RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 GDF15Q99988 308 aa10.39□□□□□ -0.75
COL12A1-202ENST00000345356 CEACAM18A8MTB9 384 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 CLDN14O95500 239 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 CTSSP25774 331 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 WFDC1Q9HC57 220 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 CCL7P80098 99 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 TPRX1Q8N7U7 411 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 MAP1LC3AQ9H492 121 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 SEMA5BQ9P283 1151 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 A0A1W2PRD5 423 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 A0A1W2PRF3 423 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 A0A1W2PRM7 423 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 C1QTNF9P0C862 333 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 GAS1P54826 345 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 SPANXN1Q5VSR9 72 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 LILRA6Q6PI73 481 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 C1QL2Q7Z5L3 287 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 SRSF12Q8WXF0 261 aaKnown RBP10.38□□□□□ -0.75
COL12A1-202ENST00000345356 GLRX2Q9NS18 164 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 TMEM242Q9NWH2 141 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 ANKRD31Q8N7Z5 1873 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 IGHV1OR21-1A0A087WYE8 117 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 SCGB1A1P11684 91 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 SLC25A47Q6Q0C1 308 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 SLC25A40Q8TBP6 338 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 GRAMD2BQ96HH9 432 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 GFI1Q99684 422 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 RP1P56715 2156 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 A0A087WV48 116 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 J3KRW8 73 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 GPR6P46095 362 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-202ENST00000345356 ZNF83P51522 516 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 PSG4Q00888 419 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 RBPJQ06330 500 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 GABRG3Q99928 467 aa10.38□□□□□ -0.75
COL12A1-202ENST00000345356 RRHO14718 337 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 TUSC5Q8IXB3 177 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 MRPL16Q9NX20 251 aaKnown RBP10.37□□□□□ -0.75
COL12A1-202ENST00000345356 ELOVL5Q9NYP7 299 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 ZNF324O75467 553 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-202ENST00000345356 TFF3Q07654 80 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 FHL5Q5TD97 284 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 STPG3Q8N7X2 389 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 NFAM1Q8NET5 270 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-202ENST00000345356 OR4D5Q8NGN0 318 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 TRGV5A0A0B4J1U4 118 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 TRAV8-6A0A0B4J262 113 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 C1QTNF9BB2RNN3 333 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 DCAF10Q5QP82 559 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 F5P12259 2224 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 A8MWP6 167 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 J3QRE1 110 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 TYMSP04818 313 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 GZMBP10144 247 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 UBE2V1Q13404 147 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 PLSCR2Q9NRY7 297 aa10.37□□□□□ -0.75
COL12A1-202ENST00000345356 OR2H2O95918 312 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 TNFAIP6P98066 277 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-202ENST00000345356 KCNMB1Q16558 191 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 RHBDD2Q6NTF9 364 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 ANKRD33Q7Z3H0 272 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 C2orf83Q53S99 150 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 ABHD12Q8N2K0 398 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 TTC9CQ8N5M4 171 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 ZNF525Q8N782 197 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 RND1Q92730 232 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 NABP2Q9BQ15 211 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 TPTE2P1Q5T6R2 138 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 ZADH2Q8N4Q0 377 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 ZNF257Q9Y2Q1 563 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 COX7A1P24310 79 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 SOX8P57073 446 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 EGR4Q05215 589 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 DGAT2L7PQ6IED9 249 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 ANAPC13Q9BS18 74 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 PILRAQ9UKJ1 303 aa10.36□□□□□ -0.75
COL12A1-202ENST00000345356 TSPAN13O95857 204 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 CA7P43166 264 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 SELENOTP62341 195 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 UBTD1Q9HAC8 227 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 DLL3Q9NYJ7 618 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 CRXO43186 299 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-202ENST00000345356 OR5A1Q8NGJ0 315 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 OR2K2Q8NGT1 345 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 ONECUT1Q9UBC0 465 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 CGAP01215 116 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 APOHP02749 345 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-202ENST00000345356 AREGP15514 252 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 COL9A1P20849 921 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 UCP1P25874 307 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 KIAA1217Q5T5P2 1943 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 MAP1BP46821 2468 aaKnown RBP10.35□□□□□ -0.75
COL12A1-202ENST00000345356 ZNHIT1O43257 154 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 IGFBP3P17936 291 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-202ENST00000345356 COL16A1Q07092 1604 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-202ENST00000345356 UMODP07911 640 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 C18orf12Q96KH6 178 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 LOXL2Q9Y4K0 774 aa10.35□□□□□ -0.75
COL12A1-202ENST00000345356 TM2D1Q9BX74 207 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms