RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 A8MWP6 167 aa12.51□□□□□ -0.41
TRA2B-202ENST00000342294 DYNC1I1O14576 645 aa12.51□□□□□ -0.41
TRA2B-202ENST00000342294 TNXAQ16473 311 aa12.51□□□□□ -0.41
TRA2B-202ENST00000342294 C15orf32Q32M92 178 aa12.51□□□□□ -0.41
TRA2B-202ENST00000342294 TTC9CQ8N5M4 171 aa12.51□□□□□ -0.41
TRA2B-202ENST00000342294 NKAIN3Q8N8D7 197 aa12.51□□□□□ -0.41
TRA2B-202ENST00000342294 TEX45Q8NA69 505 aa12.51□□□□□ -0.41
TRA2B-202ENST00000342294 UXS1Q8NBZ7 420 aa12.51□□□□□ -0.41
TRA2B-202ENST00000342294 ZNF485Q8NCK3 441 aa12.51□□□□□ -0.41
TRA2B-202ENST00000342294 DERL3Q96Q80 235 aa12.51□□□□□ -0.41
TRA2B-202ENST00000342294 NICN1Q9BSH3 213 aa12.51□□□□□ -0.41
TRA2B-202ENST00000342294 HDHD3Q9BSH5 251 aaPredicted RBP12.51□□□□□ -0.41
TRA2B-202ENST00000342294 TM2D1Q9BX74 207 aa12.51□□□□□ -0.41
TRA2B-202ENST00000342294 EXOSC1Q9Y3B2 195 aaKnown RBP12.51□□□□□ -0.41
TRA2B-202ENST00000342294 KIR2DL5BA0A0G2JN68 375 aa12.5□□□□□ -0.41
TRA2B-202ENST00000342294 KIR2DL5BA0A0G2JPC4 375 aa12.5□□□□□ -0.41
TRA2B-202ENST00000342294 SHOXO15266 292 aa12.5□□□□□ -0.41
TRA2B-202ENST00000342294 UBBP0CG47 229 aa12.5□□□□□ -0.41
TRA2B-202ENST00000342294 SMN1Q16637 294 aaKnown RBP12.5□□□□□ -0.41
TRA2B-202ENST00000342294 C1orf146Q5VVC0 180 aa12.5□□□□□ -0.41
TRA2B-202ENST00000342294 KIR2DL5AQ8N109 375 aa12.5□□□□□ -0.41
TRA2B-202ENST00000342294 ZFP41Q8N8Y5 198 aa12.5□□□□□ -0.41
TRA2B-202ENST00000342294 KIR2DL5BQ8NHK3 375 aa12.5□□□□□ -0.41
TRA2B-202ENST00000342294 Q9N2K0 584 aa12.5□□□□□ -0.41
TRA2B-202ENST00000342294 RDH8Q9NYR8 311 aa12.5□□□□□ -0.41
TRA2B-202ENST00000342294 CLEC2DQ9UHP7 191 aa12.5□□□□□ -0.41
TRA2B-202ENST00000342294 TRAV25A0A0B4J276 109 aa12.49□□□□□ -0.41
TRA2B-202ENST00000342294 MPPED1O15442 326 aa12.49□□□□□ -0.41
TRA2B-202ENST00000342294 OR2J3O76001 311 aa12.49□□□□□ -0.41
TRA2B-202ENST00000342294 UBE2KP61086 200 aa12.49□□□□□ -0.41
TRA2B-202ENST00000342294 TAGLNQ01995 201 aaKnown RBP12.49□□□□□ -0.41
TRA2B-202ENST00000342294 C5orf30Q96GV9 206 aa12.49□□□□□ -0.41
TRA2B-202ENST00000342294 TMEM59Q9BXS4 323 aa12.49□□□□□ -0.41
TRA2B-202ENST00000342294 PLEKHJ1Q9NW61 149 aa12.49□□□□□ -0.41
TRA2B-202ENST00000342294 SDHAF2Q9NX18 166 aa12.49□□□□□ -0.41
TRA2B-202ENST00000342294 AK3Q9UIJ7 227 aa12.49□□□□□ -0.41
TRA2B-202ENST00000342294 MGAT4AQ9UM21 535 aa12.49□□□□□ -0.41
TRA2B-202ENST00000342294 MUC4Q99102 2169 aa12.48□□□□□ -0.41
TRA2B-202ENST00000342294 A0A0A6YYD4 124 aa12.48□□□□□ -0.41
TRA2B-202ENST00000342294 WBP4O75554 376 aaKnown RBP12.48□□□□□ -0.41
TRA2B-202ENST00000342294 C8orf88P0DMB2 117 aa12.48□□□□□ -0.41
TRA2B-202ENST00000342294 MAP2K4P45985 399 aa12.48□□□□□ -0.41
TRA2B-202ENST00000342294 UNC119Q13432 240 aa12.48□□□□□ -0.41
TRA2B-202ENST00000342294 VMA21Q3ZAQ7 101 aa12.48□□□□□ -0.41
TRA2B-202ENST00000342294 BTNL8Q6UX41 500 aa12.48□□□□□ -0.41
TRA2B-202ENST00000342294 IDO2Q6ZQW0 420 aa12.48□□□□□ -0.41
TRA2B-202ENST00000342294 LINC00336Q6ZUF6 198 aa12.48□□□□□ -0.41
TRA2B-202ENST00000342294 CBR4Q8N4T8 237 aa12.48□□□□□ -0.41
TRA2B-202ENST00000342294 OR1L6Q8NGR2 347 aa12.48□□□□□ -0.41
TRA2B-202ENST00000342294 CCDC140Q96MF4 163 aa12.48□□□□□ -0.41
TRA2B-202ENST00000342294 DIMT1Q9UNQ2 313 aaKnown RBP12.48□□□□□ -0.41
TRA2B-202ENST00000342294 QRFPP83859 136 aa12.47□□□□□ -0.41
TRA2B-202ENST00000342294 FAM106AQ4KMX7 169 aa12.47□□□□□ -0.41
TRA2B-202ENST00000342294 C1orf100Q5SVJ3 147 aa12.47□□□□□ -0.41
TRA2B-202ENST00000342294 GLT8D1Q68CQ7 371 aa12.47□□□□□ -0.41
TRA2B-202ENST00000342294 OR2C3Q8N628 320 aa12.47□□□□□ -0.41
TRA2B-202ENST00000342294 STPG3Q8N7X2 389 aa12.47□□□□□ -0.41
TRA2B-202ENST00000342294 SPIN2AQ99865 258 aa12.47□□□□□ -0.41
TRA2B-202ENST00000342294 SPIN2BQ9BPZ2 258 aa12.47□□□□□ -0.41
TRA2B-202ENST00000342294 KCNK15Q9H427 330 aa12.47□□□□□ -0.41
TRA2B-202ENST00000342294 ZNF430Q9H8G1 570 aaPredicted RBP12.47□□□□□ -0.41
TRA2B-202ENST00000342294 LOC100130705A0A1B0GUX0 176 aa12.46□□□□□ -0.41
TRA2B-202ENST00000342294 ZNF320A2RRD8 509 aa12.46□□□□□ -0.41
TRA2B-202ENST00000342294 TMEM14DPA8MWL7 114 aa12.46□□□□□ -0.41
TRA2B-202ENST00000342294 RRASP10301 218 aa12.46□□□□□ -0.41
TRA2B-202ENST00000342294 SRMP19623 302 aa12.46□□□□□ -0.41
TRA2B-202ENST00000342294 ARL3P36405 182 aa12.46□□□□□ -0.41
TRA2B-202ENST00000342294 TCTAP57738 103 aa12.46□□□□□ -0.41
TRA2B-202ENST00000342294 CBX3Q13185 183 aa12.46□□□□□ -0.41
TRA2B-202ENST00000342294 RTL8BQ17RB0 113 aa12.46□□□□□ -0.41
TRA2B-202ENST00000342294 C10orf55Q5SWW7 151 aa12.46□□□□□ -0.41
TRA2B-202ENST00000342294 ACOT12Q8WYK0 555 aa12.46□□□□□ -0.41
TRA2B-202ENST00000342294 KRTAP4-5Q9BYR2 181 aa12.46□□□□□ -0.41
TRA2B-202ENST00000342294 FBXL7Q9UJT9 491 aa12.46□□□□□ -0.41
TRA2B-202ENST00000342294 ZNF257Q9Y2Q1 563 aa12.46□□□□□ -0.41
TRA2B-202ENST00000342294 DNAH6Q9C0G6 4158 aa12.45□□□□□ -0.42
TRA2B-202ENST00000342294 SOCS1O15524 211 aa12.45□□□□□ -0.42
TRA2B-202ENST00000342294 CTRB1P17538 263 aa12.45□□□□□ -0.42
TRA2B-202ENST00000342294 MYL12AP19105 171 aa12.45□□□□□ -0.42
TRA2B-202ENST00000342294 NANOS2P60321 138 aaKnown RBP12.45□□□□□ -0.42
TRA2B-202ENST00000342294 CTRB2Q6GPI1 263 aa12.45□□□□□ -0.42
TRA2B-202ENST00000342294 OR4A47Q6IF82 309 aa12.45□□□□□ -0.42
TRA2B-202ENST00000342294 CLEC19AQ6UXS0 136 aa12.45□□□□□ -0.42
TRA2B-202ENST00000342294 SLC25A42Q86VD7 318 aa12.45□□□□□ -0.42
TRA2B-202ENST00000342294 FBLIM1Q8WUP2 373 aa12.45□□□□□ -0.42
TRA2B-202ENST00000342294 PYDC1Q8WXC3 89 aa12.45□□□□□ -0.42
TRA2B-202ENST00000342294 MARC2Q969Z3 335 aa12.45□□□□□ -0.42
TRA2B-202ENST00000342294 LPAR5Q9H1C0 372 aa12.45□□□□□ -0.42
TRA2B-202ENST00000342294 OR2D2Q9H210 308 aa12.45□□□□□ -0.42
TRA2B-202ENST00000342294 C12orf4Q9NQ89 552 aa12.45□□□□□ -0.42
TRA2B-202ENST00000342294 FOXI3A8MTJ6 420 aaPredicted RBP12.44□□□□□ -0.42
TRA2B-202ENST00000342294 TRDCB7Z8K6 153 aa12.44□□□□□ -0.42
TRA2B-202ENST00000342294 IGHV3-23P01764 117 aa12.44□□□□□ -0.42
TRA2B-202ENST00000342294 CD37P11049 281 aa12.44□□□□□ -0.42
TRA2B-202ENST00000342294 KLK9Q2XQG4 91 aa12.44□□□□□ -0.42
TRA2B-202ENST00000342294 ODF3L2Q3SX64 289 aa12.44□□□□□ -0.42
TRA2B-202ENST00000342294 RBPMS2Q6ZRY4 209 aaKnown RBP12.44□□□□□ -0.42
TRA2B-202ENST00000342294 C19orf35Q6ZS72 473 aa12.44□□□□□ -0.42
TRA2B-202ENST00000342294 CEACAM19Q7Z692 300 aa12.44□□□□□ -0.42
TRA2B-202ENST00000342294 LRRTM1Q86UE6 522 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms