RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 IGLV1-36A0A0B4J1U3 117 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 H3BUX3 64 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 TFF1P04155 84 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 AMY1AP04745 511 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 CX3CL1P78423 397 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 IL24Q13007 206 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 Q6ZS92 163 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 MRAPQ8TCY5 172 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 POLEQ07864 2286 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 SIAH2O43255 324 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 KLRD1Q13241 179 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 BAK1Q16611 211 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 FAM209BQ5JX69 171 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 LDLRAD3Q86YD5 345 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 NEU1Q99519 415 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 TUBD1Q9UJT1 453 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 PLXNA1Q9UIW2 1896 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 CBY3A6NI87 242 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 NDUFB6O95139 128 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 NANOS3P60323 173 aaKnown RBP6.04□□□□□ -1.44
RAG1-201ENST00000299440 ZNF415Q09FC8 603 aa6.04□□□□□ -1.44
RAG1-201ENST00000299440 FOXA2Q9Y261 457 aaPredicted RBP6.04□□□□□ -1.44
RAG1-201ENST00000299440 KLF4O43474 513 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 CEACAM4O75871 244 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 KLK2P20151 261 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 EFNB2P52799 333 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 VMO1Q7Z5L0 202 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 OR10Z1Q8NGY1 313 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 NEUROG1Q92886 237 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 SRRQ9GZT4 340 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 ZNF430Q9H8G1 570 aaPredicted RBP6.03□□□□□ -1.44
RAG1-201ENST00000299440 ZNF586Q9NXT0 402 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 TMEM189A5PLL7 270 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 ZNF324O75467 553 aaPredicted RBP6.03□□□□□ -1.44
RAG1-201ENST00000299440 ACAA1P09110 424 aaPredicted RBP6.03□□□□□ -1.44
RAG1-201ENST00000299440 CRISP2P16562 243 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 RPL35AP18077 110 aaKnown RBP6.03□□□□□ -1.44
RAG1-201ENST00000299440 UNC119Q13432 240 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 KLHL30-AS1Q8NEE0 82 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 AQP3Q92482 292 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 LPAR5Q9H1C0 372 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 PPP1R2P9O14990 202 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 PSCAO43653 123 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 IL18BPO95998 194 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 CRYBB2P43320 205 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 SULT1A1P50225 295 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 RIGQ13278 110 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 OR4A47Q6IF82 309 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 LRRC75AQ8NAA5 344 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 NEURL2Q9BR09 285 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 BEX4Q9NWD9 120 aaPredicted RBP6.03□□□□□ -1.44
RAG1-201ENST00000299440 PARP14Q460N5 1801 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 NBASA2RRP1 2371 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 IGKV1D-42A0A075B6H8 117 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 FOXI3A8MTJ6 420 aaPredicted RBP6.03□□□□□ -1.44
RAG1-201ENST00000299440 C11orf94C9JXX5 98 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 RNASE1P07998 156 aaKnown RBP6.03□□□□□ -1.44
RAG1-201ENST00000299440 DLX6P56179 175 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 ZNF429Q86V71 674 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 CRIPAKQ8N1N5 446 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 U3KQ87 197 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 SCN5AQ14524 2016 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 IGLV3-12A0A075B6K2 115 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 A6NNC1 897 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 BCL2L11O43521 198 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 CD99P14209 185 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 ERVK11-1P61568 191 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 SUMO1P63165 101 aaKnown RBP6.03□□□□□ -1.44
RAG1-201ENST00000299440 PRSS54Q6PEW0 395 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 LRP11Q86VZ4 500 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 SLC7A5P1Q8MH63 180 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 OR2D3Q8NGH3 330 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 GLMPQ8WWB7 406 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 VGLL1Q99990 258 aa6.03□□□□□ -1.44
RAG1-201ENST00000299440 MRPL20Q9BYC9 149 aaKnown RBP6.03□□□□□ -1.44
RAG1-201ENST00000299440 J3QW42 95 aa6.02□□□□□ -1.44
RAG1-201ENST00000299440 SRSF10O75494 262 aaKnown RBP6.02□□□□□ -1.44
RAG1-201ENST00000299440 HERPUD1Q15011 391 aa6.02□□□□□ -1.44
RAG1-201ENST00000299440 C10orf128Q5T292 105 aa6.02□□□□□ -1.44
RAG1-201ENST00000299440 WDR25Q64LD2 544 aaPredicted RBP6.02□□□□□ -1.44
RAG1-201ENST00000299440 OR5AU1Q8NGC0 362 aa6.02□□□□□ -1.44
RAG1-201ENST00000299440 TMPRSS5Q9H3S3 457 aa6.02□□□□□ -1.44
RAG1-201ENST00000299440 TRAPPC1Q9Y5R8 145 aa6.02□□□□□ -1.44
RAG1-201ENST00000299440 DSPPQ9NZW4 1301 aa6.02□□□□□ -1.45
RAG1-201ENST00000299440 LOC389332A0A1B0GUA5 103 aa6.02□□□□□ -1.45
RAG1-201ENST00000299440 HKR1P10072 659 aa6.02□□□□□ -1.45
RAG1-201ENST00000299440 SSX1Q16384 188 aa6.02□□□□□ -1.45
RAG1-201ENST00000299440 CR1LQ2VPA4 569 aa6.02□□□□□ -1.45
RAG1-201ENST00000299440 TMEM255AQ5JRV8 349 aa6.02□□□□□ -1.45
RAG1-201ENST00000299440 NPVFQ9HCQ7 196 aa6.02□□□□□ -1.45
RAG1-201ENST00000299440 SNRNP200O75643 2136 aaKnown RBP6.02□□□□□ -1.45
RAG1-201ENST00000299440 SPTAN1Q13813 2472 aaKnown RBP6.02□□□□□ -1.45
RAG1-201ENST00000299440 RAB19A4D1S5 217 aa6.02□□□□□ -1.45
RAG1-201ENST00000299440 AP4M1O00189 453 aa6.02□□□□□ -1.45
RAG1-201ENST00000299440 NPFFO15130 113 aa6.02□□□□□ -1.45
RAG1-201ENST00000299440 CST4P01036 141 aa6.02□□□□□ -1.45
RAG1-201ENST00000299440 MYOD1P15172 320 aa6.02□□□□□ -1.45
RAG1-201ENST00000299440 FGF9P31371 208 aaPredicted RBP6.02□□□□□ -1.45
RAG1-201ENST00000299440 SCAND1P57086 179 aa6.02□□□□□ -1.45
RAG1-201ENST00000299440 LCNL1Q6ZST4 164 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms