RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 SEC11BP0C7V7 166 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 ZNF645Q8N7E2 425 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 GALNT14Q96FL9 552 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 ZNRD1Q9P1U0 126 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 DLX1P56177 255 aa13.46□□□□□ -0.25
SYNM-201ENST00000328642 NRN1LQ496H8 165 aa13.46□□□□□ -0.25
SYNM-201ENST00000328642 RPRMQ9NS64 109 aa13.46□□□□□ -0.25
SYNM-201ENST00000328642 INSIG2Q9Y5U4 225 aa13.46□□□□□ -0.25
SYNM-201ENST00000328642 NAV2Q8IVL1 2488 aa13.46□□□□□ -0.25
SYNM-201ENST00000328642 CD24P25063 80 aa13.46□□□□□ -0.25
SYNM-201ENST00000328642 RAB7AP51149 207 aa13.46□□□□□ -0.25
SYNM-201ENST00000328642 RPL19P84098 196 aaKnown RBP13.46□□□□□ -0.25
SYNM-201ENST00000328642 HERPUD1Q15011 391 aa13.46□□□□□ -0.25
SYNM-201ENST00000328642 TMEM42Q69YG0 159 aa13.46□□□□□ -0.25
SYNM-201ENST00000328642 UQCC3Q6UW78 93 aa13.46□□□□□ -0.25
SYNM-201ENST00000328642 LINC00596Q86U02 117 aa13.46□□□□□ -0.25
SYNM-201ENST00000328642 FAM216AQ8WUB2 273 aa13.46□□□□□ -0.25
SYNM-201ENST00000328642 TMEM147Q9BVK8 224 aa13.46□□□□□ -0.25
SYNM-201ENST00000328642 EPG5Q9HCE0 2579 aa13.46□□□□□ -0.26
SYNM-201ENST00000328642 HIVEP3Q5T1R4 2406 aa13.46□□□□□ -0.26
SYNM-201ENST00000328642 IQCF6A8MYZ5 107 aa13.46□□□□□ -0.26
SYNM-201ENST00000328642 OR4P4Q8NGL7 312 aa13.46□□□□□ -0.26
SYNM-201ENST00000328642 OR13D1Q8NGV5 346 aa13.46□□□□□ -0.26
SYNM-201ENST00000328642 FAM57AQ8TBR7 257 aa13.46□□□□□ -0.26
SYNM-201ENST00000328642 QTRT1Q9BXR0 403 aaKnown RBP13.46□□□□□ -0.26
SYNM-201ENST00000328642 FAM117AQ9C073 453 aa13.46□□□□□ -0.26
SYNM-201ENST00000328642 HES4Q9HCC6 221 aa13.46□□□□□ -0.26
SYNM-201ENST00000328642 SLC25A17O43808 307 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 TNFRSF9Q07011 255 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 SFXN3Q9BWM7 321 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 LYRM2Q9NU23 88 aaPredicted RBP13.45□□□□□ -0.26
SYNM-201ENST00000328642 POLQO75417 2590 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 A8MXE2 369 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 PRSS44E7EML9 344 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 NPY1RP25929 384 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 MIC13Q5XKP0 118 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 CLCF1Q9UBD9 225 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 ZNF835Q9Y2P0 537 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 IGHV3-35A0A0C4DH35 117 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 RAB29O14966 203 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 CRYBA1P05813 215 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 OR10J4P0C629 311 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 UCP1P25874 307 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 LDLRAD3Q86YD5 345 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 H1FOOQ8IZA3 346 aaPredicted RBP13.45□□□□□ -0.26
SYNM-201ENST00000328642 PFDN5Q99471 154 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 TMEM140Q9NV12 185 aa13.45□□□□□ -0.26
SYNM-201ENST00000328642 IGKV1-6A0A0C4DH72 117 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 H3BQ15 152 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 H3BTX0 84 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 DOLPP1Q86YN1 238 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 FLYWCH2Q96CP2 140 aaKnown RBP13.44□□□□□ -0.26
SYNM-201ENST00000328642 SGK494Q96LW2 274 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 WFDC1Q9HC57 220 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 NIT2Q9NQR4 276 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 A0A0G2JRQ6 117 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 G3V3Q6 166 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 UCP3P55916 312 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 RPL11P62913 178 aaKnown RBP13.44□□□□□ -0.26
SYNM-201ENST00000328642 S4R3C0 116 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 TRBV6-7A0A0A0MS04 114 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 ZNF705FA8MVS1 300 aaPredicted RBP13.44□□□□□ -0.26
SYNM-201ENST00000328642 PPP5D1E7EU14 171 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 K7N7A8 449 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 ZNF705DP0CH99 300 aaPredicted RBP13.44□□□□□ -0.26
SYNM-201ENST00000328642 ZNF705BP0CI00 300 aaPredicted RBP13.44□□□□□ -0.26
SYNM-201ENST00000328642 DLK1P80370 383 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 FOXL2NBQ6ZUU3 175 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 NANPQ8TBE9 248 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 ZNF714Q96N38 554 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 PARP11Q9NR21 331 aa13.44□□□□□ -0.26
SYNM-201ENST00000328642 IGHV3OR16-10A0A075B7F0 116 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 COX7A2P2O60397 106 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 FGF2P09038 288 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 SUB1P53999 127 aaKnown RBP eCLIP13.43□□□□□ -0.26
SYNM-201ENST00000328642 RPL30P62888 115 aaKnown RBP13.43□□□□□ -0.26
SYNM-201ENST00000328642 GAMTQ14353 236 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 VMA21Q3ZAQ7 101 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 NCMAPQ5T1S8 102 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 MUC15Q8N387 334 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 KIAA1456Q9P272 454 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 PAX6P26367 422 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 TMPRSS3P57727 454 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 B2MP61769 119 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 WDR31Q8NA23 367 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 SPSB4Q96A44 273 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 GP6Q9HCN6 339 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 GATA2P23769 480 aaPredicted RBP13.43□□□□□ -0.26
SYNM-201ENST00000328642 TCL1AP56279 114 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 TMEM41BQ5BJD5 291 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 MRGPRGQ86SM5 289 aa13.43□□□□□ -0.26
SYNM-201ENST00000328642 MAP1AP78559 2803 aaPredicted RBP13.43□□□□□ -0.26
SYNM-201ENST00000328642 ZNF320A2RRD8 509 aa13.42□□□□□ -0.26
SYNM-201ENST00000328642 NUDT19A8MXV4 375 aa13.42□□□□□ -0.26
SYNM-201ENST00000328642 HOXB1P14653 301 aaPredicted RBP13.42□□□□□ -0.26
SYNM-201ENST00000328642 RND3P61587 244 aa13.42□□□□□ -0.26
SYNM-201ENST00000328642 CCL20P78556 96 aa13.42□□□□□ -0.26
SYNM-201ENST00000328642 DUX4L9Q6RFH8 374 aaPredicted RBP13.42□□□□□ -0.26
SYNM-201ENST00000328642 SPNS3Q6ZMD2 512 aa13.42□□□□□ -0.26
SYNM-201ENST00000328642 WDR86Q86TI4 376 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms