RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ZNF491Q8N8L2 437 aa11.38□□□□□ -0.59
ERCC1-203ENST00000340192 UBE2E2Q96LR5 201 aa11.38□□□□□ -0.59
ERCC1-203ENST00000340192 FOXA2Q9Y261 457 aaPredicted RBP11.38□□□□□ -0.59
ERCC1-203ENST00000340192 MEIS3P1A6NDR6 274 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 SRRM4A7MD48 611 aaKnown RBP11.37□□□□□ -0.59
ERCC1-203ENST00000340192 ARPC1BO15143 372 aaKnown RBP11.37□□□□□ -0.59
ERCC1-203ENST00000340192 TUSC2O75896 110 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 SLC22A5O76082 557 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 CRYZL1O95825 349 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 IGLV2-14P01704 120 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 FCER2P06734 321 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 CRYGBP07316 175 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 GNB1P62873 340 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 FXYD3Q14802 87 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 AKIRIN2Q53H80 203 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 ACTBL2Q562R1 376 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 TMEM69Q5SWH9 247 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 UNQ5815/PRO19632Q6UWF5 114 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 TCTEX1D1Q8N7M0 179 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 LFNGQ8NES3 379 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 GRPEL2Q8TAA5 225 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 CASTOR1Q8WTX7 329 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 ARPC1AQ92747 370 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 KCTD12Q96CX2 325 aaKnown RBP11.37□□□□□ -0.59
ERCC1-203ENST00000340192 GNB4Q9HAV0 340 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 AURKAIP1Q9NWT8 199 aaPredicted RBP11.37□□□□□ -0.59
ERCC1-203ENST00000340192 VSIG4Q9Y279 399 aa11.37□□□□□ -0.59
ERCC1-203ENST00000340192 RBMX2Q9Y388 322 aaKnown RBP11.37□□□□□ -0.59
ERCC1-203ENST00000340192 I3L521 148 aa11.36□□□□□ -0.59
ERCC1-203ENST00000340192 CNIH1O95406 144 aa11.36□□□□□ -0.59
ERCC1-203ENST00000340192 FCGR2CP31995 323 aa11.36□□□□□ -0.59
ERCC1-203ENST00000340192 CBX5P45973 191 aa11.36□□□□□ -0.59
ERCC1-203ENST00000340192 SSBP2P81877 361 aaPredicted RBP11.36□□□□□ -0.59
ERCC1-203ENST00000340192 KCTD9Q7L273 389 aa11.36□□□□□ -0.59
ERCC1-203ENST00000340192 SNAPC3Q92966 411 aa11.36□□□□□ -0.59
ERCC1-203ENST00000340192 OR5B12Q96R08 314 aa11.36□□□□□ -0.59
ERCC1-203ENST00000340192 MCRIP2Q9BUT9 160 aaKnown RBP11.36□□□□□ -0.59
ERCC1-203ENST00000340192 FCGR3BO75015 233 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 EIF4EP06730 217 aaKnown RBP11.35□□□□□ -0.59
ERCC1-203ENST00000340192 AADACP22760 399 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 HOXD3P31249 432 aaPredicted RBP11.35□□□□□ -0.59
ERCC1-203ENST00000340192 TAS2R20P59543 309 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 KRTAP10-11P60412 298 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 UBE2KP61086 200 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 RPL30P62888 115 aaKnown RBP11.35□□□□□ -0.59
ERCC1-203ENST00000340192 RUNX1Q01196 453 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 FHL3Q13643 280 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 VMA21Q3ZAQ7 101 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 PYHIN1Q6K0P9 492 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 OVCH2Q7RTZ1 564 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 OR11H1Q8NG94 326 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 OR5M8Q8NGP6 311 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 OSR1Q8TAX0 266 aaPredicted RBP11.35□□□□□ -0.59
ERCC1-203ENST00000340192 GPR61Q9BZJ8 451 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 NAA50Q9GZZ1 169 aaKnown RBP11.35□□□□□ -0.59
ERCC1-203ENST00000340192 IFT46Q9NQC8 304 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 COMMD3Q9UBI1 195 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 PRELID3BQ9Y3B1 194 aa11.35□□□□□ -0.59
ERCC1-203ENST00000340192 PPYP01298 95 aa11.34□□□□□ -0.59
ERCC1-203ENST00000340192 EGFEM1PQ0D2K5 195 aa11.34□□□□□ -0.59
ERCC1-203ENST00000340192 EIF4EBP1Q13541 118 aaPredicted RBP11.34□□□□□ -0.59
ERCC1-203ENST00000340192 CTF1Q16619 201 aa11.34□□□□□ -0.59
ERCC1-203ENST00000340192 MRGPRG-AS1Q2M3A8 158 aa11.34□□□□□ -0.59
ERCC1-203ENST00000340192 OR2B11Q5JQS5 317 aa11.34□□□□□ -0.59
ERCC1-203ENST00000340192 IDO2Q6ZQW0 420 aa11.34□□□□□ -0.59
ERCC1-203ENST00000340192 ANKRD13BQ86YJ7 626 aa11.34□□□□□ -0.59
ERCC1-203ENST00000340192 TEX45Q8NA69 505 aa11.34□□□□□ -0.59
ERCC1-203ENST00000340192 OR5AP2Q8NGF4 316 aa11.34□□□□□ -0.59
ERCC1-203ENST00000340192 OR1N2Q8NGR9 330 aa11.34□□□□□ -0.59
ERCC1-203ENST00000340192 MRAPQ8TCY5 172 aa11.34□□□□□ -0.59
ERCC1-203ENST00000340192 SECTM1Q8WVN6 248 aa11.34□□□□□ -0.59
ERCC1-203ENST00000340192 MS4A10Q96PG2 267 aa11.34□□□□□ -0.59
ERCC1-203ENST00000340192 HSD17B10Q99714 261 aaKnown RBP11.34□□□□□ -0.59
ERCC1-203ENST00000340192 DCUN1D5Q9BTE7 237 aa11.34□□□□□ -0.59
ERCC1-203ENST00000340192 ALX4Q9H161 411 aaPredicted RBP11.34□□□□□ -0.59
ERCC1-203ENST00000340192 MRPS7Q9Y2R9 242 aaKnown RBP11.34□□□□□ -0.59
ERCC1-203ENST00000340192 GABARAPO95166 117 aa11.33□□□□□ -0.6
ERCC1-203ENST00000340192 CD40LGP29965 261 aa11.33□□□□□ -0.6
ERCC1-203ENST00000340192 RORCP51449 518 aa11.33□□□□□ -0.6
ERCC1-203ENST00000340192 ZNF616Q08AN1 781 aa11.33□□□□□ -0.6
ERCC1-203ENST00000340192 CDK10Q15131 360 aa11.33□□□□□ -0.6
ERCC1-203ENST00000340192 PRSS8Q16651 343 aa11.33□□□□□ -0.6
ERCC1-203ENST00000340192 GPR107Q5VW38 600 aa11.33□□□□□ -0.6
ERCC1-203ENST00000340192 TCTEX1D2Q8WW35 142 aa11.33□□□□□ -0.6
ERCC1-203ENST00000340192 DPF1Q92782 380 aa11.33□□□□□ -0.6
ERCC1-203ENST00000340192 GPHA2Q96T91 129 aa11.33□□□□□ -0.6
ERCC1-203ENST00000340192 MRPS26Q9BYN8 205 aaKnown RBP11.33□□□□□ -0.6
ERCC1-203ENST00000340192 CCL28Q9NRJ3 127 aa11.33□□□□□ -0.6
ERCC1-203ENST00000340192 TAS2R8Q9NYW2 309 aa11.33□□□□□ -0.6
ERCC1-203ENST00000340192 TNFSF12O43508 249 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 APOA1P02647 267 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 LGALS1P09382 135 aaKnown RBP11.32□□□□□ -0.6
ERCC1-203ENST00000340192 OR8U8P0C7N1 319 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 SAA1P0DJI8 122 aaPredicted RBP11.32□□□□□ -0.6
ERCC1-203ENST00000340192 PRSS3P35030 304 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 BRWD1-AS2P59051 145 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 TPPP2P59282 170 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 FXYD4P59646 89 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 ASPHD1Q5U4P2 390 aa11.32□□□□□ -0.6
ERCC1-203ENST00000340192 ZNF66Q6ZN08 573 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms