RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 FBP1P09467 338 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 TNFRSF1AP19438 455 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 SERF2P84101 59 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 CLDND2Q8NHS1 167 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 RND1Q92730 232 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 S1PR3Q99500 378 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 DSCAMO60469 2012 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 C7orf77A4D0Y5 90 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 H7C2Y5 167 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 M0R036 132 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 ITGB1BP1O14713 200 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 TMPRSS2O15393 492 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 MMP23AO75900 390 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 HBE1P02100 147 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 ICAM4Q14773 271 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 SOHLH1Q5JUK2 328 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 SSX7Q7RTT5 188 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 DDB2Q92466 427 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 RBMXL1Q96E39 390 aaKnown RBP13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 CIB3Q96Q77 187 aaPredicted RBP13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 GAB2Q9UQC2 676 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 PRELID3BQ9Y3B1 194 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 CUL9Q8IWT3 2517 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 RBFOX2O43251 390 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 PLA2G5P39877 138 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 RAB7AP51149 207 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 RAB2AP61019 212 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 LCN15Q6UWW0 184 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 OR10P1Q8NGE3 313 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 CLCC1Q96S66 551 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 DIRC2Q96SL1 478 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 SMCO4Q9NRQ5 59 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 SAA2-SAA4A0A096LPE2 208 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 COLCA2A8K830 154 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 SCAF4O95104 1147 aaKnown RBP13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 IFNA17P01571 189 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 SRP19P09132 144 aaKnown RBP13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 SAA2P0DJI9 122 aaPredicted RBP13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 DAOP14920 347 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 ELLP55199 621 aaPredicted RBP13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 AARDQ4LEZ3 155 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 ZNF506Q5JVG8 444 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 PRAMEF5Q5TYX0 476 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 RXFP4Q8TDU9 374 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 ZNF251Q9BRH9 671 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 RAB9BQ9NP90 201 aa13.11□□□□□ -0.31
CCDC144A-202ENST00000340621 TLN1Q9Y490 2541 aaKnown RBP13.1□□□□□ -0.31
CCDC144A-202ENST00000340621 PCNX1Q96RV3 2341 aa13.1□□□□□ -0.31
CCDC144A-202ENST00000340621 TRAV3A0A0B4J244 114 aa13.1□□□□□ -0.31
CCDC144A-202ENST00000340621 ERVFRD-1P60508 538 aa13.1□□□□□ -0.31
CCDC144A-202ENST00000340621 TLE1Q04724 770 aa13.1□□□□□ -0.31
CCDC144A-202ENST00000340621 RBPJQ06330 500 aa13.1□□□□□ -0.31
CCDC144A-202ENST00000340621 ATP6V1FQ16864 119 aa13.1□□□□□ -0.31
CCDC144A-202ENST00000340621 ZNF439Q8NDP4 499 aa13.1□□□□□ -0.31
CCDC144A-202ENST00000340621 OR4A16Q8NH70 328 aa13.1□□□□□ -0.31
CCDC144A-202ENST00000340621 MBD3L1Q8WWY6 194 aa13.1□□□□□ -0.31
CCDC144A-202ENST00000340621 CORO2AQ92828 525 aa13.1□□□□□ -0.31
CCDC144A-202ENST00000340621 RCC1LQ96I51 464 aaKnown RBP13.1□□□□□ -0.31
CCDC144A-202ENST00000340621 LINC00574Q9H8X3 128 aa13.1□□□□□ -0.31
CCDC144A-202ENST00000340621 IDI2-AS1Q9NZ38 188 aa13.1□□□□□ -0.31
CCDC144A-202ENST00000340621 ROS1P08922 2347 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 NDUFB7P17568 137 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 CEBPGP53567 150 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 FGF8P55075 233 aaPredicted RBP13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 TMEM41BQ5BJD5 291 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 CENPVQ7Z7K6 275 aaPredicted RBP13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 LYG1Q8N1E2 194 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 KDF1Q8NAX2 398 aaPredicted RBP13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 PINX1Q96BK5 328 aaKnown RBP13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 TMEM147Q9BVK8 224 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 GNG13Q9P2W3 67 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 PUS1Q9Y606 427 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 ZNF729A6NN14 1252 aaPredicted RBP13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 FAM90A9PA6NNJ1 464 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 C15orf62A8K5M9 175 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 EIF3GO75821 320 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 HSPB1P04792 205 aaKnown RBP13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 NQO2P16083 231 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 GNG10P50151 68 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 GNB2P62879 340 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 MRPS11P82912 194 aaKnown RBP13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 FAM122CQ6P4D5 195 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 CCL17Q92583 94 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 NEUROG1Q92886 237 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 VKORC1Q9BQB6 163 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 SAP30LQ9HAJ7 183 aa13.09□□□□□ -0.31
CCDC144A-202ENST00000340621 TRGV8A0A0C4DH27 118 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 SHISA9B4DS77 424 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 IGKV1D-33P01593 117 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 IGKV1-33P01594 117 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 ERVK-16P61578 105 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 RELBQ01201 579 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 ZNF787Q6DD87 383 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 SSX8Q7RTT4 187 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 RPP25LQ8N5L8 163 aaKnown RBP13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 CYB561D1Q8N8Q1 229 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 ZNF383Q8NA42 475 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 TMEM140Q9NV12 185 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 PTPRQQ9UMZ3 2332 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 ZZEF1O43149 2961 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms