RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 UQCC1Q9NVA1 299 aa17.58■□□□□ 0.41
SOX17-201ENST00000297316 H7C2Y5 167 aa17.58■□□□□ 0.4
SOX17-201ENST00000297316 TXNL1O43396 289 aa17.58■□□□□ 0.4
SOX17-201ENST00000297316 C1QL1O75973 258 aa17.58■□□□□ 0.4
SOX17-201ENST00000297316 Q6ZRG5 221 aa17.58■□□□□ 0.4
SOX17-201ENST00000297316 SEC11BP0C7V7 166 aa17.57■□□□□ 0.4
SOX17-201ENST00000297316 NFYBP25208 207 aa17.57■□□□□ 0.4
SOX17-201ENST00000297316 DUTP33316 252 aaKnown RBP17.57■□□□□ 0.4
SOX17-201ENST00000297316 FHITP49789 147 aa17.57■□□□□ 0.4
SOX17-201ENST00000297316 MIDNQ504T8 468 aa17.57■□□□□ 0.4
SOX17-201ENST00000297316 HSD17B10Q99714 261 aaKnown RBP17.57■□□□□ 0.4
SOX17-201ENST00000297316 FAM96BQ9Y3D0 163 aa17.57■□□□□ 0.4
SOX17-201ENST00000297316 PRAMEF5Q5TYX0 476 aa17.56■□□□□ 0.4
SOX17-201ENST00000297316 BTNL8Q6UX41 500 aa17.56■□□□□ 0.4
SOX17-201ENST00000297316 RAB40CQ96S21 281 aa17.56■□□□□ 0.4
SOX17-201ENST00000297316 SEC11CQ9BY50 192 aa17.56■□□□□ 0.4
SOX17-201ENST00000297316 SAV1Q9H4B6 383 aaPredicted RBP17.56■□□□□ 0.4
SOX17-201ENST00000297316 GFOD1Q9NXC2 390 aa17.56■□□□□ 0.4
SOX17-201ENST00000297316 USP9XQ93008 2570 aaPredicted RBP17.56■□□□□ 0.4
SOX17-201ENST00000297316 DVL1O14640 695 aa17.56■□□□□ 0.4
SOX17-201ENST00000297316 AGAP20933 346 aa17.56■□□□□ 0.4
SOX17-201ENST00000297316 C11orf71Q6IPW1 123 aa17.56■□□□□ 0.4
SOX17-201ENST00000297316 H1FXQ92522 213 aaKnown RBP17.56■□□□□ 0.4
SOX17-201ENST00000297316 CBLN4Q9NTU7 201 aa17.56■□□□□ 0.4
SOX17-201ENST00000297316 CCL3L1P16619 93 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 NPBWR1P48145 328 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 PPOXP50336 477 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 RPL31P62899 125 aaKnown RBP17.55■□□□□ 0.4
SOX17-201ENST00000297316 BAXQ07812 192 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 CT45A1Q5HYN5 189 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 DHRS7BQ6IAN0 325 aaPredicted RBP17.55■□□□□ 0.4
SOX17-201ENST00000297316 CT45A3Q8NHU0 189 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 RBMXL1Q96E39 390 aaKnown RBP17.55■□□□□ 0.4
SOX17-201ENST00000297316 TACC2O95359 2948 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 M0R1X1 148 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 SNAPINO95295 136 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 ATP6V0CP27449 155 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 RPL23AP62750 156 aaKnown RBP17.55■□□□□ 0.4
SOX17-201ENST00000297316 ARL16Q0P5N6 197 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 AVPI1Q5T686 147 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 HAPLN4Q86UW8 402 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 PARP11Q9NR21 331 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 FAM212BQ9NTI7 297 aaPredicted RBP17.55■□□□□ 0.4
SOX17-201ENST00000297316 COA4Q9NYJ1 87 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 LAMP3Q9UQV4 416 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 WSB1Q9Y6I7 421 aa17.55■□□□□ 0.4
SOX17-201ENST00000297316 DANCRP0C864 163 aa17.54■□□□□ 0.4
SOX17-201ENST00000297316 RNF224P0DH78 156 aa17.54■□□□□ 0.4
SOX17-201ENST00000297316 PSENENQ9NZ42 101 aa17.54■□□□□ 0.4
SOX17-201ENST00000297316 ZNRD1Q9P1U0 126 aa17.54■□□□□ 0.4
SOX17-201ENST00000297316 NDUFB3O43676 98 aa17.54■□□□□ 0.4
SOX17-201ENST00000297316 ZNF266Q14584 549 aa17.54■□□□□ 0.4
SOX17-201ENST00000297316 TMEM200BQ69YZ2 307 aa17.54■□□□□ 0.4
SOX17-201ENST00000297316 TMEM182Q6ZP80 229 aaPredicted RBP17.54■□□□□ 0.4
SOX17-201ENST00000297316 CORO2AQ92828 525 aa17.54■□□□□ 0.4
SOX17-201ENST00000297316 ABHD14AQ9BUJ0 271 aa17.54■□□□□ 0.4
SOX17-201ENST00000297316 RBKSQ9H477 322 aa17.54■□□□□ 0.4
SOX17-201ENST00000297316 CACFD1Q9UGQ2 172 aa17.54■□□□□ 0.4
SOX17-201ENST00000297316 MLXQ9UH92 298 aa17.54■□□□□ 0.4
SOX17-201ENST00000297316 hADV38S2A0JD32 116 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 AGPAT2O15120 278 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 FCGR3BO75015 233 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 GNG10P50151 68 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 SULT1A1P50225 295 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 RUNX1Q01196 453 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 TNFRSF9Q07011 255 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 LINC00518Q8N0U6 118 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 IDI2-AS1Q9NZ38 188 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 ZNF462Q96JM2 2506 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 MYO18BQ8IUG5 2567 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 MALRD1Q5VYJ5 2156 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 ZNF729A6NN14 1252 aaPredicted RBP17.53■□□□□ 0.4
SOX17-201ENST00000297316 METTL15P1P0C7V9 234 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 UBE2KP61086 200 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 ZNF439Q8NDP4 499 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 HSPB7Q9UBY9 170 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 LINC00312Q9Y6C7 94 aa17.53■□□□□ 0.4
SOX17-201ENST00000297316 LRRC10Q5BKY1 277 aa17.52■□□□□ 0.4
SOX17-201ENST00000297316 STX12Q86Y82 276 aa17.52■□□□□ 0.4
SOX17-201ENST00000297316 TCTEX1D1Q8N7M0 179 aa17.52■□□□□ 0.4
SOX17-201ENST00000297316 UTP20O75691 2785 aaKnown RBP17.52■□□□□ 0.39
SOX17-201ENST00000297316 MARCH11A6NNE9 402 aa17.52■□□□□ 0.39
SOX17-201ENST00000297316 LYPD6BQ8NI32 183 aa17.52■□□□□ 0.39
SOX17-201ENST00000297316 ATP5SQ99766 215 aa17.52■□□□□ 0.39
SOX17-201ENST00000297316 SAA2-SAA4A0A096LPE2 208 aa17.51■□□□□ 0.39
SOX17-201ENST00000297316 RAB29O14966 203 aa17.51■□□□□ 0.39
SOX17-201ENST00000297316 SAA2P0DJI9 122 aaPredicted RBP17.51■□□□□ 0.39
SOX17-201ENST00000297316 ZNF251Q9BRH9 671 aa17.51■□□□□ 0.39
SOX17-201ENST00000297316 RAB1BQ9H0U4 201 aa17.51■□□□□ 0.39
SOX17-201ENST00000297316 LINC00574Q9H8X3 128 aa17.51■□□□□ 0.39
SOX17-201ENST00000297316 UBTD1Q9HAC8 227 aa17.51■□□□□ 0.39
SOX17-201ENST00000297316 KAAG1Q9UBP8 84 aa17.51■□□□□ 0.39
SOX17-201ENST00000297316 ASH1LQ9NR48 2969 aaKnown RBP17.51■□□□□ 0.39
SOX17-201ENST00000297316 ARHGAP32A7KAX9 2087 aa17.51■□□□□ 0.39
SOX17-201ENST00000297316 FAM90A26D6RGX4 464 aa17.5■□□□□ 0.39
SOX17-201ENST00000297316 RNASEK-C17orf49H0YIS7 233 aa17.5■□□□□ 0.39
SOX17-201ENST00000297316 IGFBP2P18065 325 aa17.5■□□□□ 0.39
SOX17-201ENST00000297316 SPANXN5Q5MJ07 72 aa17.5■□□□□ 0.39
SOX17-201ENST00000297316 H2BFWTQ7Z2G1 175 aa17.5■□□□□ 0.39
SOX17-201ENST00000297316 ZDHHC16Q969W1 377 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms