RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 LIFP15018 202 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 CRYBB3P26998 211 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 PCMT1P22061 227 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 RAB9AP51151 201 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 ZNF415Q09FC8 603 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 OR10AG1Q8NH19 301 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 SELENOTP62341 195 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 SNAI3Q3KNW1 292 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 INO80CQ6PI98 192 aaPredicted RBP9.1□□□□□ -0.95
FXR1-202ENST00000357559 OR4D11Q8NGI4 311 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 VGLL1Q99990 258 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 CBLN4Q9NTU7 201 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 ARAP2Q8WZ64 1704 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 CDK2AP2O75956 126 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 A0A0U1RRA0 63 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 J3QT63 122 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 CA1P00915 261 aaPredicted RBP9.1□□□□□ -0.95
FXR1-202ENST00000357559 TRGV3P03979 118 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 NSUN5P1Q3KNT7 163 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 LINC01560Q8TB33 94 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 EEF1AKMT3Q96AZ1 226 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 NXT2Q9NPJ8 142 aaKnown RBP9.1□□□□□ -0.95
FXR1-202ENST00000357559 MUC1P15941 1255 aaPredicted RBP9.1□□□□□ -0.95
FXR1-202ENST00000357559 CNTFRP26992 372 aa9.1□□□□□ -0.95
FXR1-202ENST00000357559 PLPPR5Q32ZL2 321 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 UBE2DNLQ8IWF7 75 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 LINC00862A6NCI5 91 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 NKX2-8O15522 239 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 HBBP68871 147 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 PLCH1Q4KWH8 1693 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 PRELID3AQ96N28 172 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 SRD5A1P18405 259 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 BCL2P10415 239 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 FOLR2P14207 255 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 ZNF250P15622 560 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 SLC25A20O43772 301 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 LSM6P62312 80 aaKnown RBP9.09□□□□□ -0.95
FXR1-202ENST00000357559 LINC00596Q86U02 117 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 ABHD12Q8N2K0 398 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 PNKDQ8N490 385 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 KCNK17Q96T54 332 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 COL11A1P12107 1806 aaPredicted RBP9.09□□□□□ -0.95
FXR1-202ENST00000357559 NPPCP23582 126 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 RPS11P62280 158 aaKnown RBP eCLIP9.09□□□□□ -0.95
FXR1-202ENST00000357559 DCAF10Q5QP82 559 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 ATP1A1-AS1Q5TC04 95 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 DCAF12L2Q5VW00 463 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 C14orf144Q96I85 54 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 TMEM106BQ9NUM4 274 aa9.09□□□□□ -0.95
FXR1-202ENST00000357559 A0A1B0GV90 55 aa9.09□□□□□ -0.96
FXR1-202ENST00000357559 FHL5Q5TD97 284 aa9.09□□□□□ -0.96
FXR1-202ENST00000357559 WDR82Q6UXN9 313 aa9.09□□□□□ -0.96
FXR1-202ENST00000357559 C12orf54Q6X4T0 127 aa9.09□□□□□ -0.96
FXR1-202ENST00000357559 ZPLD1Q8TCW7 415 aa9.09□□□□□ -0.96
FXR1-202ENST00000357559 MARVELD1Q9BSK0 173 aa9.09□□□□□ -0.96
FXR1-202ENST00000357559 CDC42EP3Q9UKI2 254 aa9.09□□□□□ -0.96
FXR1-202ENST00000357559 KLHDC2Q9Y2U9 406 aa9.09□□□□□ -0.96
FXR1-202ENST00000357559 SCN7AQ01118 1682 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 ACSF3Q4G176 576 aaPredicted RBP9.08□□□□□ -0.96
FXR1-202ENST00000357559 LINC00305Q7Z4B0 112 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 OR51M1Q9H341 326 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 RBMY1BA6NDE4 496 aaKnown RBP9.08□□□□□ -0.96
FXR1-202ENST00000357559 RBMY1EA6NEQ0 496 aaKnown RBP9.08□□□□□ -0.96
FXR1-202ENST00000357559 IGLV3-25P01717 112 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 RBMY1DP0C7P1 496 aaKnown RBP9.08□□□□□ -0.96
FXR1-202ENST00000357559 SMIM6P0DI80 62 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 RBMY1A1P0DJD3 496 aaKnown RBP9.08□□□□□ -0.96
FXR1-202ENST00000357559 RBMY1CP0DJD4 496 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 TSPOP30536 169 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 SLC25A34Q6PIV7 304 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 C3orf36Q3SXR2 165 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 COX19Q49B96 90 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 DEGS2Q6QHC5 323 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 RFLNBQ8N5W9 214 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 KIF26BQ2KJY2 2108 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 ZAR1Q86SH2 424 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 ATG4DQ86TL0 474 aaPredicted RBP9.08□□□□□ -0.96
FXR1-202ENST00000357559 C9orf40Q8IXQ3 194 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 KCNS1Q96KK3 526 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 FOXJ2Q9P0K8 574 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 C21orf140B9A014 251 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 HLA-DRB1P01911 266 aa9.08□□□□□ -0.96
FXR1-202ENST00000357559 PCOLCEQ15113 449 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 FAM71F2Q6NXP2 309 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 UNC119Q13432 240 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 ZNF430Q9H8G1 570 aaPredicted RBP9.07□□□□□ -0.96
FXR1-202ENST00000357559 GTF3C1Q12789 2109 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 LOC390937A0A1W2PQ73 354 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 SHISA5Q8N114 240 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 SFTPCP11686 197 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 PCSK4Q6UW60 755 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 DNAJC4Q9NNZ3 241 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 SEC16AO15027 2179 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 EGR1P18146 543 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 FGF9P31371 208 aaPredicted RBP9.07□□□□□ -0.96
FXR1-202ENST00000357559 PDLIM4P50479 330 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 C9orf62Q8N4C0 152 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 IDI2-AS1Q9NZ38 188 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 ZG16O60844 167 aa9.07□□□□□ -0.96
FXR1-202ENST00000357559 FOXA3P55318 350 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms