RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 GABRA6Q16445 453 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 REC114Q7Z4M0 266 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 C17orf82Q86X59 251 aaPredicted RBP11.3□□□□□ -0.6
DDX54-201ENST00000306014 DDA1Q9BW61 102 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 CBLN4Q9NTU7 201 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 CBY1Q9Y3M2 126 aa11.3□□□□□ -0.6
DDX54-201ENST00000306014 USF1P22415 310 aaPredicted RBP11.29□□□□□ -0.6
DDX54-201ENST00000306014 CRYGSP22914 178 aa11.29□□□□□ -0.6
DDX54-201ENST00000306014 AARDQ4LEZ3 155 aa11.29□□□□□ -0.6
DDX54-201ENST00000306014 GFI1BQ5VTD9 330 aa11.29□□□□□ -0.6
DDX54-201ENST00000306014 VKORC1L1Q8N0U8 176 aa11.29□□□□□ -0.6
DDX54-201ENST00000306014 ZNF525Q8N782 197 aa11.29□□□□□ -0.6
DDX54-201ENST00000306014 FAM216AQ8WUB2 273 aa11.29□□□□□ -0.6
DDX54-201ENST00000306014 SERTM2A0A1B0GWG4 89 aa11.29□□□□□ -0.6
DDX54-201ENST00000306014 NDUFA2O43678 99 aa11.29□□□□□ -0.6
DDX54-201ENST00000306014 TMEM11P17152 192 aa11.29□□□□□ -0.6
DDX54-201ENST00000306014 CHRNB4P30926 498 aa11.29□□□□□ -0.6
DDX54-201ENST00000306014 SSTR5P35346 364 aa11.29□□□□□ -0.6
DDX54-201ENST00000306014 CYP2G1PQ6ZSU1 146 aa11.29□□□□□ -0.6
DDX54-201ENST00000306014 RNF166Q96A37 237 aaPredicted RBP11.29□□□□□ -0.6
DDX54-201ENST00000306014 GMPPAQ96IJ6 420 aaPredicted RBP11.29□□□□□ -0.6
DDX54-201ENST00000306014 FOXD3Q9UJU5 478 aaPredicted RBP11.29□□□□□ -0.6
DDX54-201ENST00000306014 KLK10O43240 276 aa11.29□□□□□ -0.6
DDX54-201ENST00000306014 ADTRPQ96IZ2 230 aa11.29□□□□□ -0.6
DDX54-201ENST00000306014 ODAMA1E959 279 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 J3QR06 171 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 TMPRSS2O15393 492 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 ARL14EPLP0DKL9 152 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 SPCS3P61009 180 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 SCGB2A2Q13296 93 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 OR5I1Q13606 314 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 ZNF355PQ9NSJ1 428 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 WIPI2Q9Y4P8 454 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 WNT9BO14905 357 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 LYL1P12980 280 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 TNFRSF1AP19438 455 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 PTGDSP41222 190 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 ABHD12Q8N2K0 398 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 TMEM105Q8N8V8 129 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 RND1Q92730 232 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 WBP1Q96G27 269 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 WIPF3A6NGB9 483 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 RAB29O14966 203 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 VMA21Q3ZAQ7 101 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 MYO7BQ6PIF6 2116 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 TIPARPQ7Z3E1 657 aaKnown RBP11.28□□□□□ -0.6
DDX54-201ENST00000306014 OR8I2Q8N0Y5 310 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 hADV38S2A0JD32 116 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 K7ESF4 209 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 PRRG2O14669 202 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 MPDU1O75352 247 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 FAM162BQ5T6X4 162 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 CCL17Q92583 94 aa11.28□□□□□ -0.6
DDX54-201ENST00000306014 C1orf147Q96MC9 270 aaPredicted RBP11.28□□□□□ -0.6
DDX54-201ENST00000306014 ZNF407Q9C0G0 2248 aa11.27□□□□□ -0.6
DDX54-201ENST00000306014 TFF3Q07654 80 aa11.27□□□□□ -0.6
DDX54-201ENST00000306014 SIGLEC12Q96PQ1 595 aa11.27□□□□□ -0.6
DDX54-201ENST00000306014 ELOVL1Q9BW60 279 aa11.27□□□□□ -0.6
DDX54-201ENST00000306014 VSIRQ9H7M9 311 aa11.27□□□□□ -0.6
DDX54-201ENST00000306014 DIRC3C9JPN6 131 aa11.27□□□□□ -0.61
DDX54-201ENST00000306014 M0R2Z0 102 aa11.27□□□□□ -0.61
DDX54-201ENST00000306014 RPLP1P05386 114 aaKnown RBP11.27□□□□□ -0.61
DDX54-201ENST00000306014 OR4X1Q8NH49 305 aa11.27□□□□□ -0.61
DDX54-201ENST00000306014 KLF14Q8TD94 323 aaPredicted RBP11.27□□□□□ -0.61
DDX54-201ENST00000306014 TMEM171Q8WVE6 324 aa11.27□□□□□ -0.61
DDX54-201ENST00000306014 NDUFB3O43676 98 aa11.27□□□□□ -0.61
DDX54-201ENST00000306014 RNF224P0DH78 156 aa11.27□□□□□ -0.61
DDX54-201ENST00000306014 HIST1H1BP16401 226 aaKnown RBP11.27□□□□□ -0.61
DDX54-201ENST00000306014 ERVFRD-1P60508 538 aa11.27□□□□□ -0.61
DDX54-201ENST00000306014 VPS25Q9BRG1 176 aa11.27□□□□□ -0.61
DDX54-201ENST00000306014 NPCDR1Q9BY65 106 aa11.27□□□□□ -0.61
DDX54-201ENST00000306014 IL19Q9UHD0 177 aa11.27□□□□□ -0.61
DDX54-201ENST00000306014 ZNF716A6NP11 495 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 CEACAM18A8MTB9 384 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 C12orf77C9JDV5 145 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 M0QZK8 103 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 GGCTO75223 188 aaKnown RBP11.26□□□□□ -0.61
DDX54-201ENST00000306014 CD55P08174 381 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 MOB3BQ86TA1 216 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 LEAP2Q969E1 77 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 HIF1ANQ9NWT6 349 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 PRNDQ9UKY0 176 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 ALPK3Q96L96 1907 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 CSRP1P21291 193 aaKnown RBP11.26□□□□□ -0.61
DDX54-201ENST00000306014 WNT5AP41221 380 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 KIAA1644Q3SXP7 199 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 ZNF600Q6ZNG1 722 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 BHLHA15Q7RTS1 189 aaPredicted RBP11.26□□□□□ -0.61
DDX54-201ENST00000306014 ZNF318Q5VUA4 2279 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 C17orf98A8MV24 154 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 MPV17P39210 176 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 FAM214BQ7L5A3 538 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 TGIF2LXQ8IUE1 241 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 LINC00470Q9BZP3 86 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 MRPL18Q9H0U6 180 aaKnown RBP11.26□□□□□ -0.61
DDX54-201ENST00000306014 LNP1A1A4G5 178 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 MKRN2OSH3BPM6 223 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 MGST3O14880 152 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 BRS3P32247 399 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 PTTG1IPP53801 180 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms