RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 SSTP61278 116 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 GABRA6Q16445 453 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 ACOT6Q3I5F7 207 aaPredicted RBP11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 Q3ZCU0 254 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 FAM78BQ5VT40 261 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 KLF13Q9Y2Y9 288 aaPredicted RBP11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 ZDBF2Q9HCK1 2354 aa11.06□□□□□ -0.64
SLC28A1-201ENST00000286749 DEFB108AA8MXU0 73 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 IQCF6A8MYZ5 107 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 J3QW42 95 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 GCGP01275 180 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 TYMSP04818 313 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 ATP5G3P48201 142 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 UBE2NP61088 152 aaKnown RBP11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 GNB1P62873 340 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 KCNIP4Q6PIL6 250 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 DMRTC2Q8IXT2 367 aaPredicted RBP11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 CISD2Q8N5K1 135 aaKnown RBP11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 RFESDQ8TAC1 157 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 TAAR6Q96RI8 345 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 QTRT1Q9BXR0 403 aaKnown RBP11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 SPRR3Q9UBC9 169 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 TMEM210A6NLX4 147 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 MARCH11A6NNE9 402 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 C15orf62A8K5M9 175 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 ST8SIA5O15466 376 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 MLNRO43193 412 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 LYZL6O75951 148 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 SNRPCP09234 159 aaKnown RBP11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 IL3RAP26951 378 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 CST9LP1Q5W188 147 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 LINC01551Q86U37 167 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 Q8N7P7 452 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 MISP3Q96FF7 219 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 WFIKKN1Q96NZ8 548 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 DERL1Q9BUN8 251 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 METRNQ9UJH8 293 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 PSG11Q9UQ72 335 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 PRRC2CQ9Y520 2896 aaKnown RBP11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 KLRC4-KLRK1H3BQV0 150 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 EDDM3BP56851 147 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 C11orf53Q8IXP5 236 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 MDS2Q8NDY4 140 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 TMEM18Q96B42 140 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 WASF3Q9UPY6 502 aa11.05□□□□□ -0.64
SLC28A1-201ENST00000286749 PRR14LQ5THK1 2151 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 PGPEP1LA6NFU8 196 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 IFNL4K9M1U5 179 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 NDUFB4O95168 129 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 IGHV1-2P23083 117 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 TAS2R60P59551 318 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 RNFT1Q5M7Z0 435 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 PRAMEF6Q5VXH4 476 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 MRPL41Q8IXM3 137 aaKnown RBP11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 OR13A1Q8NGR1 328 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 KLF14Q8TD94 323 aaPredicted RBP11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 NOL4LQ96MY1 436 aaPredicted RBP11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 IL17BQ9UHF5 180 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 TET2Q6N021 2002 aaPredicted RBP11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 OR9G9P0C7N8 305 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 CD82P27701 267 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 CD1BP29016 333 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 SSX2Q16385 188 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 LTC4SQ16873 150 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 ACP7Q6ZNF0 438 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 DIRC2Q96SL1 478 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 WDR83OSQ9Y284 106 aa11.04□□□□□ -0.64
SLC28A1-201ENST00000286749 TRGV5A0A0B4J1U4 118 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 PDE6DO43924 150 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 C1QTNF9P0C862 333 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 CNN1P51911 297 aaKnown RBP11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 USF2Q15853 346 aaPredicted RBP11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 GCNT2Q8N0V5 402 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 TCTEX1D1Q8N7M0 179 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 ZNF114Q8NC26 417 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 R3HDM4Q96D70 268 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 PLPPR2Q96GM1 343 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 DCTN5Q9BTE1 182 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 NDUFAF3Q9BU61 184 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 PATZ1Q9HBE1 687 aaKnown RBP11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 KNTC1P50748 2209 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 A0A0U1RQK1 487 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 ZNF320A2RRD8 509 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 C21orf140B9A014 251 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 HSD17B10Q99714 261 aaKnown RBP11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 C2orf88Q9BSF0 95 aa11.03□□□□□ -0.64
SLC28A1-201ENST00000286749 A0A1W2PPV4 95 aa11.02□□□□□ -0.65
SLC28A1-201ENST00000286749 OR4A8P0C604 315 aa11.02□□□□□ -0.65
SLC28A1-201ENST00000286749 RPL15P61313 204 aaKnown RBP11.02□□□□□ -0.65
SLC28A1-201ENST00000286749 LCN2P80188 198 aa11.02□□□□□ -0.65
SLC28A1-201ENST00000286749 GBGT1Q8N5D6 347 aa11.02□□□□□ -0.65
SLC28A1-201ENST00000286749 SDSLQ96GA7 329 aa11.02□□□□□ -0.65
SLC28A1-201ENST00000286749 KCNIP2Q9NS61 270 aa11.02□□□□□ -0.65
SLC28A1-201ENST00000286749 FZR1Q9UM11 496 aa11.02□□□□□ -0.65
SLC28A1-201ENST00000286749 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.02□□□□□ -0.65
SLC28A1-201ENST00000286749 A0A1B0GUS0 222 aa11.02□□□□□ -0.65
SLC28A1-201ENST00000286749 TMPRSS2O15393 492 aa11.02□□□□□ -0.65
SLC28A1-201ENST00000286749 ARG2P78540 354 aa11.02□□□□□ -0.65
SLC28A1-201ENST00000286749 TGFBR3Q03167 851 aa11.02□□□□□ -0.65
SLC28A1-201ENST00000286749 FOXF2Q12947 444 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms