RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 OR10A2Q9H208 303 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 GNB4Q9HAV0 340 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 COL27A1Q8IZC6 1860 aaPredicted RBP10.03□□□□□ -0.8
RTN3-203ENST00000341307 LIPT2A6NK58 231 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 OTX1P32242 354 aaPredicted RBP10.03□□□□□ -0.8
RTN3-203ENST00000341307 OTX2P32243 289 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 FOLR3P41439 243 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 SMAGPQ0VAQ4 97 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 IGFBP7Q16270 282 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 KLHL24Q6TFL4 600 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 OR5AS1Q8N127 324 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 SFRP2Q96HF1 295 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 HDHD3Q9BSH5 251 aaPredicted RBP10.03□□□□□ -0.8
RTN3-203ENST00000341307 GTSF1LQ9H1H1 148 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 POLR1DQ9Y2S0 133 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 WASHC3Q9Y3C0 194 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 CACNA1AO00555 2505 aa10.03□□□□□ -0.8
RTN3-203ENST00000341307 A0A1W2PS18 150 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 C1QTNF9BB2RNN3 333 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 NPIPA5E9PKD4 350 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 PHF1O43189 567 aaPredicted RBP10.02□□□□□ -0.8
RTN3-203ENST00000341307 MT-CO2P00403 227 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 NRASP01111 189 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 KRASP01116 189 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 FTH1P19P0C7X4 201 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 PMCHP20382 165 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 PAX9P55771 341 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 SUMO3P55854 103 aaPredicted RBP10.02□□□□□ -0.8
RTN3-203ENST00000341307 HIST3H3Q16695 136 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 DCAF12Q5T6F0 453 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 SHISA2Q6UWI4 295 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 WDR82Q6UXN9 313 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 FAM57BQ71RH2 274 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 NEGR1Q7Z3B1 354 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 OR4F5Q8NH21 305 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 RCHY1Q96PM5 261 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 NPIPA1Q9UND3 350 aa10.02□□□□□ -0.8
RTN3-203ENST00000341307 SDK2Q58EX2 2172 aa10.02□□□□□ -0.81
RTN3-203ENST00000341307 TTRP02766 147 aa10.02□□□□□ -0.81
RTN3-203ENST00000341307 C1QTNF9P0C862 333 aa10.02□□□□□ -0.81
RTN3-203ENST00000341307 NPPCP23582 126 aa10.02□□□□□ -0.81
RTN3-203ENST00000341307 LINC00346Q8IVM7 164 aa10.02□□□□□ -0.81
RTN3-203ENST00000341307 OR51T1Q8NGJ9 327 aa10.02□□□□□ -0.81
RTN3-203ENST00000341307 TRAV9-2A0A087WT02 112 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 SAA2-SAA4A0A096LPE2 208 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 NXPH3O95157 252 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 NUDT3O95989 172 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 CA2P00918 260 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 IGHMP01871 453 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 FRMD6-AS1P0C7T7 363 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 BLVRBP30043 206 aaPredicted RBP10.01□□□□□ -0.81
RTN3-203ENST00000341307 OPRM1P35372 400 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 NPBWR2P48146 333 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 FXYD4P59646 89 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 PHYHD1Q5SRE7 291 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 STUMQ69YW2 141 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 OR5D14Q8NGL3 314 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 OR4P4Q8NGL7 312 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 OR5P3Q8WZ94 311 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 LHX4Q969G2 390 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 ZNF479Q96JC4 524 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 KCNS1Q96KK3 526 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 OR51B2Q9Y5P1 312 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 A0A1W2PNU3 283 aaPredicted RBP10.01□□□□□ -0.81
RTN3-203ENST00000341307 IFNA5P01569 189 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 ZNF20P17024 532 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 TMEM267Q0VDI3 215 aaPredicted RBP10.01□□□□□ -0.81
RTN3-203ENST00000341307 Q0VFX4 171 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 PROK2Q9HC23 129 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 NPVFQ9HCQ7 196 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 ANXA10Q9UJ72 324 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 SELENOKQ9Y6D0 94 aa10.01□□□□□ -0.81
RTN3-203ENST00000341307 DSPP15924 2871 aaKnown RBP10□□□□□ -0.81
RTN3-203ENST00000341307 IGLV3-32A0A0A0MS00 114 aa10□□□□□ -0.81
RTN3-203ENST00000341307 TRAPPC2LH3BP13 241 aa10□□□□□ -0.81
RTN3-203ENST00000341307 CHST1O43916 411 aa10□□□□□ -0.81
RTN3-203ENST00000341307 S1PR2O95136 353 aa10□□□□□ -0.81
RTN3-203ENST00000341307 HAND1O96004 215 aa10□□□□□ -0.81
RTN3-203ENST00000341307 REG1AP05451 166 aa10□□□□□ -0.81
RTN3-203ENST00000341307 GATA2P23769 480 aaPredicted RBP10□□□□□ -0.81
RTN3-203ENST00000341307 S100GP29377 79 aa10□□□□□ -0.81
RTN3-203ENST00000341307 PSMB3P49720 205 aa10□□□□□ -0.81
RTN3-203ENST00000341307 CKS1BP61024 79 aa10□□□□□ -0.81
RTN3-203ENST00000341307 C5orf64Q2M2E5 130 aa10□□□□□ -0.81
RTN3-203ENST00000341307 CARD17Q5XLA6 110 aa10□□□□□ -0.81
RTN3-203ENST00000341307 PPP1R32Q7Z5V6 425 aa10□□□□□ -0.81
RTN3-203ENST00000341307 RPS19BP1Q86WX3 136 aaKnown RBP10□□□□□ -0.81
RTN3-203ENST00000341307 CT55Q8WUE5 264 aa10□□□□□ -0.81
RTN3-203ENST00000341307 KCNK17Q96T54 332 aa10□□□□□ -0.81
RTN3-203ENST00000341307 CLEC7AQ9BXN2 247 aa10□□□□□ -0.81
RTN3-203ENST00000341307 ALKBH4Q9NXW9 302 aa10□□□□□ -0.81
RTN3-203ENST00000341307 PCSK5Q92824 1860 aa10□□□□□ -0.81
RTN3-203ENST00000341307 C17orf112F2Z3M2 114 aa10□□□□□ -0.81
RTN3-203ENST00000341307 H0YJW9 148 aa10□□□□□ -0.81
RTN3-203ENST00000341307 IGKV1D-33P01593 117 aa10□□□□□ -0.81
RTN3-203ENST00000341307 IGKV1-33P01594 117 aa10□□□□□ -0.81
RTN3-203ENST00000341307 SSR4P51571 173 aa10□□□□□ -0.81
RTN3-203ENST00000341307 FOXC1Q12948 553 aa10□□□□□ -0.81
RTN3-203ENST00000341307 PMCHL1Q16048 86 aa10□□□□□ -0.81
RTN3-203ENST00000341307 FADS6Q8N9I5 356 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms