RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 OR51S1Q8NGJ8 323 aa17.77■□□□□ 0.44
HOXD4-201ENST00000306324 ZNF702PQ9H963 129 aa17.77■□□□□ 0.44
HOXD4-201ENST00000306324 SIGLEC9Q9Y336 463 aa17.77■□□□□ 0.44
HOXD4-201ENST00000306324 PLXNB1O43157 2135 aa17.77■□□□□ 0.44
HOXD4-201ENST00000306324 NBR2O15453 112 aa17.76■□□□□ 0.43
HOXD4-201ENST00000306324 CRYZL1O95825 349 aa17.76■□□□□ 0.43
HOXD4-201ENST00000306324 CATR1Q13166 79 aa17.76■□□□□ 0.43
HOXD4-201ENST00000306324 PHLDA2Q53GA4 152 aa17.76■□□□□ 0.43
HOXD4-201ENST00000306324 OR51H1Q8NH63 302 aa17.76■□□□□ 0.43
HOXD4-201ENST00000306324 OR2T6Q8NHC8 308 aa17.76■□□□□ 0.43
HOXD4-201ENST00000306324 LINC01006Q8NI28 216 aa17.76■□□□□ 0.43
HOXD4-201ENST00000306324 PRRT1Q99946 306 aa17.76■□□□□ 0.43
HOXD4-201ENST00000306324 RASL11BQ9BPW5 248 aa17.76■□□□□ 0.43
HOXD4-201ENST00000306324 RSRP1Q9BUV0 290 aa17.76■□□□□ 0.43
HOXD4-201ENST00000306324 BEX1Q9HBH7 125 aa17.76■□□□□ 0.43
HOXD4-201ENST00000306324 KIAA1456Q9P272 454 aa17.76■□□□□ 0.43
HOXD4-201ENST00000306324 TENM1Q9UKZ4 2725 aa17.76■□□□□ 0.43
HOXD4-201ENST00000306324 RLN1P04808 185 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 FAM71E2Q8N5Q1 922 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 HARBI1Q96MB7 349 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 RNF5Q99942 180 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 C16orf95Q9H693 158 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 HRASLSQ9HDD0 168 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 SCP2D1Q9UJQ7 156 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 SHOXO15266 292 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 PGLYRP1O75594 196 aaPredicted RBP17.75■□□□□ 0.43
HOXD4-201ENST00000306324 IL7P13232 177 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 PI3P19957 117 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 S100GP29377 79 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 AWAT1Q58HT5 328 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 IDO2Q6ZQW0 420 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 NPBQ8NG41 125 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 MARCH1Q8TCQ1 289 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 TSNAXQ99598 290 aaKnown RBP17.75■□□□□ 0.43
HOXD4-201ENST00000306324 LIN7CQ9NUP9 197 aaKnown RBP17.75■□□□□ 0.43
HOXD4-201ENST00000306324 STAB1Q9NY15 2570 aa17.75■□□□□ 0.43
HOXD4-201ENST00000306324 LINC00854A0A1B0GVQ3 168 aa17.74■□□□□ 0.43
HOXD4-201ENST00000306324 CLPSL1A2RUU4 121 aa17.74■□□□□ 0.43
HOXD4-201ENST00000306324 PLGLAQ15195 96 aa17.74■□□□□ 0.43
HOXD4-201ENST00000306324 TMEM177Q53S58 311 aa17.74■□□□□ 0.43
HOXD4-201ENST00000306324 MRGPRFQ96AM1 343 aa17.74■□□□□ 0.43
HOXD4-201ENST00000306324 RNF114Q9Y508 228 aa17.74■□□□□ 0.43
HOXD4-201ENST00000306324 RRHO14718 337 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 NDUFA3O95167 84 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 KIR2DS2P43631 304 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 C5orf64Q2M2E5 130 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 TMEM95Q3KNT9 176 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 SPAG16Q8N0X2 631 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 Q8N2B8 174 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 POC5Q8NA72 575 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 OR13C8Q8NGS7 320 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 OR4S2Q8NH73 311 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 ZFAND1Q8TCF1 268 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 DEDD2Q8WXF8 326 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 FBXL15Q9H469 300 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 SLC2A9Q9NRM0 540 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 SLC2A8Q9NY64 477 aa17.73■□□□□ 0.43
HOXD4-201ENST00000306324 A0A1B0GUS0 222 aa17.72■□□□□ 0.43
HOXD4-201ENST00000306324 SLC25A17O43808 307 aa17.72■□□□□ 0.43
HOXD4-201ENST00000306324 ECI1P42126 302 aa17.72■□□□□ 0.43
HOXD4-201ENST00000306324 LGALS7P47929 136 aa17.72■□□□□ 0.43
HOXD4-201ENST00000306324 BRWD1-AS2P59051 145 aa17.72■□□□□ 0.43
HOXD4-201ENST00000306324 PSG5Q15238 335 aa17.72■□□□□ 0.43
HOXD4-201ENST00000306324 OSR1Q8TAX0 266 aaPredicted RBP17.72■□□□□ 0.43
HOXD4-201ENST00000306324 ZNF486Q96H40 463 aaPredicted RBP17.72■□□□□ 0.43
HOXD4-201ENST00000306324 METTL1Q9UBP6 276 aaKnown RBP17.72■□□□□ 0.43
HOXD4-201ENST00000306324 HAX1O00165 279 aa17.71■□□□□ 0.43
HOXD4-201ENST00000306324 RAMP3O60896 148 aa17.71■□□□□ 0.43
HOXD4-201ENST00000306324 VDAC2P45880 294 aaPredicted RBP17.71■□□□□ 0.43
HOXD4-201ENST00000306324 COMPP49747 757 aaPredicted RBP17.71■□□□□ 0.43
HOXD4-201ENST00000306324 ZNF846Q147U1 533 aa17.71■□□□□ 0.43
HOXD4-201ENST00000306324 C12orf54Q6X4T0 127 aa17.71■□□□□ 0.43
HOXD4-201ENST00000306324 TBC1D26Q86UD7 250 aa17.71■□□□□ 0.43
HOXD4-201ENST00000306324 CCDC32Q9BV29 185 aa17.71■□□□□ 0.43
HOXD4-201ENST00000306324 WDR12Q9GZL7 423 aaKnown RBP17.71■□□□□ 0.43
HOXD4-201ENST00000306324 MMP24Q9Y5R2 645 aa17.71■□□□□ 0.43
HOXD4-201ENST00000306324 SRRM4A7MD48 611 aaKnown RBP17.7■□□□□ 0.42
HOXD4-201ENST00000306324 SPDEFO95238 335 aa17.7■□□□□ 0.42
HOXD4-201ENST00000306324 IGLV2-23P01705 113 aa17.7■□□□□ 0.42
HOXD4-201ENST00000306324 PIGPP57054 158 aa17.7■□□□□ 0.42
HOXD4-201ENST00000306324 LIN54Q6MZP7 749 aa17.7■□□□□ 0.42
HOXD4-201ENST00000306324 SERTAD4Q9NUC0 356 aa17.7■□□□□ 0.42
HOXD4-201ENST00000306324 C14orf166Q9Y224 244 aaKnown RBP17.7■□□□□ 0.42
HOXD4-201ENST00000306324 TNCP24821 2201 aa17.7■□□□□ 0.42
HOXD4-201ENST00000306324 CTSDP07339 412 aaPredicted RBP17.69■□□□□ 0.42
HOXD4-201ENST00000306324 F2RP25116 425 aa17.69■□□□□ 0.42
HOXD4-201ENST00000306324 CD40LGP29965 261 aa17.69■□□□□ 0.42
HOXD4-201ENST00000306324 SURF2Q15527 256 aaPredicted RBP17.69■□□□□ 0.42
HOXD4-201ENST00000306324 SLC35E3Q7Z769 313 aa17.69■□□□□ 0.42
HOXD4-201ENST00000306324 CLCC1Q96S66 551 aa17.69■□□□□ 0.42
HOXD4-201ENST00000306324 COPZ2Q9P299 210 aa17.69■□□□□ 0.42
HOXD4-201ENST00000306324 RBFOX2O43251 390 aaKnown RBP eCLIP17.69■□□□□ 0.42
HOXD4-201ENST00000306324 VMA21Q3ZAQ7 101 aa17.69■□□□□ 0.42
HOXD4-201ENST00000306324 CCDC71LQ8N9Z2 235 aa17.69■□□□□ 0.42
HOXD4-201ENST00000306324 CD300LFQ8TDQ1 290 aa17.69■□□□□ 0.42
HOXD4-201ENST00000306324 HSPB9Q9BQS6 159 aa17.69■□□□□ 0.42
HOXD4-201ENST00000306324 TPSG1Q9NRR2 321 aa17.69■□□□□ 0.42
HOXD4-201ENST00000306324 CENPXA8MT69 81 aa17.68■□□□□ 0.42
HOXD4-201ENST00000306324 MPPED1O15442 326 aa17.68■□□□□ 0.42
HOXD4-201ENST00000306324 IGHG2P01859 326 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms