RNA–Protein interactions for RNA: ENST00000295718.6

PTPRN-201, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRN, Length 3,784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-201ENST00000295718 PLPPR1Q8TBJ4 325 aa12.26□□□□□ -0.45
PTPRN-201ENST00000295718 S1PR3Q99500 378 aa12.26□□□□□ -0.45
PTPRN-201ENST00000295718 MRPL18Q9H0U6 180 aaKnown RBP12.26□□□□□ -0.45
PTPRN-201ENST00000295718 DEPPQ9NTK1 212 aa12.26□□□□□ -0.45
PTPRN-201ENST00000295718 OR6C3Q9NZP0 311 aa12.26□□□□□ -0.45
PTPRN-201ENST00000295718 TNFSF10P50591 281 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 OR1C1Q15619 314 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 CELSR3Q9NYQ7 3312 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 TRBV24-1A0A075B6N3 115 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 LAMTOR5O43504 91 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 IGKV1-5P01602 117 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 HBZP02008 142 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 GNG4P50150 75 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 HLA-DRB5Q30154 266 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 FAM19A2Q8N3H0 131 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 ABCA4P78363 2273 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 ACACAQ13085 2346 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 SCO2A0A1W2PP80 73 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 J3QT63 122 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 OR5G3P0C626 314 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 DOLPP1Q86YN1 238 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 SPEM1Q8N4L4 309 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 VPS25Q9BRG1 176 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 TTC28Q96AY4 2481 aa12.25□□□□□ -0.45
PTPRN-201ENST00000295718 TRAV24A0A0B4J272 114 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 OR5B21A6NL26 309 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 A8MWP6 167 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 COX6A1P12074 109 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 Q56UQ5 140 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 CISD2Q8N5K1 135 aaKnown RBP12.24□□□□□ -0.45
PTPRN-201ENST00000295718 FADS6Q8N9I5 356 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 STRADBQ9C0K7 418 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 SELENOKQ9Y6D0 94 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 C20orf202A1L168 122 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 SLC25A53Q5H9E4 307 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 SLC25A40Q8TBP6 338 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 VPS13AQ96RL7 3174 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 ARFGEF3Q5TH69 2177 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 IGKV1D-33P01593 117 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 IGKV1-33P01594 117 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 NUTF2P61970 127 aaKnown RBP12.24□□□□□ -0.45
PTPRN-201ENST00000295718 OR8G5Q8NG78 346 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 SSBP3Q9BWW4 388 aaPredicted RBP12.24□□□□□ -0.45
PTPRN-201ENST00000295718 SNHG12Q9BXW3 62 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 NPCDR1Q9BY65 106 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 PLSCR2Q9NRY7 297 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 TECRQ9NZ01 308 aaKnown RBP12.24□□□□□ -0.45
PTPRN-201ENST00000295718 PXMP4Q9Y6I8 212 aa12.24□□□□□ -0.45
PTPRN-201ENST00000295718 SERF1AO75920 110 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 APOA2P02652 100 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 PRB4P10163 310 aaPredicted RBP12.23□□□□□ -0.45
PTPRN-201ENST00000295718 C6orf15Q6UXA7 325 aaPredicted RBP12.23□□□□□ -0.45
PTPRN-201ENST00000295718 CARFQ8N187 725 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 LYG1Q8N1E2 194 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 OR2Z1Q8NG97 314 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 LOXL2Q9Y4K0 774 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 IGHV3OR15-7A0A075B7D8 119 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 ADMP35318 185 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 HIST3H3Q16695 136 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 SCCPDHQ8NBX0 429 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 OR5B3Q8NH48 314 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 TMEM68Q96MH6 324 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 UBE2ZQ9H832 354 aaPredicted RBP12.23□□□□□ -0.45
PTPRN-201ENST00000295718 FOXJ2Q9P0K8 574 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 TCFL5Q9UL49 500 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 MPC1Q9Y5U8 109 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 IRF2P14316 349 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 TRAT1Q6PIZ9 186 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 TMEM170AQ8WVE7 144 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 SFRP2Q96HF1 295 aa12.23□□□□□ -0.45
PTPRN-201ENST00000295718 APELAP0DMC3 54 aa12.22□□□□□ -0.45
PTPRN-201ENST00000295718 OR5R1Q8NH85 324 aa12.22□□□□□ -0.45
PTPRN-201ENST00000295718 AP1S3Q96PC3 154 aa12.22□□□□□ -0.45
PTPRN-201ENST00000295718 TAAR6Q96RI8 345 aa12.22□□□□□ -0.45
PTPRN-201ENST00000295718 TRIB1Q96RU8 372 aa12.22□□□□□ -0.45
PTPRN-201ENST00000295718 PSMG3Q9BT73 122 aaPredicted RBP12.22□□□□□ -0.45
PTPRN-201ENST00000295718 QTRT1Q9BXR0 403 aaKnown RBP12.22□□□□□ -0.45
PTPRN-201ENST00000295718 TMEM250H0YL14 139 aa12.22□□□□□ -0.45
PTPRN-201ENST00000295718 IGHEP01854 428 aa12.22□□□□□ -0.45
PTPRN-201ENST00000295718 RPL31P62899 125 aaKnown RBP12.22□□□□□ -0.45
PTPRN-201ENST00000295718 ATP6V1FQ16864 119 aa12.22□□□□□ -0.45
PTPRN-201ENST00000295718 RPEL1Q2QD12 228 aa12.22□□□□□ -0.45
PTPRN-201ENST00000295718 ARSJQ5FYB0 599 aaPredicted RBP12.22□□□□□ -0.45
PTPRN-201ENST00000295718 PPP1R35Q8TAP8 253 aa12.22□□□□□ -0.45
PTPRN-201ENST00000295718 MRPL37Q9BZE1 423 aaKnown RBP12.22□□□□□ -0.45
PTPRN-201ENST00000295718 FOXI3A8MTJ6 420 aaPredicted RBP12.22□□□□□ -0.45
PTPRN-201ENST00000295718 PLAUP00749 431 aa12.22□□□□□ -0.45
PTPRN-201ENST00000295718 GATA2P23769 480 aaPredicted RBP12.22□□□□□ -0.45
PTPRN-201ENST00000295718 CRYBB3P26998 211 aa12.22□□□□□ -0.45
PTPRN-201ENST00000295718 REPIN1Q9BWE0 567 aaKnown RBP12.22□□□□□ -0.45
PTPRN-201ENST00000295718 SCRT1Q9BWW7 348 aa12.22□□□□□ -0.45
PTPRN-201ENST00000295718 SEMA5BQ9P283 1151 aa12.22□□□□□ -0.45
PTPRN-201ENST00000295718 LRRC30A6NM36 301 aa12.21□□□□□ -0.45
PTPRN-201ENST00000295718 MARCH11A6NNE9 402 aa12.21□□□□□ -0.45
PTPRN-201ENST00000295718 UMODP07911 640 aa12.21□□□□□ -0.45
PTPRN-201ENST00000295718 IL11RAQ14626 422 aa12.21□□□□□ -0.45
PTPRN-201ENST00000295718 SPATA45Q537H7 98 aa12.21□□□□□ -0.45
PTPRN-201ENST00000295718 PQLC2Q6ZP29 291 aa12.21□□□□□ -0.45
PTPRN-201ENST00000295718 MAFAQ8NHW3 353 aaPredicted RBP12.21□□□□□ -0.45
PTPRN-201ENST00000295718 CSN3P07498 182 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms