RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 A8MXE2 369 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 GZMHP20718 246 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 PAX9P55771 341 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 TNFRSF9Q07011 255 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 PINX1Q96BK5 328 aaKnown RBP7.75□□□□□ -1.17
PRDM9-201ENST00000296682 Q9UFV3 132 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 TRAV3A0A0B4J244 114 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 C1orf196B1AJZ1 125 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 NPIPB11E5RHQ5 1161 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 PITX3O75364 302 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 LY6HO94772 140 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 OR2C1O95371 312 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 FFAR4Q5NUL3 377 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 AVPI1Q5T686 147 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 ZNF429Q86V71 674 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 FAM90A1Q86YD7 464 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 GINS3Q9BRX5 216 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 NIPSNAP3BQ9BS92 247 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 CALYQ9NYX4 217 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 CARHSP1Q9Y2V2 147 aaKnown RBP7.75□□□□□ -1.17
PRDM9-201ENST00000296682 RAXQ9Y2V3 346 aa7.75□□□□□ -1.17
PRDM9-201ENST00000296682 SMG1Q96Q15 3661 aaKnown RBP7.75□□□□□ -1.17
PRDM9-201ENST00000296682 MGST3O14880 152 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 SCAF4O95104 1147 aaKnown RBP7.74□□□□□ -1.17
PRDM9-201ENST00000296682 COX5AP20674 150 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 TAS2R30P59541 319 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 SNRPEP62304 92 aaKnown RBP7.74□□□□□ -1.17
PRDM9-201ENST00000296682 SLC35E4Q6ICL7 350 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 RHOVQ96L33 236 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 SCRT1Q9BWW7 348 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 PTPRBP23467 1997 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 ARHGAP32A7KAX9 2087 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 MAP1LC3B2A6NCE7 125 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 OR8U8P0C7N1 319 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 MMP9P14780 707 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 CASP6P55212 293 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 GCSAMLQ5JQS6 135 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 ZNF343Q6P1L6 599 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 OR4F5Q8NH21 305 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 OR4F4Q96R69 305 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 MAP1LC3BQ9GZQ8 125 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 TOLLIPQ9H0E2 274 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 IGHV1-46P01743 117 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 CTRB1P17538 263 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 PAX6P26367 422 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 RPS23P62266 143 aaKnown RBP7.74□□□□□ -1.17
PRDM9-201ENST00000296682 RPL31P62899 125 aaKnown RBP7.74□□□□□ -1.17
PRDM9-201ENST00000296682 TFF3Q07654 80 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 CTRB2Q6GPI1 263 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 KDF1Q8NAX2 398 aaPredicted RBP7.74□□□□□ -1.17
PRDM9-201ENST00000296682 FAM57AQ8TBR7 257 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 FAM122AQ96E09 287 aa7.74□□□□□ -1.17
PRDM9-201ENST00000296682 SPENQ96T58 3664 aaKnown RBP7.74□□□□□ -1.17
PRDM9-201ENST00000296682 TRAV38-1A0A0B4J264 116 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 MBD3L4A6NDZ8 208 aaPredicted RBP7.73□□□□□ -1.17
PRDM9-201ENST00000296682 MBD3L3A6NE82 208 aaPredicted RBP7.73□□□□□ -1.17
PRDM9-201ENST00000296682 MBD3L5A6NJ08 208 aaPredicted RBP7.73□□□□□ -1.17
PRDM9-201ENST00000296682 LRRC30A6NM36 301 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 H3BQ15 152 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 SLC25A6P12236 298 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 RAB5CP51148 216 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 ZNF134P52741 427 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 IGFL2Q6UWQ7 119 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 OR10X1Q8NGY0 326 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 MBD3L2Q8NHZ7 208 aaPredicted RBP7.73□□□□□ -1.17
PRDM9-201ENST00000296682 GCM1Q9NP62 436 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 IGHV3-21A0A0B4J1V1 117 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 MMP23AO75900 390 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 IGLV2-14P01704 120 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 RAB5BP61020 215 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 RBPJQ06330 500 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 HMGN3Q15651 99 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 OR10G4Q8NGN3 311 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 OR10G9Q8NGN4 311 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 OR10G7Q8NGN6 311 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 GATAD1Q8WUU5 269 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 CREBBPQ92793 2442 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 DPRXA6NFQ7 191 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 OR9G9P0C7N8 305 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 HOXB1P14653 301 aaPredicted RBP7.73□□□□□ -1.17
PRDM9-201ENST00000296682 COX7A1P24310 79 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 COL8A2P25067 703 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 PAX5Q02548 391 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 KRTCAP3Q53RY4 240 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 C1orf162Q8NEQ5 155 aaPredicted RBP7.73□□□□□ -1.17
PRDM9-201ENST00000296682 SNX22Q96L94 193 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 CENPEQ02224 2701 aa7.73□□□□□ -1.17
PRDM9-201ENST00000296682 A0A1B0GW64 132 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 CCL21O00585 134 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 CGAP01215 116 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 NQO2P16083 231 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 MORN2Q502X0 79 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 CABLES2Q9BTV7 478 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 EGLN1Q9GZT9 426 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 SEBOXQ9HB31 216 aaPredicted RBP7.72□□□□□ -1.17
PRDM9-201ENST00000296682 MBNL3Q9NUK0 354 aaKnown RBP7.72□□□□□ -1.17
PRDM9-201ENST00000296682 OR6C3Q9NZP0 311 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 SRRM5B3KS81 715 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 GFRA3O60609 400 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 ZNF737O75373 536 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms