RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 GAL3ST2Q9H3Q3 398 aa12.88□□□□□ -0.35
CALR-201ENST00000316448 MIOXQ9UGB7 285 aa12.88□□□□□ -0.35
CALR-201ENST00000316448 TOR1AO14656 332 aa12.87□□□□□ -0.35
CALR-201ENST00000316448 SYNGR2O43760 224 aa12.87□□□□□ -0.35
CALR-201ENST00000316448 ATG12O94817 140 aa12.87□□□□□ -0.35
CALR-201ENST00000316448 GOSR1O95249 250 aa12.87□□□□□ -0.35
CALR-201ENST00000316448 SEC11BP0C7V7 166 aa12.87□□□□□ -0.35
CALR-201ENST00000316448 SPP1P10451 314 aa12.87□□□□□ -0.35
CALR-201ENST00000316448 MIDNQ504T8 468 aa12.87□□□□□ -0.35
CALR-201ENST00000316448 SLC25A48Q6ZT89 311 aaKnown RBP12.87□□□□□ -0.35
CALR-201ENST00000316448 CCDC28AQ8IWP9 274 aa12.87□□□□□ -0.35
CALR-201ENST00000316448 CD300LFQ8TDQ1 290 aa12.87□□□□□ -0.35
CALR-201ENST00000316448 TIMD4Q96H15 378 aa12.87□□□□□ -0.35
CALR-201ENST00000316448 PATZ1Q9HBE1 687 aaKnown RBP12.87□□□□□ -0.35
CALR-201ENST00000316448 PLA2G2EQ9NZK7 142 aa12.87□□□□□ -0.35
CALR-201ENST00000316448 GAB2Q9UQC2 676 aa12.87□□□□□ -0.35
CALR-201ENST00000316448 DOCK11Q5JSL3 2073 aa12.87□□□□□ -0.35
CALR-201ENST00000316448 UTP20O75691 2785 aaKnown RBP12.87□□□□□ -0.35
CALR-201ENST00000316448 ARHGAP32A7KAX9 2087 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 C22orf46C9J442 243 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 M0R1X1 148 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 SHOXO15266 292 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 FBXO24O75426 580 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 IGHV4-39P01824 125 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 G6PCP35575 357 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 PRB3Q04118 309 aaPredicted RBP12.86□□□□□ -0.35
CALR-201ENST00000316448 ZNF266Q14584 549 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 ZNF525Q8N782 197 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.86□□□□□ -0.35
CALR-201ENST00000316448 OR10A7Q8NGE5 316 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 OR8B3Q8NGG8 313 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 OR8B2Q96RD0 313 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 SAA2-SAA4A0A096LPE2 208 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 ZNF705EA8MWA4 302 aaPredicted RBP12.86□□□□□ -0.35
CALR-201ENST00000316448 RBFOX2O43251 390 aaKnown RBP eCLIP12.86□□□□□ -0.35
CALR-201ENST00000316448 TXNL1O43396 289 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 KRASP01116 189 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 SAA2P0DJI9 122 aaPredicted RBP12.86□□□□□ -0.35
CALR-201ENST00000316448 GPR6P46095 362 aaPredicted RBP12.86□□□□□ -0.35
CALR-201ENST00000316448 TAS2R30P59541 319 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 LYG1Q8N1E2 194 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 NRGNQ92686 78 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 LINC00052Q96N35 136 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 HSPB7Q9UBY9 170 aa12.86□□□□□ -0.35
CALR-201ENST00000316448 TRBV23-1A0A0A0MS06 115 aa12.85□□□□□ -0.35
CALR-201ENST00000316448 RAB19A4D1S5 217 aa12.85□□□□□ -0.35
CALR-201ENST00000316448 KRBOX1C9JBD0 128 aa12.85□□□□□ -0.35
CALR-201ENST00000316448 COL8A1P27658 744 aa12.85□□□□□ -0.35
CALR-201ENST00000316448 RPL23AP62750 156 aaKnown RBP12.85□□□□□ -0.35
CALR-201ENST00000316448 TNFRSF9Q07011 255 aa12.85□□□□□ -0.35
CALR-201ENST00000316448 LY6G5BQ8NDX9 201 aa12.85□□□□□ -0.35
CALR-201ENST00000316448 OR5C1Q8NGR4 320 aa12.85□□□□□ -0.35
CALR-201ENST00000316448 DDB2Q92466 427 aa12.85□□□□□ -0.35
CALR-201ENST00000316448 MARCH11A6NNE9 402 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 RAB29O14966 203 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 CST7O76096 145 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 IGHV1-8P0DP01 117 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 DYNLT3P51808 116 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 CLINT1Q14677 625 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 PXDC1Q5TGL8 231 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 STX12Q86Y82 276 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 STPG2Q8N412 459 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 C8orf46Q8TAG6 207 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 MARC2Q969Z3 335 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 CHD6Q8TD26 2715 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 PPIAL4CA0A0B4J2A2 164 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 NUDT19A8MXV4 375 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 H3BP45 60 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 MED6O75586 246 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 PPIAL4GP0DN37 164 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 SULT1A1P50225 295 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 UQCC3Q6UW78 93 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 SH3BGRL3Q9H299 93 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 PARP11Q9NR21 331 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 MMP26Q9NRE1 261 aa12.84□□□□□ -0.35
CALR-201ENST00000316448 UBE2KP61086 200 aa12.83□□□□□ -0.36
CALR-201ENST00000316448 DIAPH2-AS1Q14236 149 aa12.83□□□□□ -0.36
CALR-201ENST00000316448 AARDQ4LEZ3 155 aa12.83□□□□□ -0.36
CALR-201ENST00000316448 ZNF383Q8NA42 475 aa12.83□□□□□ -0.36
CALR-201ENST00000316448 CCL19Q99731 98 aa12.83□□□□□ -0.36
CALR-201ENST00000316448 FAM208BQ5VWN6 2430 aa12.83□□□□□ -0.36
CALR-201ENST00000316448 A0A087X0M5 115 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 A0A1B0GX30 115 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 FAM90A9PA6NNJ1 464 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 GPR37O15354 613 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 FCGR3BO75015 233 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 HPRT1P00492 218 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 IAPPP10997 89 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 ZFP36P26651 326 aaKnown RBP12.82□□□□□ -0.36
CALR-201ENST00000316448 KIR2DS2P43631 304 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 IL34Q6ZMJ4 242 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 H2BFWTQ7Z2G1 175 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 TMEM217Q8N7C4 229 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 HSD17B11Q8NBQ5 300 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 LYPD6BQ8NI32 183 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 ZNF596Q8TC21 504 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 R3HDM4Q96D70 268 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 ATP5SQ99766 215 aa12.82□□□□□ -0.36
CALR-201ENST00000316448 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.82□□□□□ -0.36
CALR-201ENST00000316448 J3QR06 171 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms