RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CROCCP3Q8IVE0 287 aa15.31■□□□□ 0.04
PDZRN3-202ENST00000308537 DPF1Q92782 380 aa15.31■□□□□ 0.04
PDZRN3-202ENST00000308537 YIPF6Q96EC8 236 aa15.31■□□□□ 0.04
PDZRN3-202ENST00000308537 HARBI1Q96MB7 349 aa15.31■□□□□ 0.04
PDZRN3-202ENST00000308537 OR2W1Q9Y3N9 320 aa15.31■□□□□ 0.04
PDZRN3-202ENST00000308537 TRIM64CA6NLI5 447 aa15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 SEC14L6B5MCN3 397 aa15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 AIREO43918 545 aa15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 LGALS1P09382 135 aaKnown RBP15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 OR8U8P0C7N1 319 aa15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 BRWD1-AS2P59051 145 aa15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 RPL30P62888 115 aaKnown RBP15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 PITPNAQ00169 270 aa15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 TAGLNQ01995 201 aaKnown RBP15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 TMEM267Q0VDI3 215 aaPredicted RBP15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 IDNKQ5T6J7 187 aa15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 C9orf66Q5T8R8 295 aa15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 CNIH2Q6PI25 160 aa15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 HUWE1Q7Z6Z7 4374 aaKnown RBP15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 RHOVQ96L33 236 aa15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 ANXA10Q9UJ72 324 aa15.3■□□□□ 0.04
PDZRN3-202ENST00000308537 IGHV4OR15-8A0A075B7B6 117 aa15.29■□□□□ 0.04
PDZRN3-202ENST00000308537 A0A087WW49 117 aa15.29■□□□□ 0.04
PDZRN3-202ENST00000308537 DGCR2P98153 550 aa15.29■□□□□ 0.04
PDZRN3-202ENST00000308537 PYHIN1Q6K0P9 492 aa15.29■□□□□ 0.04
PDZRN3-202ENST00000308537 ZNF645Q8N7E2 425 aa15.29■□□□□ 0.04
PDZRN3-202ENST00000308537 GRPEL2Q8TAA5 225 aa15.29■□□□□ 0.04
PDZRN3-202ENST00000308537 ABHD5Q8WTS1 349 aa15.29■□□□□ 0.04
PDZRN3-202ENST00000308537 DCUN1D4Q92564 292 aa15.29■□□□□ 0.04
PDZRN3-202ENST00000308537 LSM4Q9Y4Z0 139 aaKnown RBP15.29■□□□□ 0.04
PDZRN3-202ENST00000308537 STAB2Q8WWQ8 2551 aa15.28■□□□□ 0.04
PDZRN3-202ENST00000308537 RBMXL2O75526 392 aaKnown RBP15.28■□□□□ 0.04
PDZRN3-202ENST00000308537 CTXN2P0C2S0 81 aa15.28■□□□□ 0.04
PDZRN3-202ENST00000308537 PTHLHP12272 177 aa15.28■□□□□ 0.04
PDZRN3-202ENST00000308537 SLURP1P55000 103 aa15.28■□□□□ 0.04
PDZRN3-202ENST00000308537 GNG2P59768 71 aa15.28■□□□□ 0.04
PDZRN3-202ENST00000308537 OVCH2Q7RTZ1 564 aa15.28■□□□□ 0.04
PDZRN3-202ENST00000308537 GVQW1Q8N7I0 195 aa15.28■□□□□ 0.04
PDZRN3-202ENST00000308537 DLX4Q92988 240 aaPredicted RBP15.28■□□□□ 0.04
PDZRN3-202ENST00000308537 ADTRPQ96IZ2 230 aa15.28■□□□□ 0.04
PDZRN3-202ENST00000308537 MS4A10Q96PG2 267 aa15.28■□□□□ 0.04
PDZRN3-202ENST00000308537 SPATA2Q9UM82 520 aa15.28■□□□□ 0.04
PDZRN3-202ENST00000308537 RBMX2Q9Y388 322 aaKnown RBP15.28■□□□□ 0.04
PDZRN3-202ENST00000308537 TRAV18A0A075B6X5 111 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 A0A0A6YYH2 397 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 A6NJ64 397 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 J3QRK9 145 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 SHOXO15266 292 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 RAMP3O60896 148 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 BRI3O95415 125 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 CRYZL1O95825 349 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 IGHV3-11P01762 117 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 RRASP10301 218 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 UBE2KP61086 200 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 RTL8BQ17RB0 113 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 POC5Q8NA72 575 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 SLA2Q9H6Q3 261 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 AUNIPQ9H7T9 357 aa15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 RBM7Q9Y580 266 aaKnown RBP15.27■□□□□ 0.04
PDZRN3-202ENST00000308537 LINC01619G3V211 115 aa15.26■□□□□ 0.03
PDZRN3-202ENST00000308537 RPS19P39019 145 aaKnown RBP15.26■□□□□ 0.03
PDZRN3-202ENST00000308537 TPPP2P59282 170 aa15.26■□□□□ 0.03
PDZRN3-202ENST00000308537 PRSS8Q16651 343 aa15.26■□□□□ 0.03
PDZRN3-202ENST00000308537 C11orf87Q6NUJ2 197 aa15.26■□□□□ 0.03
PDZRN3-202ENST00000308537 IDO2Q6ZQW0 420 aa15.26■□□□□ 0.03
PDZRN3-202ENST00000308537 HOGA1Q86XE5 327 aa15.26■□□□□ 0.03
PDZRN3-202ENST00000308537 TEX45Q8NA69 505 aa15.26■□□□□ 0.03
PDZRN3-202ENST00000308537 OSR1Q8TAX0 266 aaPredicted RBP15.26■□□□□ 0.03
PDZRN3-202ENST00000308537 SNAPC3Q92966 411 aa15.26■□□□□ 0.03
PDZRN3-202ENST00000308537 PRR25Q96S07 402 aa15.26■□□□□ 0.03
PDZRN3-202ENST00000308537 H3BUA1 57 aa15.25■□□□□ 0.03
PDZRN3-202ENST00000308537 DEFB121Q5J5C9 76 aa15.25■□□□□ 0.03
PDZRN3-202ENST00000308537 BEST4Q8NFU0 473 aa15.25■□□□□ 0.03
PDZRN3-202ENST00000308537 OR5T1Q8NG75 326 aa15.25■□□□□ 0.03
PDZRN3-202ENST00000308537 B9D2Q9BPU9 175 aa15.25■□□□□ 0.03
PDZRN3-202ENST00000308537 TENM3Q9P273 2699 aa15.24■□□□□ 0.03
PDZRN3-202ENST00000308537 OVOL1O14753 267 aa15.24■□□□□ 0.03
PDZRN3-202ENST00000308537 TRGV3P03979 118 aa15.24■□□□□ 0.03
PDZRN3-202ENST00000308537 SAA1P0DJI8 122 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-202ENST00000308537 GPHA2Q96T91 129 aa15.24■□□□□ 0.03
PDZRN3-202ENST00000308537 MRPS26Q9BYN8 205 aaKnown RBP15.24■□□□□ 0.03
PDZRN3-202ENST00000308537 ZNF430Q9H8G1 570 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-202ENST00000308537 FCGR3BO75015 233 aa15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 CNIH1O95406 144 aa15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 HSPB1P04792 205 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 ECI1P42126 302 aa15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 INSL3P51460 131 aa15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 LSM3P62310 102 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 DEFA5Q01523 94 aa15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 ACSM6Q6P461 480 aa15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 KCTD9Q7L273 389 aa15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 ADAD2Q8NCV1 583 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 TMEM68Q96MH6 324 aa15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 FUNDC2Q9BWH2 189 aa15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 TINAGL1Q9GZM7 467 aaPredicted RBP15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 DIABLOQ9NR28 239 aa15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 ZMAT5Q9UDW3 170 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 ANAPC10Q9UM13 185 aa15.23■□□□□ 0.03
PDZRN3-202ENST00000308537 XRCC3O43542 346 aa15.22■□□□□ 0.03
PDZRN3-202ENST00000308537 SLC22A5O76082 557 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms