RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 LPAR2Q9HBW0 351 aa13.12□□□□□ -0.31
SHROOM4-201ENST00000289292 HILPDAQ9Y5L2 63 aa13.12□□□□□ -0.31
SHROOM4-201ENST00000289292 KIAA0100Q14667 2235 aaKnown RBP13.12□□□□□ -0.31
SHROOM4-201ENST00000289292 P2RY6Q15077 328 aa13.12□□□□□ -0.31
SHROOM4-201ENST00000289292 PLXNA1Q9UIW2 1896 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 MARCH11A6NNE9 402 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 CD3EP07766 207 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 SPANXN1Q5VSR9 72 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 GRAMD2BQ96HH9 432 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 M0R3E3 92 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 SNAI2O43623 268 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 TMEM177Q53S58 311 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 ITLN1Q8WWA0 313 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 MTCL1Q9Y4B5 1905 aaKnown RBP13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 A0A0G2JMZ2 1700 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 LRRC37A2A6NM11 1700 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 PROB1E7EW31 1015 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 KLF7O75840 302 aaPredicted RBP13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 MT-ND6P03923 174 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 ZNF506Q5JVG8 444 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 SMRP1Q8NCR6 262 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 RPRMQ9NS64 109 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 KCNMB1Q16558 191 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 SLC25A45Q8N413 288 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 RTN4RQ9BZR6 473 aa13.11□□□□□ -0.31
SHROOM4-201ENST00000289292 TMEM229AB2RXF0 380 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 TIAF1O95411 115 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 KIR2DL2P43627 348 aaPredicted RBP13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 DRAM1Q8N682 238 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 ZNF714Q96N38 554 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 PRR32B1ATL7 298 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 DLX1P56177 255 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 RBPMS2Q6ZRY4 209 aaKnown RBP13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 HERPUD1Q15011 391 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 RAB1BQ9H0U4 201 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 UBTD1Q9HAC8 227 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 HLA-DQA1P01909 254 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 FOLR2P14207 255 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 HOXA5P20719 270 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 MMD2Q8IY49 270 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 RNF126Q9BV68 326 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 RRHO14718 337 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 SRP19P09132 144 aaKnown RBP13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 TMEM54Q969K7 222 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 TMEM45BQ96B21 275 aa13.1□□□□□ -0.31
SHROOM4-201ENST00000289292 A8MWL6 223 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 OR1N2Q8NGR9 330 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 LSM10Q969L4 123 aaKnown RBP13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 RCC1LQ96I51 464 aaKnown RBP13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 F2RL2O00254 374 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 WNT9BO14905 357 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 STXBP6Q8NFX7 210 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 GFI1Q99684 422 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 TMEM208Q9BTX3 173 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 DUSP15Q9H1R2 295 aaPredicted RBP13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 DLL1O00548 723 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 DNPH1O43598 174 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 ZNF735P0CB33 412 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 RND2P52198 227 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 LY6G6FQ5SQ64 297 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 SMIM8Q96KF7 97 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 LTBP4Q8N2S1 1624 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 TDRD6O60522 2096 aaKnown RBP13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 ZNF658BQ4V348 819 aaPredicted RBP13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 HSPB7Q9UBY9 170 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 ZNF729A6NN14 1252 aaPredicted RBP13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 MPV17P39210 176 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 CENPWQ5EE01 88 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 PEAR1Q5VY43 1037 aaPredicted RBP13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 STPG3Q8N7X2 389 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 DNAJC4Q9NNZ3 241 aa13.09□□□□□ -0.31
SHROOM4-201ENST00000289292 CKS2P33552 79 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 RPL39P5Q59GN2 51 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 SCO2A0A1W2PP80 73 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 CDCP2Q5VXM1 449 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 CDX4O14627 284 aaPredicted RBP13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 SLC25A53Q5H9E4 307 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 HIST1H4GQ99525 98 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 PPIAL4EA0A075B759 164 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 PPIAL4DF5H284 164 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 MPDU1O75352 247 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 PPIAL4FP0DN26 164 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 MAS1LP35410 378 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 ARF6P62330 175 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 GUCD1Q96NT3 240 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 WBP1LQ9NX94 342 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 PPIAL4AQ9Y536 164 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 WNK3Q9BYP7 1800 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 EPOPA6NHQ4 379 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 MGST3O14880 152 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 ATP5G3P48201 142 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 RAB1CQ92928 201 aa13.08□□□□□ -0.32
SHROOM4-201ENST00000289292 BRCA1P38398 1863 aaKnown RBP13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 RALGAPA2Q2PPJ7 1873 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 SH2D7A6NKC9 451 aaPredicted RBP13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 GFRA1P56159 465 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 Q5PR19 223 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 ASCL5Q7RTU5 278 aa13.07□□□□□ -0.32
SHROOM4-201ENST00000289292 RABAC1Q9UI14 185 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms