19
TPM1-205ENST00000357980 DCUN1D4Q92564 292 aa13.84□□□□□ -0.19
TPM1-205ENST00000357980 MFFQ9GZY8 342 aa13.84□□□□□ -0.19
TPM1-205ENST00000357980 HEXA-AS1Q9H8Q6 139 aa13.84□□□□□ -0.19
TPM1-205ENST00000357980 ZFP57Q9NU63 452 aa13.84□□□□□ -0.19
TPM1-205ENST00000357980 LSM5Q9Y4Y9 91 aaKnown RBP13.84□□□□□ -0.19
TPM1-205ENST00000357980 LY6LH3BQJ8 138 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 L7N2F9 121 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 IGKV1-16P04430 117 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 SLC25A16P16260 332 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 KLRD1Q13241 179 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 ZNF345Q14585 488 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 RTL8BQ17RB0 113 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 MIDNQ504T8 468 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 DHRS7BQ6IAN0 325 aaPredicted RBP13.83□□□□□ -0.2
TPM1-205ENST00000357980 TGIF2LXQ8IUE1 241 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 LRRC75A-AS1Q8N1F1 130 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 PCGF1Q9BSM1 259 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 SLC35D1Q9NTN3 355 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 AMMECR1Q9Y4X0 333 aaPredicted RBP13.83□□□□□ -0.2
TPM1-205ENST00000357980 A0A096LNT2 108 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 KCNAB3O43448 404 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 NQO2P16083 231 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 HOXB4P17483 251 aaPredicted RBP13.83□□□□□ -0.2
TPM1-205ENST00000357980 IFITM2Q01629 132 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 TAGLNQ01995 201 aaKnown RBP13.83□□□□□ -0.2
TPM1-205ENST00000357980 LDLRAD2Q5SZI1 272 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 H2BFWTQ7Z2G1 175 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 RBMXL1Q96E39 390 aaKnown RBP13.83□□□□□ -0.2
TPM1-205ENST00000357980 C11orf1Q9H5F2 150 aa13.83□□□□□ -0.2
TPM1-205ENST00000357980 RLN2P04090 185 aa13.82□□□□□ -0.2
TPM1-205ENST00000357980 DVL1P1P54792 670 aaPredicted RBP13.82□□□□□ -0.2
TPM1-205ENST00000357980 POU2AF1Q16633 256 aa13.82□□□□□ -0.2
TPM1-205ENST00000357980 ACOT7LQ6ZUV0 252 aa13.82□□□□□ -0.2
TPM1-205ENST00000357980 DMBX1Q8NFW5 382 aa13.82□□□□□ -0.2
TPM1-205ENST00000357980 MBD6Q96DN6 1003 aa13.82□□□□□ -0.2
TPM1-205ENST00000357980 LPAR2Q9HBW0 351 aa13.82□□□□□ -0.2
TPM1-205ENST00000357980 INSIG2Q9Y5U4 225 aa13.82□□□□□ -0.2
TPM1-205ENST00000357980 MSGN1A6NI15 193 aa13.81□□□□□ -0.2
TPM1-205ENST00000357980 RNASEK-C17orf49H0YIS7 233 aa13.81□□□□□ -0.2
TPM1-205ENST00000357980 OR2F2O95006 317 aa13.81□□□□□ -0.2
TPM1-205ENST00000357980 APOA2P02652 100 aa13.81□□□□□ -0.2
TPM1-205ENST00000357980 ARG1P05089 322 aa13.81□□□□□ -0.2
TPM1-205ENST00000357980 RRASP10301 218 aa13.81□□□□□ -0.2
TPM1-205ENST00000357980 USF1P22415 310 aaPredicted RBP13.81□□□□□ -0.2
TPM1-205ENST00000357980 POLR2GP62487 172 aaKnown RBP eCLIP13.81□□□□□ -0.2
TPM1-205ENST00000357980 OR2F1Q13607 317 aa13.81□□□□□ -0.2
TPM1-205ENST00000357980 TMUB2Q71RG4 321 aa13.81□□□□□ -0.2
TPM1-205ENST00000357980 VKORC1L1Q8N0U8 176 aa13.81□□□□□ -0.2
TPM1-205ENST00000357980 KCNRGQ8N5I3 272 aa13.81□□□□□ -0.2
TPM1-205ENST00000357980 INO80EQ8NBZ0 244 aaPredicted RBP13.81□□□□□ -0.2
TPM1-205ENST00000357980 TBX15Q96SF7 602 aa13.81□□□□□ -0.2
TPM1-205ENST00000357980 FAM90A9PA6NNJ1 464 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 E5RGE8 158 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 TOX4O94842 621 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 NXPH3O95157 252 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 S100A11P31949 105 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 ERVK-16P61578 105 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 RHOVQ96L33 236 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 AQP10Q96PS8 301 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 MAGT1Q9H0U3 335 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 NSG2Q9Y328 171 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 A0A0D9SG52 128 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 TXNL1O43396 289 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 OR9G9P0C7N8 305 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 AP2S1P53680 142 aaPredicted RBP13.8□□□□□ -0.2
TPM1-205ENST00000357980 PAX8Q06710 450 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 AARDQ4LEZ3 155 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 SSX9Q7RTT3 188 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms