RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 RORCP51449 518 aa12.15□□□□□ -0.46
PDGFA-201ENST00000354513 PITPNAQ00169 270 aa12.15□□□□□ -0.46
PDGFA-201ENST00000354513 PLA2G7Q13093 441 aa12.15□□□□□ -0.46
PDGFA-201ENST00000354513 SRSF7Q16629 238 aaKnown RBP eCLIP12.15□□□□□ -0.46
PDGFA-201ENST00000354513 C2orf76Q3KRA6 126 aa12.15□□□□□ -0.46
PDGFA-201ENST00000354513 PYHIN1Q6K0P9 492 aa12.15□□□□□ -0.46
PDGFA-201ENST00000354513 ZNF562Q6V9R5 426 aa12.15□□□□□ -0.46
PDGFA-201ENST00000354513 DGCR14Q96DF8 476 aaKnown RBP12.15□□□□□ -0.46
PDGFA-201ENST00000354513 RNF5Q99942 180 aa12.15□□□□□ -0.46
PDGFA-201ENST00000354513 PLEKHJ1Q9NW61 149 aa12.15□□□□□ -0.46
PDGFA-201ENST00000354513 HYDINQ4G0P3 5121 aa12.14□□□□□ -0.47
PDGFA-201ENST00000354513 A6NHS1 94 aa12.14□□□□□ -0.47
PDGFA-201ENST00000354513 SPDEFO95238 335 aa12.14□□□□□ -0.47
PDGFA-201ENST00000354513 IGLV2-23P01705 113 aa12.14□□□□□ -0.47
PDGFA-201ENST00000354513 CEACAM6P40199 344 aa12.14□□□□□ -0.47
PDGFA-201ENST00000354513 DEFA5Q01523 94 aa12.14□□□□□ -0.47
PDGFA-201ENST00000354513 MRGPRG-AS1Q2M3A8 158 aa12.14□□□□□ -0.47
PDGFA-201ENST00000354513 PLAC9Q5JTB6 97 aa12.14□□□□□ -0.47
PDGFA-201ENST00000354513 ARHGAP5-AS1Q96IT6 56 aa12.14□□□□□ -0.47
PDGFA-201ENST00000354513 PECRQ9BY49 303 aa12.14□□□□□ -0.47
PDGFA-201ENST00000354513 BATF3Q9NR55 127 aa12.14□□□□□ -0.47
PDGFA-201ENST00000354513 C19orf73Q9NVV2 129 aa12.14□□□□□ -0.47
PDGFA-201ENST00000354513 HSF4Q9ULV5 492 aa12.14□□□□□ -0.47
PDGFA-201ENST00000354513 PLECQ15149 4684 aaKnown RBP12.14□□□□□ -0.47
PDGFA-201ENST00000354513 TMEM272A0A1B0GTI8 110 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 SLC25A17O43808 307 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 TMEM127O75204 238 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 TRGV3P03979 118 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 CRYGBP07316 175 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 IGHV4-30-4P0DP06 118 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 ZBTB25P24278 435 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 TMEM267Q0VDI3 215 aaPredicted RBP12.13□□□□□ -0.47
PDGFA-201ENST00000354513 PJVKQ0ZLH3 352 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 IL34Q6ZMJ4 242 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 PDPNQ86YL7 162 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 LGALS14Q8TCE9 139 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 DYNC2LI1Q8TCX1 351 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 EDARADDQ8WWZ3 215 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 FLYWCH2Q96CP2 140 aaKnown RBP12.13□□□□□ -0.47
PDGFA-201ENST00000354513 GHITMQ9H3K2 345 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 RIMS4Q9H426 269 aaPredicted RBP12.13□□□□□ -0.47
PDGFA-201ENST00000354513 SLA2Q9H6Q3 261 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 EDA2RQ9HAV5 297 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 ADAM30Q9UKF2 790 aa12.13□□□□□ -0.47
PDGFA-201ENST00000354513 LDLRAD4O15165 306 aa12.12□□□□□ -0.47
PDGFA-201ENST00000354513 RBMXL2O75526 392 aaKnown RBP12.12□□□□□ -0.47
PDGFA-201ENST00000354513 ZNF182P17025 639 aaPredicted RBP12.12□□□□□ -0.47
PDGFA-201ENST00000354513 POC5Q8NA72 575 aa12.12□□□□□ -0.47
PDGFA-201ENST00000354513 GRPEL2Q8TAA5 225 aa12.12□□□□□ -0.47
PDGFA-201ENST00000354513 CITED4Q96RK1 184 aa12.12□□□□□ -0.47
PDGFA-201ENST00000354513 TSNAXQ99598 290 aaKnown RBP12.12□□□□□ -0.47
PDGFA-201ENST00000354513 THAP7Q9BT49 309 aaPredicted RBP12.12□□□□□ -0.47
PDGFA-201ENST00000354513 C12orf4Q9NQ89 552 aa12.12□□□□□ -0.47
PDGFA-201ENST00000354513 RDH8Q9NYR8 311 aa12.12□□□□□ -0.47
PDGFA-201ENST00000354513 CCDC59Q9P031 241 aaKnown RBP12.12□□□□□ -0.47
PDGFA-201ENST00000354513 RAB22AQ9UL26 194 aa12.12□□□□□ -0.47
PDGFA-201ENST00000354513 A8MZ25 164 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 HSPA12AO43301 675 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 CD3GP09693 182 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 VEGFCP49767 419 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 FXYD3Q14802 87 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 OR5H6Q8NGV6 325 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 AP3S1Q92572 193 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 KCTD12Q96CX2 325 aaKnown RBP12.11□□□□□ -0.47
PDGFA-201ENST00000354513 OR4C12Q96R67 309 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 DCUN1D5Q9BTE7 237 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 URM1Q9BTM9 101 aaKnown RBP12.11□□□□□ -0.47
PDGFA-201ENST00000354513 KCNK7Q9Y2U2 307 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 ALMS1Q8TCU4 4167 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 M0R1X1 148 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 TRBV12-3P01733 135 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 RAB6AP20340 208 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 SCAND1P57086 179 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 RPS16P62249 146 aaKnown RBP12.11□□□□□ -0.47
PDGFA-201ENST00000354513 KLF5Q13887 457 aaPredicted RBP12.11□□□□□ -0.47
PDGFA-201ENST00000354513 MOGAT2Q3SYC2 334 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 MZT2AQ6P582 158 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 OR5T1Q8NG75 326 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 ACOT12Q8WYK0 555 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 CMSS1Q9BQ75 279 aaKnown RBP12.11□□□□□ -0.47
PDGFA-201ENST00000354513 CABLES2Q9BTV7 478 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 SLC35D1Q9NTN3 355 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 MGAT4AQ9UM21 535 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 SPATA2Q9UM82 520 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 ETV7Q9Y603 341 aa12.11□□□□□ -0.47
PDGFA-201ENST00000354513 BIRC6Q9NR09 4857 aa12.1□□□□□ -0.47
PDGFA-201ENST00000354513 TNCP24821 2201 aa12.1□□□□□ -0.47
PDGFA-201ENST00000354513 LCE6AA0A183 80 aa12.1□□□□□ -0.47
PDGFA-201ENST00000354513 ANKRD34BA5PLL1 514 aa12.1□□□□□ -0.47
PDGFA-201ENST00000354513 TRDCB7Z8K6 153 aa12.1□□□□□ -0.47
PDGFA-201ENST00000354513 H3BUA1 57 aa12.1□□□□□ -0.47
PDGFA-201ENST00000354513 LYL1P12980 280 aa12.1□□□□□ -0.47
PDGFA-201ENST00000354513 DYRK1AQ13627 763 aa12.1□□□□□ -0.47
PDGFA-201ENST00000354513 ZMAT4Q9H898 229 aa12.1□□□□□ -0.47
PDGFA-201ENST00000354513 SDHAF2Q9NX18 166 aa12.1□□□□□ -0.47
PDGFA-201ENST00000354513 COMMD3Q9UBI1 195 aa12.1□□□□□ -0.47
PDGFA-201ENST00000354513 ZNF221Q9UK13 617 aa12.1□□□□□ -0.47
PDGFA-201ENST00000354513 METTL21EPA6NDL7 271 aa12.09□□□□□ -0.47
PDGFA-201ENST00000354513 SRRM4A7MD48 611 aaKnown RBP12.09□□□□□ -0.47
PDGFA-201ENST00000354513 BRI3O95415 125 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms