RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 CBLN1P23435 193 aa9.27□□□□□ -0.92
LSM3-201ENST00000306024 PRSS12P56730 875 aa9.27□□□□□ -0.92
LSM3-201ENST00000306024 FFAR4Q5NUL3 377 aa9.27□□□□□ -0.92
LSM3-201ENST00000306024 Q6ZVH6 145 aa9.27□□□□□ -0.92
LSM3-201ENST00000306024 ORAOV1Q8WV07 137 aa9.27□□□□□ -0.92
LSM3-201ENST00000306024 WDYHV1Q96HA8 205 aa9.27□□□□□ -0.92
LSM3-201ENST00000306024 RAB40CQ96S21 281 aa9.27□□□□□ -0.92
LSM3-201ENST00000306024 WNT10AQ9GZT5 417 aa9.27□□□□□ -0.92
LSM3-201ENST00000306024 C11orf94C9JXX5 98 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 ETV2O00321 342 aaPredicted RBP9.27□□□□□ -0.93
LSM3-201ENST00000306024 PAX1P15863 534 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 LMO1P25800 156 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 IER3P46695 156 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 MRPL49Q13405 166 aaKnown RBP9.27□□□□□ -0.93
LSM3-201ENST00000306024 CNN3Q15417 329 aaKnown RBP9.27□□□□□ -0.93
LSM3-201ENST00000306024 PRSS8Q16651 343 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 STPG4Q8N801 248 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 OR2D3Q8NGH3 330 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 RNF2Q99496 336 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 TMEM222Q9H0R3 208 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 VSIRQ9H7M9 311 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 GPR35Q9HC97 309 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 SLC7A10Q9NS82 523 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 SERTAD4Q9NUC0 356 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 RPS16P62249 146 aaKnown RBP9.27□□□□□ -0.93
LSM3-201ENST00000306024 RBX1P62877 108 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 GRB2P62993 217 aaKnown RBP9.27□□□□□ -0.93
LSM3-201ENST00000306024 HLA-DRB5Q30154 266 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 KRTCAP3Q53RY4 240 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 Q6ZS92 163 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 OR10G9Q8NGN4 311 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 OR10G7Q8NGN6 311 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 BCL2L2Q92843 193 aaPredicted RBP9.27□□□□□ -0.93
LSM3-201ENST00000306024 C18orf12Q96KH6 178 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 SPRR3Q9UBC9 169 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 ESPL1Q14674 2120 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 POLEQ07864 2286 aa9.27□□□□□ -0.93
LSM3-201ENST00000306024 SNURFLB1AK76 121 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 HSBP1L1C9JCN9 74 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 ZNF253O75346 499 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 COX5AP20674 150 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 LCN2P80188 198 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 STUMQ69YW2 141 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 MSI2Q96DH6 328 aaKnown RBP9.26□□□□□ -0.93
LSM3-201ENST00000306024 IGKV1D-43A0A0B4J1Z2 117 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 LRP5LA4QPB2 252 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 NPIPB13A6NJU9 1138 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 NPIPB4C9JG80 1138 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 RAB29O14966 203 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 SLC38A11Q08AI6 406 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 GAPTQ8N292 157 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 PP6455Q8WZ26 134 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 CACNG5Q9UF02 275 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 PIGBOS1A0A0B4J2F0 54 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 CLEC18AA5D8T8 446 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 AHRRA9YTQ3 701 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 IGHMP01871 453 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 MGST1P10620 155 aaKnown RBP9.26□□□□□ -0.93
LSM3-201ENST00000306024 ADMP35318 185 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 CDKN1AP38936 164 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 SERF2P84101 59 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 CLEC18CQ8NCF0 446 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 OR4D5Q8NGN0 318 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 MRPL18Q9H0U6 180 aaKnown RBP9.26□□□□□ -0.93
LSM3-201ENST00000306024 NCOR1P1Q9H4R4 102 aa9.26□□□□□ -0.93
LSM3-201ENST00000306024 LYZL6O75951 148 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 ZNF32P17041 273 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 THBS3P49746 956 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 IZUMO4Q1ZYL8 232 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 OR10V1Q8NGI7 309 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 OR10G8Q8NGN5 311 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 PIGCQ92535 297 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 GMPPAQ96IJ6 420 aaPredicted RBP9.25□□□□□ -0.93
LSM3-201ENST00000306024 WASHC3Q9Y3C0 194 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 SHANK1Q9Y566 2161 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 TMEM250H0YL14 139 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 K7EM74 188 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 M0R135 149 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 OR1K1Q8NGR3 316 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 MRGPRDQ8TDS7 321 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 ZNF799Q96GE5 643 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 TAAR6Q96RI8 345 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 ARL2-SNX15V9GYD0 113 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 SYNGR2O43760 224 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 WDR1O75083 606 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 HSBP1O75506 76 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 PLCXD3Q63HM9 321 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 SLC25A47Q6Q0C1 308 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 S100A7AQ86SG5 101 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 OSR2Q8N2R0 312 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 RBMXL3Q8N7X1 1067 aaKnown RBP9.25□□□□□ -0.93
LSM3-201ENST00000306024 IL19Q9UHD0 177 aa9.25□□□□□ -0.93
LSM3-201ENST00000306024 RIPPLY3P57055 190 aa9.24□□□□□ -0.93
LSM3-201ENST00000306024 C1orf185Q5T7R7 199 aa9.24□□□□□ -0.93
LSM3-201ENST00000306024 FREM1Q5H8C1 2179 aa9.24□□□□□ -0.93
LSM3-201ENST00000306024 LILRA1O75019 489 aa9.24□□□□□ -0.93
LSM3-201ENST00000306024 DHRS3O75911 302 aa9.24□□□□□ -0.93
LSM3-201ENST00000306024 NDUFB4O95168 129 aa9.24□□□□□ -0.93
LSM3-201ENST00000306024 APOA2P02652 100 aa9.24□□□□□ -0.93
LSM3-201ENST00000306024 PIGYQ3MUY2 71 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms