RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 VAX1Q5SQQ9 334 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 GLDNQ6ZMI3 551 aaPredicted RBP3.15□□□□□ -1.91
CNOT4-202ENST00000356162 ZNF66Q6ZN08 573 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 OVCH2Q7RTZ1 564 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 FAM71E2Q8N5Q1 922 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 KLHDC1Q8N7A1 406 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 ZNF383Q8NA42 475 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 NPBQ8NG41 125 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 OR52I2Q8NH67 350 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 GIMAP1Q8WWP7 306 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 DDB2Q92466 427 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 MOB3AQ96BX8 217 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 DIRAS2Q96HU8 199 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 HSD17B10Q99714 261 aaKnown RBP3.15□□□□□ -1.91
CNOT4-202ENST00000356162 RASL11BQ9BPW5 248 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 DCUN1D5Q9BTE7 237 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 SERTAD4Q9NUC0 356 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 KIAA1456Q9P272 454 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 MTFP1Q9UDX5 166 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 RNF150Q9ULK6 438 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 CUBNO60494 3623 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 ZFHX3Q15911 3703 aa3.15□□□□□ -1.91
CNOT4-202ENST00000356162 ZNF736B4DX44 427 aaPredicted RBP3.14□□□□□ -1.91
CNOT4-202ENST00000356162 PROP1O75360 226 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 IGHG2P01859 326 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 HLA-DRB1P01911 266 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 PMP2P02689 132 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 CD74P04233 296 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 DUTP33316 252 aaKnown RBP3.14□□□□□ -1.91
CNOT4-202ENST00000356162 S100A5P33763 92 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 HRH1P35367 487 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 TAS2R19P59542 299 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 DGCR2P98153 550 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 IL18Q14116 193 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 HNF4GQ14541 408 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 ABCA11PQ4W5N1 156 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 TMEM177Q53S58 311 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 RNASE12Q5GAN4 147 aaKnown RBP3.14□□□□□ -1.91
CNOT4-202ENST00000356162 C9orf152Q5JTZ5 239 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 ZNF660Q6AZW8 331 aaPredicted RBP3.14□□□□□ -1.91
CNOT4-202ENST00000356162 KCTD9Q7L273 389 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 SLC35E3Q7Z769 313 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 TMEM229BQ8NBD8 167 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 WIPF2Q8TF74 440 aaPredicted RBP3.14□□□□□ -1.91
CNOT4-202ENST00000356162 SECTM1Q8WVN6 248 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 FCAMRQ8WWV6 532 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 TAF15Q92804 592 aaKnown RBP eCLIP3.14□□□□□ -1.91
CNOT4-202ENST00000356162 DGCR14Q96DF8 476 aaKnown RBP3.14□□□□□ -1.91
CNOT4-202ENST00000356162 CITED1Q99966 193 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 SOSTQ9BQB4 213 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 SLC5A7Q9GZV3 580 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 PLSCR3Q9NRY6 295 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 SIGLEC9Q9Y336 463 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 PRELID3BQ9Y3B1 194 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 JMJD1CQ15652 2540 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 DNHD1Q96M86 4753 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 DPPA5A6NC42 116 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 NCBP2LA6PVI3 153 aaKnown RBP3.14□□□□□ -1.91
CNOT4-202ENST00000356162 H7C2Y5 167 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 RRHO14718 337 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 FCER2P06734 321 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 CSF1P09603 554 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 TNFSF8P32971 234 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 ECI1P42126 302 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 CRIP2P52943 208 aaPredicted RBP3.14□□□□□ -1.91
CNOT4-202ENST00000356162 UCP3P55916 312 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 FXYD4P59646 89 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 BLCAPP62952 87 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 CATR1Q13166 79 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 MEF2DQ14814 521 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 C5orf64Q2M2E5 130 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 TMEM95Q3KNT9 176 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 RNASE10Q5GAN6 216 aaKnown RBP3.14□□□□□ -1.91
CNOT4-202ENST00000356162 DHRS11Q6UWP2 260 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 CCDC190Q86UF4 302 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 TMEM17Q86X19 198 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 FOXRED2Q8IWF2 684 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 ARRDC1Q8N5I2 433 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 COMMD1Q8N668 190 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 BVESQ8NE79 360 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 OR4S2Q8NH73 311 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 CHPT1Q8WUD6 406 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 TCTEX1D2Q8WW35 142 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 HARBI1Q96MB7 349 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 ABHD1Q96SE0 405 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 ZNF2Q9BSG1 426 aaPredicted RBP3.14□□□□□ -1.91
CNOT4-202ENST00000356162 TAS2R8Q9NYW2 309 aa3.14□□□□□ -1.91
CNOT4-202ENST00000356162 SETD2Q9BYW2 2564 aaPredicted RBP3.14□□□□□ -1.91
CNOT4-202ENST00000356162 TET2Q6N021 2002 aaPredicted RBP3.14□□□□□ -1.91
CNOT4-202ENST00000356162 SH2D7A6NKC9 451 aaPredicted RBP3.13□□□□□ -1.91
CNOT4-202ENST00000356162 LINC00473A8K010 186 aa3.13□□□□□ -1.91
CNOT4-202ENST00000356162 AP4M1O00189 453 aa3.13□□□□□ -1.91
CNOT4-202ENST00000356162 GPR31O00270 319 aa3.13□□□□□ -1.91
CNOT4-202ENST00000356162 RBFOX2O43251 390 aaKnown RBP eCLIP3.13□□□□□ -1.91
CNOT4-202ENST00000356162 CREBL2O60519 120 aaPredicted RBP3.13□□□□□ -1.91
CNOT4-202ENST00000356162 IGLV2-14P01704 120 aa3.13□□□□□ -1.91
CNOT4-202ENST00000356162 VSIG10L2P0DP72 767 aa3.13□□□□□ -1.91
CNOT4-202ENST00000356162 CNTFRP26992 372 aa3.13□□□□□ -1.91
CNOT4-202ENST00000356162 HLA-DMAP28067 261 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms