RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 SH2D2AQ9NP31 389 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 NGFP01138 241 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 PATE4P0C8F1 98 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 GNG4P50150 75 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 LGALS4P56470 323 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 EDDM3BP56851 147 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 OCC1Q8TAD7 63 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 BPTFQ12830 3046 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 TRBV20OR9-2A0A075B6H5 130 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 ADH4P08319 380 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 ATP5G3P48201 142 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 LHX2P50458 406 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 IL11RAQ14626 422 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 PRSS8Q16651 343 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 HLA-BQ31612 363 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 MORN2Q502X0 79 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 GPHA2Q96T91 129 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 GNB4Q9HAV0 340 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 ISLRO14498 428 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 CCL3P10147 92 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 GCHFRP30047 84 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 MLF1P58340 268 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 RBX1P62877 108 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF146Q15072 292 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 RAB30Q15771 203 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 FBXO46Q6PJ61 603 aaPredicted RBP4.02□□□□□ -1.77
PTPN13-201ENST00000316707 SCCPDHQ8NBX0 429 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 OR1K1Q8NGR3 316 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 OR10D3Q8NH80 312 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.02□□□□□ -1.77
PTPN13-201ENST00000316707 A6NNC1 897 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 SPINT2O43291 252 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 ZG16O60844 167 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 NEURL1O76050 574 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 HYAL1Q12794 435 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 TECRQ9NZ01 308 aaKnown RBP4.02□□□□□ -1.77
PTPN13-201ENST00000316707 FBXL7Q9UJT9 491 aa4.02□□□□□ -1.77
PTPN13-201ENST00000316707 SCN2AQ99250 2005 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 IGHV2-70DA0A0C4DH43 119 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 HELTA6NFD8 242 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 FNDC10F2Z333 226 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 SYNGR1O43759 233 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 NUPR1O60356 82 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 CCNOP22674 350 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 TSPOP30536 169 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 GABRA6Q16445 453 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 KRTCAP3Q53RY4 240 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF497Q6ZNH5 498 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 OR4C5Q8NGB2 326 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 POM121L2Q96KW2 1035 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 ST20Q9HBF5 79 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 OR1A1Q9P1Q5 309 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 USP34Q70CQ2 3546 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 NUP210LQ5VU65 1888 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 C5orf49A4QMS7 147 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 HYPMO75409 117 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 ARF6P62330 175 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 LRRC10Q5BKY1 277 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 OR4A16Q8NH70 328 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 SAP30LQ9HAJ7 183 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 BOKQ9UMX3 212 aaPredicted RBP4.01□□□□□ -1.77
PTPN13-201ENST00000316707 IGHV3-15A0A0B4J1V0 119 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 J3QR06 171 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 PPBPP02775 128 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 AMY1AP04745 511 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 ERVK11-1P61568 191 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 MMDQ15546 238 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 VAMP3Q15836 100 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 STPG4Q8N801 248 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 CPEB3Q8NE35 698 aaKnown RBP4.01□□□□□ -1.77
PTPN13-201ENST00000316707 OR2Y1Q8NGV0 311 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 OR1L1Q8NH94 360 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 TMEM190Q8WZ59 177 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 LRFN3Q9BTN0 628 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 SRXN1Q9BYN0 137 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 ENY2Q9NPA8 101 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 CLN8Q9UBY8 286 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 COX11Q9Y6N1 276 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 A0A1W2PRE2 83 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 OOEPA6NGQ2 149 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF891A8MT65 544 aaPredicted RBP4.01□□□□□ -1.77
PTPN13-201ENST00000316707 CRYAAP02489 173 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 HNF1AP20823 631 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 VEGFBP49765 207 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 PRAMEF5Q5TYX0 476 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 PRAMEF6Q5VXH4 476 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 TEPPQ6URK8 271 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 TREML4Q6UXN2 200 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 VASH2Q86V25 355 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 ST6GALNAC3Q8NDV1 305 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 OR4P4Q8NGL7 312 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 WIPF2Q8TF74 440 aaPredicted RBP4.01□□□□□ -1.77
PTPN13-201ENST00000316707 ALKBH7Q9BT30 221 aaPredicted RBP4.01□□□□□ -1.77
PTPN13-201ENST00000316707 HSBP1L1C9JCN9 74 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 SS18L1O75177 396 aaPredicted RBP4.01□□□□□ -1.77
PTPN13-201ENST00000316707 C3orf79P0CE67 100 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 CA7P43166 264 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 KIR2DS2P43631 304 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 TFF3Q07654 80 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 GATAD1Q8WUU5 269 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms