RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 REC114Q7Z4M0 266 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 VKORC1L1Q8N0U8 176 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 COMMD1Q8N668 190 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 ZNF525Q8N782 197 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 CT45A3Q8NHU0 189 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 SFT2D1Q8WV19 159 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 C17orf50Q8WW18 174 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 NEUROG1Q92886 237 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 R3HDM4Q96D70 268 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 RAB29O14966 203 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 CD55P08174 381 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 NPBWR1P48145 328 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 UCNP55089 124 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 ERVFRD-1P60508 538 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 PEA15Q15121 130 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 C1orf229Q6ZS94 237 aaPredicted RBP6.25□□□□□ -1.41
IFT88-201ENST00000319980 SSX8Q7RTT4 187 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 TCF23Q7RTU1 214 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 DTD1Q8TEA8 209 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 DIRC2Q96SL1 478 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 SCRT1Q9BWW7 348 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 GFOD1Q9NXC2 390 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 DSCAMO60469 2012 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 NCOR2Q9Y618 2525 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 TRBV23-1A0A0A0MS06 115 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 CEBPZOSA8MTT3 80 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 MMP23AO75900 390 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 HPRT1P00492 218 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 GNG10P50151 68 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 CASP6P55212 293 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 OR2B8PP59922 312 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 AKIRIN2Q53H80 203 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 TEX36Q5VZQ5 186 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 TMEM14EPQ6UXP3 125 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 CBLN2Q8IUK8 224 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 LYG1Q8N1E2 194 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 RBMXL1Q96E39 390 aaKnown RBP6.25□□□□□ -1.41
IFT88-201ENST00000319980 OR4C12Q96R67 309 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 S1PR3Q99500 378 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 RARRES2Q99969 163 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 PBDC1Q9BVG4 233 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 EGLN1Q9GZT9 426 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 NCOR1P1Q9H4R4 102 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 PRELID3BQ9Y3B1 194 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 CHD8Q9HCK8 2581 aa6.25□□□□□ -1.41
IFT88-201ENST00000319980 SHISA9B4DS77 424 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 E7EQL1 145 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 IFNA17P01571 189 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 OR9G9P0C7N8 305 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 RAB7AP51149 207 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 SLC38A11Q08AI6 406 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 LFNGQ8NES3 379 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 LINC01560Q8TB33 94 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 RNASE6Q93091 150 aaKnown RBP6.24□□□□□ -1.41
IFT88-201ENST00000319980 RAB9BQ9NP90 201 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 DYNLRB1Q9NP97 96 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 TPRP12270 2363 aaKnown RBP6.24□□□□□ -1.41
IFT88-201ENST00000319980 PPIAL4EA0A075B759 164 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 SAA2-SAA4A0A096LPE2 208 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 TRAV38-1A0A0B4J264 116 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 UBE2L5PA0A1B0GUS4 154 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 FAM90A27PA6NNH2 459 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 PPIAL4DF5H284 164 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 SAA2P0DJI9 122 aaPredicted RBP6.24□□□□□ -1.41
IFT88-201ENST00000319980 PPIAL4FP0DN26 164 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 TLE4Q04727 773 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 LRRC75BQ2VPJ9 315 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 PRAMEF5Q5TYX0 476 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 SPSB3Q6PJ21 355 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 QTRT1Q9BXR0 403 aaKnown RBP6.24□□□□□ -1.41
IFT88-201ENST00000319980 WDR61Q9GZS3 305 aaKnown RBP6.24□□□□□ -1.41
IFT88-201ENST00000319980 RPRMQ9NS64 109 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 SLC25A10Q9UBX3 287 aaPredicted RBP6.24□□□□□ -1.41
IFT88-201ENST00000319980 PPIAL4AQ9Y536 164 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 LOC105371267A0A1B0GV96 52 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.24□□□□□ -1.41
IFT88-201ENST00000319980 hADV38S2A0JD32 116 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 TMEM178BH3BS89 294 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 CCL21O00585 134 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 RPL31P62899 125 aaKnown RBP6.24□□□□□ -1.41
IFT88-201ENST00000319980 NCMAPQ5T1S8 102 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 DMRTC2Q8IXT2 367 aaPredicted RBP6.24□□□□□ -1.41
IFT88-201ENST00000319980 C1orf87Q8N0U7 546 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 OR10P1Q8NGE3 313 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 VSIRQ9H7M9 311 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 TMEM106BQ9NUM4 274 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 IDI2-AS1Q9NZ38 188 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 ZNRD1Q9P1U0 126 aa6.24□□□□□ -1.41
IFT88-201ENST00000319980 NKX6-3A6NJ46 265 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 ZNF729A6NN14 1252 aaPredicted RBP6.23□□□□□ -1.41
IFT88-201ENST00000319980 PLAUP00749 431 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 OR13C7P0DN81 318 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 NQO2P16083 231 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 GRNP28799 593 aaKnown RBP6.23□□□□□ -1.41
IFT88-201ENST00000319980 CA7P43166 264 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 ERVK-16P61578 105 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 MRPS11P82912 194 aaKnown RBP6.23□□□□□ -1.41
IFT88-201ENST00000319980 HAGHQ16775 308 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 CLRN3Q8NCR9 226 aa6.23□□□□□ -1.41
IFT88-201ENST00000319980 OR4A16Q8NH70 328 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms