RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 EWSR1Q01844 656 aaKnown RBP eCLIP9.75□□□□□ -0.85
TRIM40-205ENST00000307859 FAM74A1Q5RGS3 127 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 C1orf229Q6ZS94 237 aaPredicted RBP9.75□□□□□ -0.85
TRIM40-205ENST00000307859 ZNF295-AS1Q8N0V1 137 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 H1FXQ92522 213 aaKnown RBP9.75□□□□□ -0.85
TRIM40-205ENST00000307859 BSCL2Q96G97 398 aaPredicted RBP9.75□□□□□ -0.85
TRIM40-205ENST00000307859 RAB40CQ96S21 281 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 ARV1Q9H2C2 271 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 CELSR1Q9NYQ6 3014 aa9.75□□□□□ -0.85
TRIM40-205ENST00000307859 TRBV23-1A0A0A0MS06 115 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 ANKRD34BA5PLL1 514 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 FAM24AA6NFZ4 105 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 TOR1AO14656 332 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 CHST1O43916 411 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 NXPH3O95157 252 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 THBS3P49746 956 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 TMEM155Q4W5P6 130 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 COMMD7Q86VX2 200 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 PDZD9Q8IXQ8 264 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 TMEM252Q8N6L7 170 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 UBAC2Q8NBM4 344 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 ADTRPQ96IZ2 230 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 CXorf58Q96LI9 332 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 SLC25A31Q9H0C2 315 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 MALRD1Q5VYJ5 2156 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 A0A1W2PPE3 182 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 SYNGR2O43760 224 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 FCGR3BO75015 233 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 HPRT1P00492 218 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 KRASP01116 189 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 GNG10P50151 68 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 CAV2P51636 162 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 NHLH2Q02577 135 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 BAXQ07812 192 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 CLEC9AQ6UXN8 241 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 ZNF841Q6ZN19 808 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 LYG1Q8N1E2 194 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 C8orf31Q8N9H6 132 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 ZNF596Q8TC21 504 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 LRRC20Q8TCA0 184 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 TMED6Q8WW62 240 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 CITED4Q96RK1 184 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 SMIM3Q9BZL3 60 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 WFDC1Q9HC57 220 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 PRELID3BQ9Y3B1 194 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 WSB1Q9Y6I7 421 aa9.74□□□□□ -0.85
TRIM40-205ENST00000307859 A0A087X0M5 115 aa9.73□□□□□ -0.85
TRIM40-205ENST00000307859 A0A1B0GX30 115 aa9.73□□□□□ -0.85
TRIM40-205ENST00000307859 MARCH11A6NNE9 402 aa9.73□□□□□ -0.85
TRIM40-205ENST00000307859 FAM90A9PA6NNJ1 464 aa9.73□□□□□ -0.85
TRIM40-205ENST00000307859 GPR37O15354 613 aa9.73□□□□□ -0.85
TRIM40-205ENST00000307859 FGF16O43320 207 aa9.73□□□□□ -0.85
TRIM40-205ENST00000307859 ARHGDIBP52566 201 aa9.73□□□□□ -0.85
TRIM40-205ENST00000307859 TAS2R30P59541 319 aa9.73□□□□□ -0.85
TRIM40-205ENST00000307859 EIF5AL1Q6IS14 154 aaKnown RBP9.73□□□□□ -0.85
TRIM40-205ENST00000307859 H2BFWTQ7Z2G1 175 aa9.73□□□□□ -0.85
TRIM40-205ENST00000307859 R3HDM4Q96D70 268 aa9.73□□□□□ -0.85
TRIM40-205ENST00000307859 RAB39BQ96DA2 213 aa9.73□□□□□ -0.85
TRIM40-205ENST00000307859 S1PR3Q99500 378 aa9.73□□□□□ -0.85
TRIM40-205ENST00000307859 BARX1Q9HBU1 254 aaPredicted RBP9.73□□□□□ -0.85
TRIM40-205ENST00000307859 HSPB7Q9UBY9 170 aa9.73□□□□□ -0.85
TRIM40-205ENST00000307859 DCHS2Q6V1P9 2916 aa9.72□□□□□ -0.85
TRIM40-205ENST00000307859 BORCS7-ASMTA0A0B4J1R7 106 aa9.72□□□□□ -0.85
TRIM40-205ENST00000307859 TXNL1O43396 289 aa9.72□□□□□ -0.85
TRIM40-205ENST00000307859 ERVFRD-1P60508 538 aa9.72□□□□□ -0.85
TRIM40-205ENST00000307859 RPL23AP62750 156 aaKnown RBP9.72□□□□□ -0.85
TRIM40-205ENST00000307859 TNFRSF9Q07011 255 aa9.72□□□□□ -0.85
TRIM40-205ENST00000307859 AARDQ4LEZ3 155 aa9.72□□□□□ -0.85
TRIM40-205ENST00000307859 ZNF833PQ6ZTB9 187 aa9.72□□□□□ -0.85
TRIM40-205ENST00000307859 LINC00311Q8N616 119 aa9.72□□□□□ -0.85
TRIM40-205ENST00000307859 OR4S2Q8NH73 311 aa9.72□□□□□ -0.85
TRIM40-205ENST00000307859 SMIM8Q96KF7 97 aa9.72□□□□□ -0.85
TRIM40-205ENST00000307859 GINS3Q9BRX5 216 aa9.72□□□□□ -0.85
TRIM40-205ENST00000307859 REG4Q9BYZ8 158 aa9.72□□□□□ -0.85
TRIM40-205ENST00000307859 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.72□□□□□ -0.85
TRIM40-205ENST00000307859 A6NNC1 897 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 MED6O75586 246 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 LY6HO94772 140 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 GOSR1O95249 250 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 FAM157CP0CG43 387 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 COX6B1P14854 86 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 AVPI1Q5T686 147 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 FAM71F2Q6NXP2 309 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 C11orf42Q8N5U0 333 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 ZNF383Q8NA42 475 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 C8orf46Q8TAG6 207 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 RNF141Q8WVD5 230 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 RAB1CQ92928 201 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 NEIL1Q96FI4 390 aaPredicted RBP9.71□□□□□ -0.85
TRIM40-205ENST00000307859 TIMD4Q96H15 378 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 MIOXQ9UGB7 285 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 PFDN2Q9UHV9 154 aa9.71□□□□□ -0.85
TRIM40-205ENST00000307859 MFSD2BA6NFX1 497 aa9.71□□□□□ -0.86
TRIM40-205ENST00000307859 IGHV1-8P0DP01 117 aa9.71□□□□□ -0.86
TRIM40-205ENST00000307859 NQO2P16083 231 aa9.71□□□□□ -0.86
TRIM40-205ENST00000307859 UBE2KP61086 200 aa9.71□□□□□ -0.86
TRIM40-205ENST00000307859 ZNF266Q14584 549 aa9.71□□□□□ -0.86
TRIM40-205ENST00000307859 AANATQ16613 207 aa9.71□□□□□ -0.86
TRIM40-205ENST00000307859 STPG2Q8N412 459 aa9.71□□□□□ -0.86
TRIM40-205ENST00000307859 OR8B3Q8NGG8 313 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms