RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 PHLDA2Q53GA4 152 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 FBLN7Q53RD9 439 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 CCDC71LQ8N9Z2 235 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 OR51H1Q8NH63 302 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 OR4S2Q8NH73 311 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 OSR1Q8TAX0 266 aaPredicted RBP12.4□□□□□ -0.42
TRIM13-201ENST00000356017 MRGPRFQ96AM1 343 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 TSNAXQ99598 290 aaKnown RBP12.4□□□□□ -0.42
TRIM13-201ENST00000356017 RANBP3Q9H6Z4 567 aaPredicted RBP12.4□□□□□ -0.42
TRIM13-201ENST00000356017 KIAA1456Q9P272 454 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 COPZ2Q9P299 210 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 GPR132Q9UNW8 380 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 JMJD1CQ15652 2540 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 SHOXO15266 292 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 NBR2O15453 112 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 RBFOX2O43251 390 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRIM13-201ENST00000356017 F2RP25116 425 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 RBMS2Q15434 407 aaKnown RBP12.4□□□□□ -0.42
TRIM13-201ENST00000356017 TMEM177Q53S58 311 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 C11orf88Q6PI97 169 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 SPAG16Q8N0X2 631 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 NPBQ8NG41 125 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 TMEM158Q8WZ71 300 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 GPHA2Q96T91 129 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 PLSCR3Q9NRY6 295 aa12.4□□□□□ -0.42
TRIM13-201ENST00000356017 LIN7CQ9NUP9 197 aaKnown RBP12.4□□□□□ -0.42
TRIM13-201ENST00000356017 MPPED1O15442 326 aa12.39□□□□□ -0.43
TRIM13-201ENST00000356017 PLA2G10O15496 165 aa12.39□□□□□ -0.43
TRIM13-201ENST00000356017 LYRM1O43325 122 aa12.39□□□□□ -0.43
TRIM13-201ENST00000356017 SPDEFO95238 335 aa12.39□□□□□ -0.43
TRIM13-201ENST00000356017 CRYZL1O95825 349 aa12.39□□□□□ -0.43
TRIM13-201ENST00000356017 PI3P19957 117 aa12.39□□□□□ -0.43
TRIM13-201ENST00000356017 F2RL1P55085 397 aa12.39□□□□□ -0.43
TRIM13-201ENST00000356017 TBC1D26Q86UD7 250 aa12.39□□□□□ -0.43
TRIM13-201ENST00000356017 RITA1Q96K30 269 aa12.39□□□□□ -0.43
TRIM13-201ENST00000356017 HARBI1Q96MB7 349 aa12.39□□□□□ -0.43
TRIM13-201ENST00000356017 RASL11BQ9BPW5 248 aa12.39□□□□□ -0.43
TRIM13-201ENST00000356017 AIFM2Q9BRQ8 373 aa12.39□□□□□ -0.43
TRIM13-201ENST00000356017 PRSS22Q9GZN4 317 aa12.39□□□□□ -0.43
TRIM13-201ENST00000356017 FAM212BQ9NTI7 297 aaPredicted RBP12.39□□□□□ -0.43
TRIM13-201ENST00000356017 B3GALNT1O75752 331 aa12.38□□□□□ -0.43
TRIM13-201ENST00000356017 TSPAN9O75954 239 aa12.38□□□□□ -0.43
TRIM13-201ENST00000356017 NDUFA3O95167 84 aa12.38□□□□□ -0.43
TRIM13-201ENST00000356017 OR2B11Q5JQS5 317 aa12.38□□□□□ -0.43
TRIM13-201ENST00000356017 FAM71E2Q8N5Q1 922 aa12.38□□□□□ -0.43
TRIM13-201ENST00000356017 C5orf56Q8N8D9 126 aa12.38□□□□□ -0.43
TRIM13-201ENST00000356017 RTBDNQ9BSG5 229 aaPredicted RBP12.38□□□□□ -0.43
TRIM13-201ENST00000356017 C5orf66Q9H5L9 145 aa12.38□□□□□ -0.43
TRIM13-201ENST00000356017 PEX14O75381 377 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 NDUFA7O95182 113 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 HPRT1P00492 218 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 HKR1P10072 659 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 BRWD1-AS2P59051 145 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 MZT2BQ6NZ67 158 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 Q8N9W7 124 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 RRHO14718 337 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 RAMP3O60896 148 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 HRASP01112 189 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 AMY1AP04745 511 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 CCR6P51684 374 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 BLCAPP62952 87 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 ASAH1Q13510 395 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 DCTN2Q13561 401 aaKnown RBP12.37□□□□□ -0.43
TRIM13-201ENST00000356017 PLGLAQ15195 96 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 C5orf64Q2M2E5 130 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 KRTAP24-1Q3LI83 254 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.37□□□□□ -0.43
TRIM13-201ENST00000356017 OR4F5Q8NH21 305 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 RBMXL1Q96E39 390 aaKnown RBP12.37□□□□□ -0.43
TRIM13-201ENST00000356017 PLEKHA2Q9HB19 425 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 VSIG4Q9Y279 399 aa12.37□□□□□ -0.43
TRIM13-201ENST00000356017 TEX13DA0A0J9YY54 714 aaPredicted RBP12.36□□□□□ -0.43
TRIM13-201ENST00000356017 C3orf85A0A1B0GTC6 90 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 A0A1B0GVG6 124 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 H0Y980 276 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 NDUFB6O95139 128 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 SERPINE2P07093 398 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 CNTFRP26992 372 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 RAG2P55895 527 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 TAS2R31P59538 309 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 DEFA1P59665 94 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 DEFA3P59666 94 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 RELBQ01201 579 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 FOXL1Q12952 345 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 PSG5Q15238 335 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 VMA21Q3ZAQ7 101 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 LIN54Q6MZP7 749 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 Q6ZSV7 163 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 Q8N2B8 174 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 OR2T6Q8NHC8 308 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 VSTM2AQ8TAG5 236 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 C16orf95Q9H693 158 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 COMMD9Q9P000 198 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 KCNIP3Q9Y2W7 256 aa12.36□□□□□ -0.43
TRIM13-201ENST00000356017 A0A1B0GUS0 222 aa12.35□□□□□ -0.43
TRIM13-201ENST00000356017 IGLV2-23P01705 113 aa12.35□□□□□ -0.43
TRIM13-201ENST00000356017 RPA2P15927 270 aa12.35□□□□□ -0.43
TRIM13-201ENST00000356017 NQO2P16083 231 aa12.35□□□□□ -0.43
TRIM13-201ENST00000356017 SLC6A1P30531 599 aa12.35□□□□□ -0.43
TRIM13-201ENST00000356017 BTCP35070 178 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms