RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 CLRN3Q8NCR9 226 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 KAAG1Q9UBP8 84 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 SLC25A10Q9UBX3 287 aaPredicted RBP11.5□□□□□ -0.57
VAMP2-201ENST00000316509 KIAA2026Q5HYC2 2103 aa11.49□□□□□ -0.57
VAMP2-201ENST00000316509 PMS2P5A8MQ11 134 aa11.49□□□□□ -0.57
VAMP2-201ENST00000316509 MBP02144 154 aa11.49□□□□□ -0.57
VAMP2-201ENST00000316509 SFTPCP11686 197 aa11.49□□□□□ -0.57
VAMP2-201ENST00000316509 RUNX1Q01196 453 aa11.49□□□□□ -0.57
VAMP2-201ENST00000316509 VWC2Q2TAL6 325 aa11.49□□□□□ -0.57
VAMP2-201ENST00000316509 PRAMEF5Q5TYX0 476 aa11.49□□□□□ -0.57
VAMP2-201ENST00000316509 SLC25A48Q6ZT89 311 aaKnown RBP11.49□□□□□ -0.57
VAMP2-201ENST00000316509 TCF23Q7RTU1 214 aa11.49□□□□□ -0.57
VAMP2-201ENST00000316509 FAM216BQ8N7L0 139 aa11.49□□□□□ -0.57
VAMP2-201ENST00000316509 C8orf31Q8N9H6 132 aa11.49□□□□□ -0.57
VAMP2-201ENST00000316509 TAF15Q92804 592 aaKnown RBP eCLIP11.49□□□□□ -0.57
VAMP2-201ENST00000316509 PLPPR2Q96GM1 343 aa11.49□□□□□ -0.57
VAMP2-201ENST00000316509 GGACTQ9BVM4 153 aa11.49□□□□□ -0.57
VAMP2-201ENST00000316509 DYNLRB1Q9NP97 96 aa11.49□□□□□ -0.57
VAMP2-201ENST00000316509 FBXO7Q9Y3I1 522 aa11.49□□□□□ -0.57
VAMP2-201ENST00000316509 DCHS1Q96JQ0 3298 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 C9JQL5 133 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 TMPRSS2O15393 492 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 NDUFB3O43676 98 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 HRASP01112 189 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 SELLP14151 372 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 RPL39P5Q59GN2 51 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 DMRTC2Q8IXT2 367 aaPredicted RBP11.48□□□□□ -0.57
VAMP2-201ENST00000316509 ZNF251Q9BRH9 671 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 PRELID1Q9Y255 219 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 NDUFB7P17568 137 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 PPT1P50897 306 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 TMEM41BQ5BJD5 291 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 LRRC10Q5BKY1 277 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 FAM122AQ96E09 287 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 PRR14LQ5THK1 2151 aa11.48□□□□□ -0.57
VAMP2-201ENST00000316509 SVILO95425 2214 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 SLC31A2O15432 143 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 IFNA17P01571 189 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 HSPB1P04792 205 aaKnown RBP11.47□□□□□ -0.57
VAMP2-201ENST00000316509 OR9G9P0C7N8 305 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 KHDC3LQ587J8 217 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 ZNF506Q5JVG8 444 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 HEPN1Q6WQI6 88 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 OR10G4Q8NGN3 311 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 SFT2D1Q8WV19 159 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 QTRT1Q9BXR0 403 aaKnown RBP11.47□□□□□ -0.57
VAMP2-201ENST00000316509 PIEZO1Q92508 2521 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 SAA2-SAA4A0A096LPE2 208 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 FAM74A7A6NL05 159 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 NDUFS6O75380 124 aaKnown RBP11.47□□□□□ -0.57
VAMP2-201ENST00000316509 SAA2P0DJI9 122 aaPredicted RBP11.47□□□□□ -0.57
VAMP2-201ENST00000316509 RPL31P62899 125 aaKnown RBP11.47□□□□□ -0.57
VAMP2-201ENST00000316509 RELBQ01201 579 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 FAM74A3Q4VXF1 159 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 FAM71F2Q6NXP2 309 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 DUX4L9Q6RFH8 374 aaPredicted RBP11.47□□□□□ -0.57
VAMP2-201ENST00000316509 LYG1Q8N1E2 194 aa11.47□□□□□ -0.57
VAMP2-201ENST00000316509 MEX3AA1L020 520 aaKnown RBP11.46□□□□□ -0.57
VAMP2-201ENST00000316509 C17orf112F2Z3M2 114 aa11.46□□□□□ -0.57
VAMP2-201ENST00000316509 CCL21O00585 134 aa11.46□□□□□ -0.57
VAMP2-201ENST00000316509 NFYBP25208 207 aa11.46□□□□□ -0.57
VAMP2-201ENST00000316509 NPBWR1P48145 328 aa11.46□□□□□ -0.57
VAMP2-201ENST00000316509 ATP5IP56385 69 aaPredicted RBP11.46□□□□□ -0.57
VAMP2-201ENST00000316509 OR8G2PQ6IF36 304 aa11.46□□□□□ -0.57
VAMP2-201ENST00000316509 ZNF714Q96N38 554 aa11.46□□□□□ -0.57
VAMP2-201ENST00000316509 RPRMQ9NS64 109 aa11.46□□□□□ -0.57
VAMP2-201ENST00000316509 TMEM140Q9NV12 185 aa11.46□□□□□ -0.57
VAMP2-201ENST00000316509 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.45□□□□□ -0.58
VAMP2-201ENST00000316509 ARG1P05089 322 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 MDKP21741 143 aaPredicted RBP11.45□□□□□ -0.58
VAMP2-201ENST00000316509 PAX6P26367 422 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 TAGLN2P37802 199 aaKnown RBP11.45□□□□□ -0.58
VAMP2-201ENST00000316509 LINC00205P59089 165 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 RTL8BQ17RB0 113 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 IQCF2Q8IXL9 164 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 LINC00311Q8N616 119 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 ZNF596Q8TC21 504 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 CCL17Q92583 94 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 RSG1Q9BU20 258 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 TUBA4BQ9H853 241 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 SMCO4Q9NRQ5 59 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 FOXA2Q9Y261 457 aaPredicted RBP11.45□□□□□ -0.58
VAMP2-201ENST00000316509 RFNGQ9Y644 331 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 ARID1AO14497 2285 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 GPR37O15354 613 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 MPDU1O75352 247 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 VDAC2P45880 294 aaPredicted RBP11.45□□□□□ -0.58
VAMP2-201ENST00000316509 CCL20P78556 96 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 SOHLH1Q5JUK2 328 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 ZNF709Q8N972 641 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 CLDND2Q8NHS1 167 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 DCAF16Q9NXF7 216 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 SPTBN4Q9H254 2564 aa11.45□□□□□ -0.58
VAMP2-201ENST00000316509 IGHV1-69-2A0A0G2JMI3 117 aa11.44□□□□□ -0.58
VAMP2-201ENST00000316509 C15orf61A6NNL5 157 aa11.44□□□□□ -0.58
VAMP2-201ENST00000316509 IL6RP08887 468 aaPredicted RBP11.44□□□□□ -0.58
VAMP2-201ENST00000316509 ATF4P18848 351 aaPredicted RBP11.44□□□□□ -0.58
VAMP2-201ENST00000316509 HSPE1P61604 102 aaKnown RBP11.44□□□□□ -0.58
VAMP2-201ENST00000316509 RAB11AP62491 216 aa11.44□□□□□ -0.58
VAMP2-201ENST00000316509 RHEBQ15382 184 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms