RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 KCNAB3O43448 404 aa11.94□□□□□ -0.5
CBX3-201ENST00000337620 CRYZL1O95825 349 aa11.94□□□□□ -0.5
CBX3-201ENST00000337620 RLN2P04090 185 aa11.94□□□□□ -0.5
CBX3-201ENST00000337620 ARG1P05089 322 aa11.94□□□□□ -0.5
CBX3-201ENST00000337620 PET100P0DJ07 73 aa11.94□□□□□ -0.5
CBX3-201ENST00000337620 AP2S1P53680 142 aaPredicted RBP11.94□□□□□ -0.5
CBX3-201ENST00000337620 SMCO1Q147U7 214 aa11.94□□□□□ -0.5
CBX3-201ENST00000337620 SSX9Q7RTT3 188 aa11.94□□□□□ -0.5
CBX3-201ENST00000337620 DCUN1D4Q92564 292 aa11.94□□□□□ -0.5
CBX3-201ENST00000337620 R3HDM4Q96D70 268 aa11.94□□□□□ -0.5
CBX3-201ENST00000337620 SLC35D1Q9NTN3 355 aa11.94□□□□□ -0.5
CBX3-201ENST00000337620 MMP24Q9Y5R2 645 aa11.94□□□□□ -0.5
CBX3-201ENST00000337620 WNK2Q9Y3S1 2297 aa11.94□□□□□ -0.5
CBX3-201ENST00000337620 MARCH11A6NNE9 402 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 TOX4O94842 621 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 SLC25A16P16260 332 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 CXCL2P19875 107 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 NKX2-1P43699 371 aaPredicted RBP11.93□□□□□ -0.5
CBX3-201ENST00000337620 ZNF137PP52743 207 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 DVL1P1P54792 670 aaPredicted RBP11.93□□□□□ -0.5
CBX3-201ENST00000337620 CXorf66Q5JRM2 361 aaPredicted RBP11.93□□□□□ -0.5
CBX3-201ENST00000337620 FAM71F2Q6NXP2 309 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 PRSS54Q6PEW0 395 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 H2BFWTQ7Z2G1 175 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 DMBX1Q8NFW5 382 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 OR4P4Q8NGL7 312 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 MFFQ9GZY8 342 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 A0A1W2PRD5 423 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 A0A1W2PRF3 423 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 A0A1W2PRM7 423 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 H7C2Y5 167 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 K7EPK0 472 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 L7N2F9 121 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 ST8SIA3O43173 380 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 APOA2P02652 100 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 SLC25A6P12236 298 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 USF1P22415 310 aaPredicted RBP11.93□□□□□ -0.5
CBX3-201ENST00000337620 RTL8BQ17RB0 113 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 TMEM65Q6PI78 240 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 VKORC1L1Q8N0U8 176 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 FAM71E2Q8N5Q1 922 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 OR11H6Q8NGC7 330 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 NABP2Q9BQ15 211 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 SIRPDQ9H106 197 aa11.93□□□□□ -0.5
CBX3-201ENST00000337620 AMMECR1Q9Y4X0 333 aaPredicted RBP11.93□□□□□ -0.5
CBX3-201ENST00000337620 TSC22D2O75157 780 aa11.92□□□□□ -0.5
CBX3-201ENST00000337620 NQO2P16083 231 aa11.92□□□□□ -0.5
CBX3-201ENST00000337620 ERVK-16P61578 105 aa11.92□□□□□ -0.5
CBX3-201ENST00000337620 HCP5Q6MZN7 132 aa11.92□□□□□ -0.5
CBX3-201ENST00000337620 INO80EQ8NBZ0 244 aaPredicted RBP11.92□□□□□ -0.5
CBX3-201ENST00000337620 MAGT1Q9H0U3 335 aa11.92□□□□□ -0.5
CBX3-201ENST00000337620 ZFP57Q9NU63 452 aa11.92□□□□□ -0.5
CBX3-201ENST00000337620 TNFSF18Q9UNG2 199 aa11.92□□□□□ -0.5
CBX3-201ENST00000337620 POLR3KQ9Y2Y1 108 aaPredicted RBP11.92□□□□□ -0.5
CBX3-201ENST00000337620 NAV2Q8IVL1 2488 aa11.92□□□□□ -0.5
CBX3-201ENST00000337620 H0YJW9 148 aa11.92□□□□□ -0.5
CBX3-201ENST00000337620 DEDDO75618 318 aa11.92□□□□□ -0.5
CBX3-201ENST00000337620 IGKV1-16P04430 117 aa11.92□□□□□ -0.5
CBX3-201ENST00000337620 POLR2GP62487 172 aaKnown RBP eCLIP11.92□□□□□ -0.5
CBX3-201ENST00000337620 LRRC75A-AS1Q8N1F1 130 aa11.92□□□□□ -0.5
CBX3-201ENST00000337620 RPEQ96AT9 228 aa11.92□□□□□ -0.5
CBX3-201ENST00000337620 UNKLQ9H9P5 680 aaKnown RBP11.92□□□□□ -0.5
CBX3-201ENST00000337620 POMT1Q9Y6A1 747 aa11.92□□□□□ -0.5
CBX3-201ENST00000337620 RNASEK-C17orf49H0YIS7 233 aa11.91□□□□□ -0.5
CBX3-201ENST00000337620 PITX3O75364 302 aa11.91□□□□□ -0.5
CBX3-201ENST00000337620 RBMXL2O75526 392 aaKnown RBP11.91□□□□□ -0.5
CBX3-201ENST00000337620 GAPDHP04406 335 aaKnown RBP11.91□□□□□ -0.5
CBX3-201ENST00000337620 P0C879 139 aa11.91□□□□□ -0.5
CBX3-201ENST00000337620 MMP9P14780 707 aa11.91□□□□□ -0.5
CBX3-201ENST00000337620 HOXB4P17483 251 aaPredicted RBP11.91□□□□□ -0.5
CBX3-201ENST00000337620 HTR1DP28221 377 aa11.91□□□□□ -0.5
CBX3-201ENST00000337620 OR5AN1Q8NGI8 311 aa11.91□□□□□ -0.5
CBX3-201ENST00000337620 RCL1Q9Y2P8 373 aaKnown RBP11.91□□□□□ -0.5
CBX3-201ENST00000337620 INSIG2Q9Y5U4 225 aa11.91□□□□□ -0.5
CBX3-201ENST00000337620 SVEP1Q4LDE5 3571 aa11.91□□□□□ -0.5
CBX3-201ENST00000337620 RRASP10301 218 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 LYL1P12980 280 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 TAGLNQ01995 201 aaKnown RBP11.9□□□□□ -0.5
CBX3-201ENST00000337620 ID3Q02535 119 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 LHX4Q969G2 390 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 NSG2Q9Y328 171 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 IGHV3-72A0A0B4J1Y9 119 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 LEUTXA8MZ59 168 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 WRBO00258 174 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 SSSCA1O60232 199 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 SNAPC5O75971 98 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 HRASP01112 189 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 NUP62P37198 522 aaPredicted RBP11.9□□□□□ -0.5
CBX3-201ENST00000337620 Q5PR19 223 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 DHRS7BQ6IAN0 325 aaPredicted RBP11.9□□□□□ -0.5
CBX3-201ENST00000337620 ACOT7LQ6ZUV0 252 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 TMUB2Q71RG4 321 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 MOB3BQ86TA1 216 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 RHOVQ96L33 236 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 TBX15Q96SF7 602 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 ARL6Q9H0F7 186 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.9□□□□□ -0.5
CBX3-201ENST00000337620 DPM3Q9P2X0 92 aa11.9□□□□□ -0.5
CBX3-201ENST00000337620 ABCA2Q9BZC7 2435 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 IGHV1-3A0A0C4DH29 117 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms