RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 FBLN7Q53RD9 439 aa12.26□□□□□ -0.45
SEC13-201ENST00000337354 TMEM177Q53S58 311 aa12.26□□□□□ -0.45
SEC13-201ENST00000337354 TCTEX1D1Q8N7M0 179 aa12.26□□□□□ -0.45
SEC13-201ENST00000337354 OSR1Q8TAX0 266 aaPredicted RBP12.26□□□□□ -0.45
SEC13-201ENST00000337354 TSNAXQ99598 290 aaKnown RBP12.26□□□□□ -0.45
SEC13-201ENST00000337354 PRSS22Q9GZN4 317 aa12.26□□□□□ -0.45
SEC13-201ENST00000337354 PLSCR3Q9NRY6 295 aa12.26□□□□□ -0.45
SEC13-201ENST00000337354 A0A1B0GUS0 222 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 RBFOX2O43251 390 aaKnown RBP eCLIP12.25□□□□□ -0.45
SEC13-201ENST00000337354 CTSDP07339 412 aaPredicted RBP12.25□□□□□ -0.45
SEC13-201ENST00000337354 RND3P61587 244 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 FOXL1Q12952 345 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 MMDQ15546 238 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 ABCA11PQ4W5N1 156 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 C5orf56Q8N8D9 126 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 OR13C8Q8NGS7 320 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 OR4F5Q8NH21 305 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 MARCH1Q8TCQ1 289 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 RITA1Q96K30 269 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 RASL11BQ9BPW5 248 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 SLC25A21Q9BQT8 299 aaPredicted RBP12.25□□□□□ -0.45
SEC13-201ENST00000337354 AIFM2Q9BRQ8 373 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 C16orf95Q9H693 158 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 LIN7CQ9NUP9 197 aaKnown RBP12.25□□□□□ -0.45
SEC13-201ENST00000337354 KIAA1456Q9P272 454 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 GPR132Q9UNW8 380 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 COL6A5A8TX70 2615 aa12.25□□□□□ -0.45
SEC13-201ENST00000337354 TMEM89A2RUT3 159 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 NBR2O15453 112 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 FCGR3BO75015 233 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 NDUFA3O95167 84 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 SPDEFO95238 335 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 AMY1AP04745 511 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 F2RL1P55085 397 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 BLCAPP62952 87 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 Q6ZSV7 163 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 Q8N2B8 174 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 Q8N9W7 124 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 CCDC71LQ8N9Z2 235 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 OR4S2Q8NH73 311 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 MRGPRFQ96AM1 343 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 SLC2A9Q9NRM0 540 aa12.24□□□□□ -0.45
SEC13-201ENST00000337354 FAM212BQ9NTI7 297 aaPredicted RBP12.24□□□□□ -0.45
SEC13-201ENST00000337354 C14orf166Q9Y224 244 aaKnown RBP12.24□□□□□ -0.45
SEC13-201ENST00000337354 SHOXO15266 292 aa12.23□□□□□ -0.45
SEC13-201ENST00000337354 MPPED1O15442 326 aa12.23□□□□□ -0.45
SEC13-201ENST00000337354 B3GALNT1O75752 331 aa12.23□□□□□ -0.45
SEC13-201ENST00000337354 CRYZL1O95825 349 aa12.23□□□□□ -0.45
SEC13-201ENST00000337354 RLN1P04808 185 aa12.23□□□□□ -0.45
SEC13-201ENST00000337354 F2RP25116 425 aa12.23□□□□□ -0.45
SEC13-201ENST00000337354 RAG2P55895 527 aa12.23□□□□□ -0.45
SEC13-201ENST00000337354 PIGPP57054 158 aa12.23□□□□□ -0.45
SEC13-201ENST00000337354 RELBQ01201 579 aa12.23□□□□□ -0.45
SEC13-201ENST00000337354 PHLDA2Q53GA4 152 aa12.23□□□□□ -0.45
SEC13-201ENST00000337354 SPAG16Q8N0X2 631 aa12.23□□□□□ -0.45
SEC13-201ENST00000337354 FAM71E2Q8N5Q1 922 aa12.23□□□□□ -0.45
SEC13-201ENST00000337354 BEX1Q9HBH7 125 aa12.23□□□□□ -0.45
SEC13-201ENST00000337354 COPZ2Q9P299 210 aa12.23□□□□□ -0.45
SEC13-201ENST00000337354 RRHO14718 337 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 UPK1BO75841 260 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 HPRT1P00492 218 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 BRWD1-AS2P59051 145 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 PSG5Q15238 335 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 LIN54Q6MZP7 749 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 TBC1D26Q86UD7 250 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 OR51H1Q8NH63 302 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 OR2T6Q8NHC8 308 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 SPATA3Q8NHX4 192 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 HARBI1Q96MB7 349 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 GPHA2Q96T91 129 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 RTBDNQ9BSG5 229 aaPredicted RBP12.22□□□□□ -0.45
SEC13-201ENST00000337354 C5orf66Q9H5L9 145 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 PLEKHA2Q9HB19 425 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 MMP24Q9Y5R2 645 aa12.22□□□□□ -0.45
SEC13-201ENST00000337354 LINC00854A0A1B0GVQ3 168 aa12.21□□□□□ -0.45
SEC13-201ENST00000337354 PLA2G10O15496 165 aa12.21□□□□□ -0.45
SEC13-201ENST00000337354 HRASP01112 189 aa12.21□□□□□ -0.45
SEC13-201ENST00000337354 PI3P19957 117 aa12.21□□□□□ -0.45
SEC13-201ENST00000337354 RBMS2Q15434 407 aaKnown RBP12.21□□□□□ -0.45
SEC13-201ENST00000337354 C5orf64Q2M2E5 130 aa12.21□□□□□ -0.45
SEC13-201ENST00000337354 OR2B11Q5JQS5 317 aa12.21□□□□□ -0.45
SEC13-201ENST00000337354 TEX45Q8NA69 505 aa12.21□□□□□ -0.45
SEC13-201ENST00000337354 ZNF702PQ9H963 129 aa12.21□□□□□ -0.45
SEC13-201ENST00000337354 CLPSL1A2RUU4 121 aa12.2□□□□□ -0.46
SEC13-201ENST00000337354 SRRM4A7MD48 611 aaKnown RBP12.2□□□□□ -0.46
SEC13-201ENST00000337354 LYRM1O43325 122 aa12.2□□□□□ -0.46
SEC13-201ENST00000337354 RAMP3O60896 148 aa12.2□□□□□ -0.46
SEC13-201ENST00000337354 PEX14O75381 377 aa12.2□□□□□ -0.46
SEC13-201ENST00000337354 IGLV2-23P01705 113 aa12.2□□□□□ -0.46
SEC13-201ENST00000337354 CNTFRP26992 372 aa12.2□□□□□ -0.46
SEC13-201ENST00000337354 COMPP49747 757 aaPredicted RBP12.2□□□□□ -0.46
SEC13-201ENST00000337354 TAS2R31P59538 309 aa12.2□□□□□ -0.46
SEC13-201ENST00000337354 UBE2KP61086 200 aa12.2□□□□□ -0.46
SEC13-201ENST00000337354 PLGLAQ15195 96 aa12.2□□□□□ -0.46
SEC13-201ENST00000337354 VMA21Q3ZAQ7 101 aa12.2□□□□□ -0.46
SEC13-201ENST00000337354 LINC01006Q8NI28 216 aa12.2□□□□□ -0.46
SEC13-201ENST00000337354 VSTM2AQ8TAG5 236 aa12.2□□□□□ -0.46
SEC13-201ENST00000337354 RBMXL1Q96E39 390 aaKnown RBP12.2□□□□□ -0.46
SEC13-201ENST00000337354 METTL1Q9UBP6 276 aaKnown RBP12.2□□□□□ -0.46
SEC13-201ENST00000337354 C3orf85A0A1B0GTC6 90 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms