RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 GLIPR1P48060 266 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 ZNF726P1Q15940 193 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 RBMS3Q6XE24 437 aaKnown RBP11.83□□□□□ -0.52
RAB40A-201ENST00000304236 H2BFWTQ7Z2G1 175 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 OR13A1Q8NGR1 328 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 VSIRQ9H7M9 311 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 VAX2Q9UIW0 290 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 GTF3C1Q12789 2109 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 DOPEY1Q5JWR5 2465 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 PRRC2CQ9Y520 2896 aaKnown RBP11.82□□□□□ -0.52
RAB40A-201ENST00000304236 UBE2L5PA0A1B0GUS4 154 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 MAP1LC3B2A6NCE7 125 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 MBD3L4A6NDZ8 208 aaPredicted RBP11.82□□□□□ -0.52
RAB40A-201ENST00000304236 MBD3L3A6NE82 208 aaPredicted RBP11.82□□□□□ -0.52
RAB40A-201ENST00000304236 MBD3L5A6NJ08 208 aaPredicted RBP11.82□□□□□ -0.52
RAB40A-201ENST00000304236 PCP4L1A6NKN8 68 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 ZFP92A6NM28 416 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 NDUFS6O75380 124 aaKnown RBP11.82□□□□□ -0.52
RAB40A-201ENST00000304236 WISP2O76076 250 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 IGHV2-5P01817 119 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 FBP1P09467 338 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 GZMHP20718 246 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 OR8G2PQ6IF36 304 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 MBD3L2Q8NHZ7 208 aaPredicted RBP11.82□□□□□ -0.52
RAB40A-201ENST00000304236 DTD1Q8TEA8 209 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 MAP1LC3BQ9GZQ8 125 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 OPN3Q9H1Y3 402 aaPredicted RBP11.82□□□□□ -0.52
RAB40A-201ENST00000304236 ZNF665Q9H7R5 613 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 SLC39A9Q9NUM3 307 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 FZR1Q9UM11 496 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 SLC25A15Q9Y619 301 aa11.82□□□□□ -0.52
RAB40A-201ENST00000304236 C15orf65H3BRN8 121 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 AP4M1O00189 453 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 CRYABP02511 175 aaKnown RBP11.81□□□□□ -0.52
RAB40A-201ENST00000304236 SMIM6P0DI80 62 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 CFHR2P36980 270 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 RAB11AP62491 216 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 C3orf36Q3SXR2 165 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 OR2B11Q5JQS5 317 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 FAM90A2PQ658T7 463 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 OR10P1Q8NGE3 313 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 SNX22Q96L94 193 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 NOTCH2Q04721 2471 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 UTP20O75691 2785 aaKnown RBP11.81□□□□□ -0.52
RAB40A-201ENST00000304236 FAM90A9PA6NNJ1 464 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 SRRM5B3KS81 715 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 SSTR5P35346 364 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 BRWD1-AS2P59051 145 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 GFRALQ6UXV0 394 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 CD177Q8N6Q3 437 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 CA5BP1Q8WTZ4 195 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 TMEM242Q9NWH2 141 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 JPT1Q9UK76 154 aa11.81□□□□□ -0.52
RAB40A-201ENST00000304236 PMS2P5A8MQ11 134 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 MGST3O14880 152 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 ZNF737O75373 536 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 RPS10P46783 165 aaKnown RBP11.8□□□□□ -0.52
RAB40A-201ENST00000304236 TDGF1P3P51864 188 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 FABP9Q0Z7S8 132 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 ELOBQ15370 118 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 CR1LQ2VPA4 569 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 BTNL3Q6UXE8 466 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 OR2Z1Q8NG97 314 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 LHX4Q969G2 390 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 AGMATQ9BSE5 352 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 CLN8Q9UBY8 286 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 PSG11Q9UQ72 335 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 CACNA1DQ01668 2161 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 UNC79Q9P2D8 2635 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 USF3Q68DE3 2245 aa11.8□□□□□ -0.52
RAB40A-201ENST00000304236 CTXND1A0A1B0GTU2 59 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 A0A1W2PPE3 182 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 ZNF727A8MUV8 499 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 ZG16O60844 167 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 GPR12P47775 334 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 ELLP55199 621 aaPredicted RBP11.79□□□□□ -0.52
RAB40A-201ENST00000304236 OR2B8PP59922 312 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 GNB2P62879 340 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 VWC2Q2TAL6 325 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 Q3ZCU0 254 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 NCOR1P1Q9H4R4 102 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 HEATR1Q9H583 2144 aaKnown RBP11.79□□□□□ -0.52
RAB40A-201ENST00000304236 RAB9BQ9NP90 201 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 INTS1Q8N201 2190 aaKnown RBP11.79□□□□□ -0.52
RAB40A-201ENST00000304236 IGHV3-43A0A0B4J1X8 118 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 LINC00473A8K010 186 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 CEBPZOSA8MTT3 80 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 ST8SIA5O15466 376 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 TGOLN2O43493 480 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 SOX15O60248 233 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 YPEL1O60688 119 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 RBMXL2O75526 392 aaKnown RBP11.79□□□□□ -0.52
RAB40A-201ENST00000304236 HPRT1P00492 218 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 IGHV3-13P01766 116 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 IGHV3-43DP0DP04 118 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 FGF7P21781 194 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 FGF8P55075 233 aaPredicted RBP11.79□□□□□ -0.52
RAB40A-201ENST00000304236 TIMM23BQ5SRD1 257 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 SSX7Q7RTT5 188 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms