RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 TMEM177Q53S58 311 aa18.01■□□□□ 0.47
LINC01116-201ENST00000295549 NPBQ8NG41 125 aa18.01■□□□□ 0.47
LINC01116-201ENST00000295549 SLC25A21Q9BQT8 299 aaPredicted RBP18.01■□□□□ 0.47
LINC01116-201ENST00000295549 RBFOX2O43251 390 aaKnown RBP eCLIP18■□□□□ 0.47
LINC01116-201ENST00000295549 FCGR3BO75015 233 aa18■□□□□ 0.47
LINC01116-201ENST00000295549 RLN1P04808 185 aa18■□□□□ 0.47
LINC01116-201ENST00000295549 PI3P19957 117 aa18■□□□□ 0.47
LINC01116-201ENST00000295549 LGALS7P47929 136 aa18■□□□□ 0.47
LINC01116-201ENST00000295549 PIGPP57054 158 aa18■□□□□ 0.47
LINC01116-201ENST00000295549 RPS16P62249 146 aaKnown RBP18■□□□□ 0.47
LINC01116-201ENST00000295549 C11orf88Q6PI97 169 aa18■□□□□ 0.47
LINC01116-201ENST00000295549 TCTEX1D1Q8N7M0 179 aa18■□□□□ 0.47
LINC01116-201ENST00000295549 POC5Q8NA72 575 aa18■□□□□ 0.47
LINC01116-201ENST00000295549 OR51H1Q8NH63 302 aa18■□□□□ 0.47
LINC01116-201ENST00000295549 CD300LFQ8TDQ1 290 aa18■□□□□ 0.47
LINC01116-201ENST00000295549 RTBDNQ9BSG5 229 aaPredicted RBP18■□□□□ 0.47
LINC01116-201ENST00000295549 NPFFR1Q9GZQ6 430 aa18■□□□□ 0.47
LINC01116-201ENST00000295549 C5orf66Q9H5L9 145 aa18■□□□□ 0.47
LINC01116-201ENST00000295549 C14orf166Q9Y224 244 aaKnown RBP18■□□□□ 0.47
LINC01116-201ENST00000295549 NCBP2LA6PVI3 153 aaKnown RBP17.99■□□□□ 0.47
LINC01116-201ENST00000295549 MPPED1O15442 326 aa17.99■□□□□ 0.47
LINC01116-201ENST00000295549 LYRM1O43325 122 aa17.99■□□□□ 0.47
LINC01116-201ENST00000295549 AMY1AP04745 511 aa17.99■□□□□ 0.47
LINC01116-201ENST00000295549 F2RP25116 425 aa17.99■□□□□ 0.47
LINC01116-201ENST00000295549 MMDQ15546 238 aa17.99■□□□□ 0.47
LINC01116-201ENST00000295549 TBC1D26Q86UD7 250 aa17.99■□□□□ 0.47
LINC01116-201ENST00000295549 SPAG16Q8N0X2 631 aa17.99■□□□□ 0.47
LINC01116-201ENST00000295549 C5orf56Q8N8D9 126 aa17.99■□□□□ 0.47
LINC01116-201ENST00000295549 OR4S2Q8NH73 311 aa17.99■□□□□ 0.47
LINC01116-201ENST00000295549 OSR1Q8TAX0 266 aaPredicted RBP17.99■□□□□ 0.47
LINC01116-201ENST00000295549 TSNAXQ99598 290 aaKnown RBP17.99■□□□□ 0.47
LINC01116-201ENST00000295549 RANBP3Q9H6Z4 567 aaPredicted RBP17.99■□□□□ 0.47
LINC01116-201ENST00000295549 CRYZL1O95825 349 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 BTCP35070 178 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 RBMS2Q15434 407 aaKnown RBP17.98■□□□□ 0.47
LINC01116-201ENST00000295549 OR2B11Q5JQS5 317 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 FAM71E2Q8N5Q1 922 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 LIN7CQ9NUP9 197 aaKnown RBP17.98■□□□□ 0.47
LINC01116-201ENST00000295549 COPZ2Q9P299 210 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 VSIG4Q9Y279 399 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 NBR2O15453 112 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 RAMP3O60896 148 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 TSPAN9O75954 239 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 NDUFA3O95167 84 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 SPDEFO95238 335 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 CNTFRP26992 372 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 IFITM3Q01628 133 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 KRTAP24-1Q3LI83 254 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 Q8N9W7 124 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 CCDC71LQ8N9Z2 235 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 TSC22D3Q99576 134 aa17.98■□□□□ 0.47
LINC01116-201ENST00000295549 FAM212BQ9NTI7 297 aaPredicted RBP17.98■□□□□ 0.47
LINC01116-201ENST00000295549 SHOXO15266 292 aa17.97■□□□□ 0.47
LINC01116-201ENST00000295549 NDUFA7O95182 113 aa17.97■□□□□ 0.47
LINC01116-201ENST00000295549 HKR1P10072 659 aa17.97■□□□□ 0.47
LINC01116-201ENST00000295549 CCR6P51684 374 aa17.97■□□□□ 0.47
LINC01116-201ENST00000295549 BLCAPP62952 87 aa17.97■□□□□ 0.47
LINC01116-201ENST00000295549 RELBQ01201 579 aa17.97■□□□□ 0.47
LINC01116-201ENST00000295549 ASAH1Q13510 395 aa17.97■□□□□ 0.47
LINC01116-201ENST00000295549 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.97■□□□□ 0.47
LINC01116-201ENST00000295549 HARBI1Q96MB7 349 aa17.97■□□□□ 0.47
LINC01116-201ENST00000295549 KIAA1456Q9P272 454 aa17.97■□□□□ 0.47
LINC01116-201ENST00000295549 TBC1D24Q9ULP9 559 aa17.97■□□□□ 0.47
LINC01116-201ENST00000295549 SRRM4A7MD48 611 aaKnown RBP17.96■□□□□ 0.47
LINC01116-201ENST00000295549 RRHO14718 337 aa17.96■□□□□ 0.47
LINC01116-201ENST00000295549 PEX14O75381 377 aa17.96■□□□□ 0.47
LINC01116-201ENST00000295549 IGLV2-23P01705 113 aa17.96■□□□□ 0.47
LINC01116-201ENST00000295549 PSG5Q15238 335 aa17.96■□□□□ 0.47
LINC01116-201ENST00000295549 Q6ZSV7 163 aa17.96■□□□□ 0.47
LINC01116-201ENST00000295549 Q8N2B8 174 aa17.96■□□□□ 0.47
LINC01116-201ENST00000295549 TMEM158Q8WZ71 300 aa17.96■□□□□ 0.47
LINC01116-201ENST00000295549 PRSS22Q9GZN4 317 aa17.96■□□□□ 0.47
LINC01116-201ENST00000295549 B3GALNT1O75752 331 aa17.95■□□□□ 0.46
LINC01116-201ENST00000295549 NDUFB6O95139 128 aa17.95■□□□□ 0.46
LINC01116-201ENST00000295549 HPRT1P00492 218 aa17.95■□□□□ 0.46
LINC01116-201ENST00000295549 VSIG10L2P0DP72 767 aa17.95■□□□□ 0.46
LINC01116-201ENST00000295549 C5orf64Q2M2E5 130 aa17.95■□□□□ 0.46
LINC01116-201ENST00000295549 RASL11BQ9BPW5 248 aa17.95■□□□□ 0.46
LINC01116-201ENST00000295549 PLEKHA2Q9HB19 425 aa17.95■□□□□ 0.46
LINC01116-201ENST00000295549 SLC6A1P30531 599 aa17.94■□□□□ 0.46
LINC01116-201ENST00000295549 ZNF585BQ52M93 769 aa17.94■□□□□ 0.46
LINC01116-201ENST00000295549 TAF15Q92804 592 aaKnown RBP eCLIP17.94■□□□□ 0.46
LINC01116-201ENST00000295549 AIFM2Q9BRQ8 373 aa17.94■□□□□ 0.46
LINC01116-201ENST00000295549 C16orf95Q9H693 158 aa17.94■□□□□ 0.46
LINC01116-201ENST00000295549 ZNF702PQ9H963 129 aa17.94■□□□□ 0.46
LINC01116-201ENST00000295549 FBN1P35555 2871 aaKnown RBP17.94■□□□□ 0.46
LINC01116-201ENST00000295549 C3orf85A0A1B0GTC6 90 aa17.93■□□□□ 0.46
LINC01116-201ENST00000295549 H0Y980 276 aa17.93■□□□□ 0.46
LINC01116-201ENST00000295549 RAG2P55895 527 aa17.93■□□□□ 0.46
LINC01116-201ENST00000295549 TAS2R31P59538 309 aa17.93■□□□□ 0.46
LINC01116-201ENST00000295549 UBE2KP61086 200 aa17.93■□□□□ 0.46
LINC01116-201ENST00000295549 MZT2BQ6NZ67 158 aa17.93■□□□□ 0.46
LINC01116-201ENST00000295549 ADAD2Q8NCV1 583 aaKnown RBP17.93■□□□□ 0.46
LINC01116-201ENST00000295549 COMMD9Q9P000 198 aa17.93■□□□□ 0.46
LINC01116-201ENST00000295549 CRYM-AS1A6NIL9 109 aa17.92■□□□□ 0.46
LINC01116-201ENST00000295549 SLC25A17O43808 307 aa17.92■□□□□ 0.46
LINC01116-201ENST00000295549 HRASP01112 189 aa17.92■□□□□ 0.46
LINC01116-201ENST00000295549 CRYGBP07316 175 aa17.92■□□□□ 0.46
LINC01116-201ENST00000295549 VMA21Q3ZAQ7 101 aa17.92■□□□□ 0.46
LINC01116-201ENST00000295549 LIN54Q6MZP7 749 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms