RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 FAM180AQ6UWF9 173 aa18.37■□□□□ 0.53
UPF3A-201ENST00000351487 IGLV3-9A0A075B6K5 115 aa18.36■□□□□ 0.53
UPF3A-201ENST00000351487 C15orf62A8K5M9 175 aa18.36■□□□□ 0.53
UPF3A-201ENST00000351487 LHBP01229 141 aa18.36■□□□□ 0.53
UPF3A-201ENST00000351487 CRYAAP02489 173 aa18.36■□□□□ 0.53
UPF3A-201ENST00000351487 OR9G9P0C7N8 305 aa18.36■□□□□ 0.53
UPF3A-201ENST00000351487 CD81P60033 236 aa18.36■□□□□ 0.53
UPF3A-201ENST00000351487 WDR25Q64LD2 544 aaPredicted RBP18.36■□□□□ 0.53
UPF3A-201ENST00000351487 OR10G9Q8NGN4 311 aa18.36■□□□□ 0.53
UPF3A-201ENST00000351487 OR10G7Q8NGN6 311 aa18.36■□□□□ 0.53
UPF3A-201ENST00000351487 QTRT1Q9BXR0 403 aaKnown RBP18.36■□□□□ 0.53
UPF3A-201ENST00000351487 NCOR1P1Q9H4R4 102 aa18.36■□□□□ 0.53
UPF3A-201ENST00000351487 SLC25A22Q9H936 323 aa18.36■□□□□ 0.53
UPF3A-201ENST00000351487 URGCP-MRPS24S4R325 110 aa18.36■□□□□ 0.53
UPF3A-201ENST00000351487 DSCAML1Q8TD84 2053 aa18.36■□□□□ 0.53
UPF3A-201ENST00000351487 SPRNQ5BIV9 151 aa18.35■□□□□ 0.53
UPF3A-201ENST00000351487 FFAR4Q5NUL3 377 aa18.35■□□□□ 0.53
UPF3A-201ENST00000351487 Q6ZS92 163 aa18.35■□□□□ 0.53
UPF3A-201ENST00000351487 IGHV3OR15-7A0A075B7D8 119 aa18.35■□□□□ 0.53
UPF3A-201ENST00000351487 FCGR3BO75015 233 aa18.35■□□□□ 0.53
UPF3A-201ENST00000351487 MOGAT3Q86VF5 341 aa18.35■□□□□ 0.53
UPF3A-201ENST00000351487 IFI27L2Q9H2X8 130 aa18.35■□□□□ 0.53
UPF3A-201ENST00000351487 OR6C3Q9NZP0 311 aa18.35■□□□□ 0.53
UPF3A-201ENST00000351487 CNOT1A5YKK6 2376 aaKnown RBP18.35■□□□□ 0.53
UPF3A-201ENST00000351487 TGIF2-C20orf24A0A0A6YYL0 155 aa18.34■□□□□ 0.53
UPF3A-201ENST00000351487 S100A9P06702 114 aaKnown RBP18.34■□□□□ 0.53
UPF3A-201ENST00000351487 KIAA0141Q14154 515 aaPredicted RBP18.34■□□□□ 0.53
UPF3A-201ENST00000351487 HNF4GQ14541 408 aa18.34■□□□□ 0.53
UPF3A-201ENST00000351487 PDLIM3Q53GG5 364 aaPredicted RBP18.34■□□□□ 0.53
UPF3A-201ENST00000351487 SPINK9Q5DT21 86 aa18.34■□□□□ 0.53
UPF3A-201ENST00000351487 C1orf185Q5T7R7 199 aa18.34■□□□□ 0.53
UPF3A-201ENST00000351487 ACTR3CQ9C0K3 210 aaPredicted RBP18.34■□□□□ 0.53
UPF3A-201ENST00000351487 CADP27708 2225 aa18.34■□□□□ 0.53
UPF3A-201ENST00000351487 TMEM250H0YL14 139 aa18.34■□□□□ 0.53
UPF3A-201ENST00000351487 CLDN34H7C241 214 aa18.34■□□□□ 0.53
UPF3A-201ENST00000351487 GATA4P43694 442 aa18.34■□□□□ 0.53
UPF3A-201ENST00000351487 ZNF709Q8N972 641 aa18.34■□□□□ 0.53
UPF3A-201ENST00000351487 ZNRF1Q8ND25 227 aa18.34■□□□□ 0.53
UPF3A-201ENST00000351487 Q8TCH9 128 aa18.34■□□□□ 0.53
UPF3A-201ENST00000351487 MANBALQ9NQG1 85 aa18.34■□□□□ 0.53
UPF3A-201ENST00000351487 C17orf112F2Z3M2 114 aa18.33■□□□□ 0.53
UPF3A-201ENST00000351487 M0R1X1 148 aa18.33■□□□□ 0.53
UPF3A-201ENST00000351487 ITGB1BP1O14713 200 aa18.33■□□□□ 0.53
UPF3A-201ENST00000351487 CGB3P0DN86 165 aa18.33■□□□□ 0.53
UPF3A-201ENST00000351487 CGB7P0DN87 165 aa18.33■□□□□ 0.53
UPF3A-201ENST00000351487 TIMP3P35625 211 aa18.33■□□□□ 0.53
UPF3A-201ENST00000351487 CYP2G1PQ6ZSU1 146 aa18.33■□□□□ 0.53
UPF3A-201ENST00000351487 RPRMLQ8N4K4 120 aa18.33■□□□□ 0.53
UPF3A-201ENST00000351487 OR13D1Q8NGV5 346 aa18.33■□□□□ 0.53
UPF3A-201ENST00000351487 OR52E5Q8NH55 327 aa18.33■□□□□ 0.53
UPF3A-201ENST00000351487 DIRC2Q96SL1 478 aa18.33■□□□□ 0.53
UPF3A-201ENST00000351487 GAB2Q9UQC2 676 aa18.33■□□□□ 0.53
UPF3A-201ENST00000351487 DSCAMO60469 2012 aa18.33■□□□□ 0.52
UPF3A-201ENST00000351487 PSMB3P49720 205 aa18.33■□□□□ 0.52
UPF3A-201ENST00000351487 SPCS3P61009 180 aa18.33■□□□□ 0.52
UPF3A-201ENST00000351487 ZNF674Q2M3X9 581 aa18.33■□□□□ 0.52
UPF3A-201ENST00000351487 PRAMEF5Q5TYX0 476 aa18.33■□□□□ 0.52
UPF3A-201ENST00000351487 Q8N7P7 452 aa18.33■□□□□ 0.52
UPF3A-201ENST00000351487 ITLN1Q8WWA0 313 aa18.33■□□□□ 0.52
UPF3A-201ENST00000351487 CTDSP1Q9GZU7 261 aa18.33■□□□□ 0.52
UPF3A-201ENST00000351487 CALYQ9NYX4 217 aa18.33■□□□□ 0.52
UPF3A-201ENST00000351487 NAT8Q9UHE5 227 aa18.33■□□□□ 0.52
UPF3A-201ENST00000351487 WDR83OSQ9Y284 106 aa18.33■□□□□ 0.52
UPF3A-201ENST00000351487 TANC2Q9HCD6 1990 aa18.32■□□□□ 0.52
UPF3A-201ENST00000351487 KIR2DS2P43631 304 aa18.32■□□□□ 0.52
UPF3A-201ENST00000351487 ZNF134P52741 427 aa18.32■□□□□ 0.52
UPF3A-201ENST00000351487 C1orf87Q8N0U7 546 aa18.32■□□□□ 0.52
UPF3A-201ENST00000351487 FAM222BQ8WU58 562 aa18.32■□□□□ 0.52
UPF3A-201ENST00000351487 CYB5BO43169 146 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 KBTBD11O94819 623 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 EDDM3BP56851 147 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 RPS16P62249 146 aaKnown RBP18.31■□□□□ 0.52
UPF3A-201ENST00000351487 RPL39P5Q59GN2 51 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 RAB24Q969Q5 203 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 PLPPR2Q96GM1 343 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 SMIM7Q9BQ49 75 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 TMPRSS5Q9H3S3 457 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 SPRY3O43610 288 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 CLN5O75503 358 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 HOXA5P20719 270 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 NUBP1P53384 320 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 ERVK-16P61578 105 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 ALKBH2Q6NS38 261 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 SLC16A13Q7RTY0 426 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 DDB2Q92466 427 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 ZNF251Q9BRH9 671 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 SFXN3Q9BWM7 321 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 RAB9BQ9NP90 201 aa18.31■□□□□ 0.52
UPF3A-201ENST00000351487 DSPP15924 2871 aaKnown RBP18.31■□□□□ 0.52
UPF3A-201ENST00000351487 SPENQ96T58 3664 aaKnown RBP18.31■□□□□ 0.52
UPF3A-201ENST00000351487 HMGB3O15347 200 aaKnown RBP18.3■□□□□ 0.52
UPF3A-201ENST00000351487 SOX15O60248 233 aa18.3■□□□□ 0.52
UPF3A-201ENST00000351487 RAB7AP51149 207 aa18.3■□□□□ 0.52
UPF3A-201ENST00000351487 RPP30P78346 268 aaKnown RBP18.3■□□□□ 0.52
UPF3A-201ENST00000351487 RTP5Q14D33 572 aa18.3■□□□□ 0.52
UPF3A-201ENST00000351487 CD1BP29016 333 aa18.3■□□□□ 0.52
UPF3A-201ENST00000351487 PLA2G5P39877 138 aa18.3■□□□□ 0.52
UPF3A-201ENST00000351487 C17orf58Q2M2W7 97 aa18.3■□□□□ 0.52
UPF3A-201ENST00000351487 ACOT6Q3I5F7 207 aaPredicted RBP18.3■□□□□ 0.52
UPF3A-201ENST00000351487 OR4A16Q8NH70 328 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms