RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 TMEM249Q2WGJ8 235 aa13.16□□□□□ -0.3
TUBB3-201ENST00000315491 ABCA11PQ4W5N1 156 aa13.16□□□□□ -0.3
TUBB3-201ENST00000315491 PHLDA2Q53GA4 152 aa13.16□□□□□ -0.3
TUBB3-201ENST00000315491 SLC25A42Q86VD7 318 aa13.16□□□□□ -0.3
TUBB3-201ENST00000315491 LINC00311Q8N616 119 aa13.16□□□□□ -0.3
TUBB3-201ENST00000315491 OR13D1Q8NGV5 346 aa13.16□□□□□ -0.3
TUBB3-201ENST00000315491 THAP6Q8TBB0 222 aa13.16□□□□□ -0.3
TUBB3-201ENST00000315491 ZNF596Q8TC21 504 aa13.16□□□□□ -0.3
TUBB3-201ENST00000315491 TMEM186Q96B77 213 aa13.16□□□□□ -0.3
TUBB3-201ENST00000315491 AKR1E2Q96JD6 320 aa13.16□□□□□ -0.3
TUBB3-201ENST00000315491 TCEAL7Q9BRU2 100 aa13.16□□□□□ -0.3
TUBB3-201ENST00000315491 CLEC7AQ9BXN2 247 aa13.16□□□□□ -0.3
TUBB3-201ENST00000315491 OR51M1Q9H341 326 aa13.16□□□□□ -0.3
TUBB3-201ENST00000315491 IGLV2-14P01704 120 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 GPR12P47775 334 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 TAS2R31P59538 309 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 RAB5BP61020 215 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 MSMO1Q15800 293 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 ACOT7LQ6ZUV0 252 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 TNFRSF14Q92956 283 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 TMEM230Q96A57 120 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 MSI2Q96DH6 328 aaKnown RBP13.15□□□□□ -0.3
TUBB3-201ENST00000315491 TBX15Q96SF7 602 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 PCGF1Q9BSM1 259 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 SEC11CQ9BY50 192 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 SLC2A9Q9NRM0 540 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 HIF1ANQ9NWT6 349 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 ZNRD1Q9P1U0 126 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 PRRC2AP48634 2157 aaKnown RBP13.15□□□□□ -0.3
TUBB3-201ENST00000315491 PDZD2O15018 2839 aa13.15□□□□□ -0.3
TUBB3-201ENST00000315491 RNF222A6NCQ9 220 aa13.15□□□□□ -0.31
TUBB3-201ENST00000315491 AKR1C4P17516 323 aa13.15□□□□□ -0.31
TUBB3-201ENST00000315491 S100PP25815 95 aa13.15□□□□□ -0.31
TUBB3-201ENST00000315491 PIGPP57054 158 aa13.15□□□□□ -0.31
TUBB3-201ENST00000315491 C11orf87Q6NUJ2 197 aa13.15□□□□□ -0.31
TUBB3-201ENST00000315491 CMTM1Q8IZ96 169 aa13.15□□□□□ -0.31
TUBB3-201ENST00000315491 LYG1Q8N1E2 194 aa13.15□□□□□ -0.31
TUBB3-201ENST00000315491 PNKDQ8N490 385 aa13.15□□□□□ -0.31
TUBB3-201ENST00000315491 DRAM1Q8N682 238 aa13.15□□□□□ -0.31
TUBB3-201ENST00000315491 CCDC71LQ8N9Z2 235 aa13.15□□□□□ -0.31
TUBB3-201ENST00000315491 ZBTB34Q8NCN2 500 aa13.15□□□□□ -0.31
TUBB3-201ENST00000315491 OR5M8Q8NGP6 311 aa13.15□□□□□ -0.31
TUBB3-201ENST00000315491 RXFP4Q8TDU9 374 aa13.15□□□□□ -0.31
TUBB3-201ENST00000315491 UBE2CO00762 179 aa13.14□□□□□ -0.31
TUBB3-201ENST00000315491 GATA3P23771 443 aa13.14□□□□□ -0.31
TUBB3-201ENST00000315491 PRRX1P54821 245 aa13.14□□□□□ -0.31
TUBB3-201ENST00000315491 RND3P61587 244 aa13.14□□□□□ -0.31
TUBB3-201ENST00000315491 BLOC1S1P78537 153 aa13.14□□□□□ -0.31
TUBB3-201ENST00000315491 KLRD1Q13241 179 aa13.14□□□□□ -0.31
TUBB3-201ENST00000315491 NCR3LG1Q68D85 454 aa13.14□□□□□ -0.31
TUBB3-201ENST00000315491 HCP5Q6MZN7 132 aa13.14□□□□□ -0.31
TUBB3-201ENST00000315491 ODF3L1Q8IXM7 274 aa13.14□□□□□ -0.31
TUBB3-201ENST00000315491 C5orf30Q96GV9 206 aa13.14□□□□□ -0.31
TUBB3-201ENST00000315491 GAB2Q9UQC2 676 aa13.14□□□□□ -0.31
TUBB3-201ENST00000315491 ABCA2Q9BZC7 2435 aa13.13□□□□□ -0.31
TUBB3-201ENST00000315491 RAB29O14966 203 aa13.13□□□□□ -0.31
TUBB3-201ENST00000315491 TNFSF12O43508 249 aa13.13□□□□□ -0.31
TUBB3-201ENST00000315491 OR4E1P0C645 316 aa13.13□□□□□ -0.31
TUBB3-201ENST00000315491 HOXB4P17483 251 aaPredicted RBP13.13□□□□□ -0.31
TUBB3-201ENST00000315491 S100GP29377 79 aa13.13□□□□□ -0.31
TUBB3-201ENST00000315491 UBE2MP61081 183 aaKnown RBP13.13□□□□□ -0.31
TUBB3-201ENST00000315491 C4orf46Q504U0 113 aa13.13□□□□□ -0.31
TUBB3-201ENST00000315491 FAHD2BQ6P2I3 314 aaPredicted RBP13.13□□□□□ -0.31
TUBB3-201ENST00000315491 IL34Q6ZMJ4 242 aa13.13□□□□□ -0.31
TUBB3-201ENST00000315491 CIARTQ8N365 385 aaPredicted RBP13.13□□□□□ -0.31
TUBB3-201ENST00000315491 BEND2Q8NDZ0 799 aa13.13□□□□□ -0.31
TUBB3-201ENST00000315491 OR11H6Q8NGC7 330 aa13.13□□□□□ -0.31
TUBB3-201ENST00000315491 OR10X1Q8NGY0 326 aa13.13□□□□□ -0.31
TUBB3-201ENST00000315491 STOML3Q8TAV4 291 aa13.13□□□□□ -0.31
TUBB3-201ENST00000315491 RTN4IP1Q8WWV3 396 aaPredicted RBP13.13□□□□□ -0.31
TUBB3-201ENST00000315491 FAHD2AQ96GK7 314 aa13.13□□□□□ -0.31
TUBB3-201ENST00000315491 ZNF471Q9BX82 626 aaPredicted RBP13.13□□□□□ -0.31
TUBB3-201ENST00000315491 VPS13CQ709C8 3753 aa13.13□□□□□ -0.31
TUBB3-201ENST00000315491 MED13LQ71F56 2210 aa13.13□□□□□ -0.31
TUBB3-201ENST00000315491 SAA2-SAA4A0A096LPE2 208 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 PGLYRP1O75594 196 aaPredicted RBP13.12□□□□□ -0.31
TUBB3-201ENST00000315491 TGFAP01135 160 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 IGLV1-47P01700 117 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 SAA2P0DJI9 122 aaPredicted RBP13.12□□□□□ -0.31
TUBB3-201ENST00000315491 HLA-GP17693 338 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 PPP1R1AQ13522 171 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 HLA-DRB5Q30154 266 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 RPL39P5Q59GN2 51 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 TMEM128Q5BJH2 165 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.12□□□□□ -0.31
TUBB3-201ENST00000315491 COMMD9Q9P000 198 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 TEX13DA0A0J9YY54 714 aaPredicted RBP13.12□□□□□ -0.31
TUBB3-201ENST00000315491 C5orf52A6NGY3 159 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 CRYM-AS1A6NIL9 109 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 RNASEK-C17orf49H0YIS7 233 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 SMAD7O15105 426 aaKnown RBP13.12□□□□□ -0.31
TUBB3-201ENST00000315491 MPPED1O15442 326 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 IL3RAP26951 378 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 NPBWR1P48145 328 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 HABP2Q14520 560 aaPredicted RBP13.12□□□□□ -0.31
TUBB3-201ENST00000315491 CYB5R2Q6BCY4 276 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 TBC1D26Q86UD7 250 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 SGPP2Q8IWX5 399 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 GPHA2Q96T91 129 aa13.12□□□□□ -0.31
TUBB3-201ENST00000315491 C7orf69Q9H7B7 122 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms