RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 CACNA1BQ00975 2339 aa18.5■□□□□ 0.55
PDLIM2-202ENST00000308354 hADV38S2A0JD32 116 aa18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 M0R1X1 148 aa18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 CD5P06127 495 aa18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 RUNX1Q01196 453 aa18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 MSMO1Q15800 293 aa18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 SVBPQ8N300 66 aa18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 RBMXL1Q96E39 390 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 ABHD14AQ9BUJ0 271 aa18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 IDI2-AS1Q9NZ38 188 aa18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 STRAPQ9Y3F4 350 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 ZNF729A6NN14 1252 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 C9JQL5 133 aa18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 DVL1O14640 695 aa18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 F12P00748 615 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 DUTP33316 252 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 ZNF66Q6ZN08 573 aa18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 FAM213BQ8TBF2 198 aa18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 HSD17B10Q99714 261 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 PSENENQ9NZ42 101 aa18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 ZNRD1Q9P1U0 126 aa18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 CARHSP1Q9Y2V2 147 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-202ENST00000308354 TOR1AO14656 332 aa18.48■□□□□ 0.55
PDLIM2-202ENST00000308354 NDUFB3O43676 98 aa18.48■□□□□ 0.55
PDLIM2-202ENST00000308354 CORO2AQ92828 525 aa18.48■□□□□ 0.55
PDLIM2-202ENST00000308354 USP24Q9UPU5 2620 aa18.48■□□□□ 0.55
PDLIM2-202ENST00000308354 FAM74A7A6NL05 159 aa18.47■□□□□ 0.55
PDLIM2-202ENST00000308354 P0C879 139 aa18.47■□□□□ 0.55
PDLIM2-202ENST00000308354 FAM74A3Q4VXF1 159 aa18.47■□□□□ 0.55
PDLIM2-202ENST00000308354 TMEM200BQ69YZ2 307 aa18.47■□□□□ 0.55
PDLIM2-202ENST00000308354 SEC11CQ9BY50 192 aa18.47■□□□□ 0.55
PDLIM2-202ENST00000308354 COA4Q9NYJ1 87 aa18.47■□□□□ 0.55
PDLIM2-202ENST00000308354 LINC00312Q9Y6C7 94 aa18.47■□□□□ 0.55
PDLIM2-202ENST00000308354 A0A1B0GV50 99 aa18.47■□□□□ 0.55
PDLIM2-202ENST00000308354 SOD3P08294 240 aa18.47■□□□□ 0.55
PDLIM2-202ENST00000308354 SFTA3P0C7M3 94 aa18.47■□□□□ 0.55
PDLIM2-202ENST00000308354 METTL15P1P0C7V9 234 aa18.47■□□□□ 0.55
PDLIM2-202ENST00000308354 SNCAP37840 140 aa18.47■□□□□ 0.55
PDLIM2-202ENST00000308354 DVL1P1P54792 670 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-202ENST00000308354 TRIM77I1YAP6 450 aa18.46■□□□□ 0.55
PDLIM2-202ENST00000308354 DNASE2O00115 360 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-202ENST00000308354 FCGR3BO75015 233 aa18.46■□□□□ 0.55
PDLIM2-202ENST00000308354 LRRC10Q5BKY1 277 aa18.46■□□□□ 0.55
PDLIM2-202ENST00000308354 RAB9BQ9NP90 201 aa18.46■□□□□ 0.55
PDLIM2-202ENST00000308354 A0A1W2PPR1 153 aa18.46■□□□□ 0.55
PDLIM2-202ENST00000308354 FAM157AC9JC47 383 aa18.46■□□□□ 0.55
PDLIM2-202ENST00000308354 C19orf84I3L1E1 186 aa18.46■□□□□ 0.55
PDLIM2-202ENST00000308354 UBE2KP61086 200 aa18.46■□□□□ 0.55
PDLIM2-202ENST00000308354 LYG1Q8N1E2 194 aa18.46■□□□□ 0.55
PDLIM2-202ENST00000308354 SAA2-SAA4A0A096LPE2 208 aa18.45■□□□□ 0.54
PDLIM2-202ENST00000308354 SAA2P0DJI9 122 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-202ENST00000308354 TNFRSF9Q07011 255 aa18.45■□□□□ 0.54
PDLIM2-202ENST00000308354 ARL16Q0P5N6 197 aa18.45■□□□□ 0.54
PDLIM2-202ENST00000308354 LINC00574Q9H8X3 128 aa18.45■□□□□ 0.54
PDLIM2-202ENST00000308354 FAM90A26D6RGX4 464 aa18.45■□□□□ 0.54
PDLIM2-202ENST00000308354 SPANXN5Q5MJ07 72 aa18.45■□□□□ 0.54
PDLIM2-202ENST00000308354 AVPI1Q5T686 147 aa18.45■□□□□ 0.54
PDLIM2-202ENST00000308354 HAPLN4Q86UW8 402 aa18.45■□□□□ 0.54
PDLIM2-202ENST00000308354 ZNF439Q8NDP4 499 aa18.45■□□□□ 0.54
PDLIM2-202ENST00000308354 GNPNAT1Q96EK6 184 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-202ENST00000308354 RBKSQ9H477 322 aa18.45■□□□□ 0.54
PDLIM2-202ENST00000308354 RPUSD1Q9UJJ7 312 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-202ENST00000308354 DFFBO76075 338 aa18.44■□□□□ 0.54
PDLIM2-202ENST00000308354 MEF2CQ06413 473 aaPredicted RBP18.44■□□□□ 0.54
PDLIM2-202ENST00000308354 ZNF714Q96N38 554 aa18.44■□□□□ 0.54
PDLIM2-202ENST00000308354 HSPB7Q9UBY9 170 aa18.44■□□□□ 0.54
PDLIM2-202ENST00000308354 UMAD1C9J7I0 102 aa18.43■□□□□ 0.54
PDLIM2-202ENST00000308354 PPOXP50336 477 aa18.43■□□□□ 0.54
PDLIM2-202ENST00000308354 RAB7AP51149 207 aa18.43■□□□□ 0.54
PDLIM2-202ENST00000308354 COMMD1Q8N668 190 aa18.43■□□□□ 0.54
PDLIM2-202ENST00000308354 TCTEX1D1Q8N7M0 179 aa18.43■□□□□ 0.54
PDLIM2-202ENST00000308354 SCRT1Q9BWW7 348 aa18.43■□□□□ 0.54
PDLIM2-202ENST00000308354 CBLN4Q9NTU7 201 aa18.43■□□□□ 0.54
PDLIM2-202ENST00000308354 ZFYVE26Q68DK2 2539 aa18.43■□□□□ 0.54
PDLIM2-202ENST00000308354 TAS2R30P59541 319 aa18.43■□□□□ 0.54
PDLIM2-202ENST00000308354 GUK1Q16774 197 aa18.43■□□□□ 0.54
PDLIM2-202ENST00000308354 SSX9Q7RTT3 188 aa18.43■□□□□ 0.54
PDLIM2-202ENST00000308354 GAL3ST2Q9H3Q3 398 aa18.43■□□□□ 0.54
PDLIM2-202ENST00000308354 KAAG1Q9UBP8 84 aa18.43■□□□□ 0.54
PDLIM2-202ENST00000308354 COL12A1Q99715 3063 aa18.43■□□□□ 0.54
PDLIM2-202ENST00000308354 MRPS11P82912 194 aaKnown RBP18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 TAGLNQ01995 201 aaKnown RBP18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 SLC25A24Q6NUK1 477 aa18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 VKORC1L1Q8N0U8 176 aa18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 ZNF251Q9BRH9 671 aa18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 LAMP3Q9UQV4 416 aa18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 MARCH11A6NNE9 402 aa18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 GPR37O15354 613 aa18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 IFNA5P01569 189 aa18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 PPT1P50897 306 aa18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 H2BFWTQ7Z2G1 175 aa18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 THNSL2Q86YJ6 484 aa18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 EIF5A2Q9GZV4 153 aaKnown RBP18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 FBXO7Q9Y3I1 522 aa18.42■□□□□ 0.54
PDLIM2-202ENST00000308354 ITGB1BP1O14713 200 aa18.41■□□□□ 0.54
PDLIM2-202ENST00000308354 RAB29O14966 203 aa18.41■□□□□ 0.54
PDLIM2-202ENST00000308354 NPBWR1P48145 328 aa18.41■□□□□ 0.54
PDLIM2-202ENST00000308354 SPTAN1Q13813 2472 aaKnown RBP18.41■□□□□ 0.54
PDLIM2-202ENST00000308354 ZNF525Q8N782 197 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms