RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 C1QL4Q86Z23 238 aa17.08■□□□□ 0.33
TTC39C-202ENST00000317571 RPP25LQ8N5L8 163 aaKnown RBP17.08■□□□□ 0.33
TTC39C-202ENST00000317571 ZNF251Q9BRH9 671 aa17.08■□□□□ 0.33
TTC39C-202ENST00000317571 QTRT1Q9BXR0 403 aaKnown RBP17.08■□□□□ 0.33
TTC39C-202ENST00000317571 NIT2Q9NQR4 276 aa17.08■□□□□ 0.33
TTC39C-202ENST00000317571 GNG12Q9UBI6 72 aa17.08■□□□□ 0.33
TTC39C-202ENST00000317571 IFNA17P01571 189 aa17.08■□□□□ 0.32
TTC39C-202ENST00000317571 RPS10P46783 165 aaKnown RBP17.08■□□□□ 0.32
TTC39C-202ENST00000317571 SERF2P84101 59 aa17.08■□□□□ 0.32
TTC39C-202ENST00000317571 TMEM41BQ5BJD5 291 aa17.08■□□□□ 0.32
TTC39C-202ENST00000317571 FAM90A2PQ658T7 463 aa17.08■□□□□ 0.32
TTC39C-202ENST00000317571 ZNF343Q6P1L6 599 aa17.08■□□□□ 0.32
TTC39C-202ENST00000317571 TRAT1Q6PIZ9 186 aa17.08■□□□□ 0.32
TTC39C-202ENST00000317571 TGIF2LYQ8IUE0 185 aa17.08■□□□□ 0.32
TTC39C-202ENST00000317571 IFI27L2Q9H2X8 130 aa17.08■□□□□ 0.32
TTC39C-202ENST00000317571 DCHS1Q96JQ0 3298 aa17.08■□□□□ 0.32
TTC39C-202ENST00000317571 GPR12P47775 334 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 EDDM3BP56851 147 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 TCTEX1D1Q8N7M0 179 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 LEAP2Q969E1 77 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 R3HDM4Q96D70 268 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 FAM234AQ9H0X4 552 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 JPT1Q9UK76 154 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 DMXL2Q8TDJ6 3036 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 LINC00587B1AMM8 73 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 FCGR3BO75015 233 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 FABP1P07148 127 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 CGB3P0DN86 165 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 CGB7P0DN87 165 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 BCL2P10415 239 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 TFF3Q07654 80 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 NCMAPQ5T1S8 102 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 GSN-AS1Q9NRJ2 163 aa17.07■□□□□ 0.32
TTC39C-202ENST00000317571 TET2Q6N021 2002 aaPredicted RBP17.06■□□□□ 0.32
TTC39C-202ENST00000317571 F2RL2O00254 374 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 GZMHP20718 246 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 BMP5P22003 454 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 C17orf58Q2M2W7 97 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 VKORC1L1Q8N0U8 176 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 FAM57AQ8TBR7 257 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 CUL9Q8IWT3 2517 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 A8MXE2 369 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 YPEL1O60688 119 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 FAM180AQ6UWF9 173 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 CENPVQ7Z7K6 275 aaPredicted RBP17.06■□□□□ 0.32
TTC39C-202ENST00000317571 Q8WTZ3 238 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 CA5BP1Q8WTZ4 195 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 YPEL2Q96QA6 119 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 TCEAL7Q9BRU2 100 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 SFXN3Q9BWM7 321 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 DCAF16Q9NXF7 216 aa17.06■□□□□ 0.32
TTC39C-202ENST00000317571 CISD1Q9NZ45 108 aaKnown RBP17.06■□□□□ 0.32
TTC39C-202ENST00000317571 CXCL1P09341 107 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 ELOBQ15370 118 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 C3orf36Q3SXR2 165 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 SSX9Q7RTT3 188 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 TCF23Q7RTU1 214 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 EDARADDQ8WWZ3 215 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 TVP23CQ96ET8 276 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 GCM1Q9NP62 436 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 URGCP-MRPS24S4R325 110 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 MUC6Q6W4X9 2439 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 A0A087WWC5 75 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 MAP1LC3B2A6NCE7 125 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 M0R1X1 148 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 IGHV1-46P01743 117 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 NIPSNAP3BQ9BS92 247 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 TMEM147Q9BVK8 224 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 MAP1LC3BQ9GZQ8 125 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 CALYQ9NYX4 217 aa17.05■□□□□ 0.32
TTC39C-202ENST00000317571 TANC2Q9HCD6 1990 aa17.04■□□□□ 0.32
TTC39C-202ENST00000317571 C15orf62A8K5M9 175 aa17.04■□□□□ 0.32
TTC39C-202ENST00000317571 HMGB3O15347 200 aaKnown RBP17.04■□□□□ 0.32
TTC39C-202ENST00000317571 RBMXL2O75526 392 aaKnown RBP17.04■□□□□ 0.32
TTC39C-202ENST00000317571 CYB5R3P00387 301 aaPredicted RBP17.04■□□□□ 0.32
TTC39C-202ENST00000317571 CRYABP02511 175 aaKnown RBP17.04■□□□□ 0.32
TTC39C-202ENST00000317571 GATA4P43694 442 aa17.04■□□□□ 0.32
TTC39C-202ENST00000317571 FAM222BQ8WU58 562 aa17.04■□□□□ 0.32
TTC39C-202ENST00000317571 TIMM9Q9Y5J7 89 aa17.04■□□□□ 0.32
TTC39C-202ENST00000317571 CEBPZOSA8MTT3 80 aa17.04■□□□□ 0.32
TTC39C-202ENST00000317571 DEFA4P12838 97 aa17.04■□□□□ 0.32
TTC39C-202ENST00000317571 ERVFRD-1P60508 538 aa17.04■□□□□ 0.32
TTC39C-202ENST00000317571 RAB11AP62491 216 aa17.04■□□□□ 0.32
TTC39C-202ENST00000317571 KIAA0141Q14154 515 aaPredicted RBP17.04■□□□□ 0.32
TTC39C-202ENST00000317571 OR10G4Q8NGN3 311 aa17.04■□□□□ 0.32
TTC39C-202ENST00000317571 LAMP3Q9UQV4 416 aa17.04■□□□□ 0.32
TTC39C-202ENST00000317571 SPTBN2O15020 2390 aa17.03■□□□□ 0.32
TTC39C-202ENST00000317571 TRAV3A0A0B4J244 114 aa17.03■□□□□ 0.32
TTC39C-202ENST00000317571 Q8N7P7 452 aa17.03■□□□□ 0.32
TTC39C-202ENST00000317571 MAP1BP46821 2468 aaKnown RBP17.03■□□□□ 0.32
TTC39C-202ENST00000317571 MDKP21741 143 aaPredicted RBP17.02■□□□□ 0.32
TTC39C-202ENST00000317571 FGF7P21781 194 aa17.02■□□□□ 0.32
TTC39C-202ENST00000317571 CD40P25942 277 aa17.02■□□□□ 0.32
TTC39C-202ENST00000317571 TLE1Q04724 770 aa17.02■□□□□ 0.32
TTC39C-202ENST00000317571 VWC2Q2TAL6 325 aa17.02■□□□□ 0.32
TTC39C-202ENST00000317571 AARDQ4LEZ3 155 aa17.02■□□□□ 0.32
TTC39C-202ENST00000317571 PPP1R35Q8TAP8 253 aa17.02■□□□□ 0.32
TTC39C-202ENST00000317571 PINX1Q96BK5 328 aaKnown RBP17.02■□□□□ 0.32
TTC39C-202ENST00000317571 TMPRSS5Q9H3S3 457 aa17.02■□□□□ 0.32
TTC39C-202ENST00000317571 SLC25A22Q9H936 323 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms